Regulon of TPP in Oceanicola granulosus HTCC2516
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Rhodobacterales |
| Under regulation: | |
| - Genes | 7 |
| - Operons | 2 |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -99
Score: 65.6 Sequence: CGAACATAACCGGGG...
Locus tag: OG2516_13249
Name: ykoF Funciton: Additional substrate-binding component of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: OG2516_13244
Name: thiX2 Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component
Locus tag: OG2516_13239
Name: thiZ2 Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component
Locus tag: OG2516_13234
Name: thiY2 Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component |
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ykoF
|
Additional substrate-binding component of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
|
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thiX2
|
Hydroxymethylpyrimidine ABC transporter, transmembrane component
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thiZ2
|
Hydroxymethylpyrimidine ABC transporter, ATPase component
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thiY2
|
Hydroxymethylpyrimidine ABC transporter, substrate-binding component
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Position: -125
Score: 67.4 Sequence: GCCCCACCTCGGGGT...
Locus tag: OG2516_10591
Name: thiB Funciton: Thiamin ABC transporter, substrate-binding component
Locus tag: OG2516_10596
Name: thiP Funciton: Thiamin ABC transporter, transmembrane component
Locus tag: OG2516_10601
Name: thiQ Funciton: Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ |
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thiB
|
Thiamin ABC transporter, substrate-binding component
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thiP
|
Thiamin ABC transporter, transmembrane component
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thiQ
|
Thiamin ABC transporter, ATPase component / Thiamine transport ATP-binding protein thiQ
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |