Regulon of TPP in Paracoccus denitrificans PD1222

Properties
Regulator type:	RNA regulatory element
Name:	TPP
RFAM:	RF00059
Regulation mode:
Biological process:	Thiamine biosynthesis
Effector:	Thiamine pyrophosphate
Regulog:	TPP - Rhodobacterales
Under regulation:
- Genes	12
- Operons	3

Member of regulog collections

By taxonomy - Rhodobacterales
By RNA motif - TPP
By effector - Thiamine pyrophosphate
By pathway - Thiamine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -196 Score: 52.9 Sequence: GCGCCACCAAGGGGA... Locus tag: Pden_3673 Name: tenA Funciton: Thiaminase II (EC 3.5.99.2)
	Pden_3673	tenA	Thiaminase II (EC 3.5.99.2)
Position: -253 Score: 51 Sequence: CCTCACGTCAGGGGA... Locus tag: Pden_2944 Name: thiC Funciton: Thiamin biosynthesis protein ThiC
	Pden_2944	thiC	Thiamin biosynthesis protein ThiC
Position: -145 Score: 82.4 Sequence: ACTCATACACTTGGG... Locus tag: Pden_0042 Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) Locus tag: Pden_0041 Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19) Locus tag: Pden_0040 Name: thiS Funciton: Sulfur carrier protein ThiS Locus tag: Pden_0039 Name: thiG Funciton: Thiazole biosynthesis protein ThiG Locus tag: Pden_0038 Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) Locus tag: Pden_0037 Name: thiF Funciton: Thiamine biosynthesis protein ThiF Locus tag: Pden_0036 Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component Locus tag: Pden_0035 Name: tenA Funciton: Thiaminase II (EC 3.5.99.2) Locus tag: Pden_0034 Name: thiZ Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component Locus tag: Pden_0033 Name: thiX Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component
	Pden_0042	thiD	Phosphomethylpyrimidine kinase (EC 2.7.4.7)
	Pden_0041	thiO	Glycine oxidase ThiO (EC 1.4.3.19)
	Pden_0040	thiS	Sulfur carrier protein ThiS
	Pden_0039	thiG	Thiazole biosynthesis protein ThiG
	Pden_0038	thiE	Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
	Pden_0037	thiF	Thiamine biosynthesis protein ThiF
	Pden_0036	thiY	Hydroxymethylpyrimidine ABC transporter, substrate-binding component
	Pden_0035	tenA	Thiaminase II (EC 3.5.99.2)
	Pden_0034	thiZ	Hydroxymethylpyrimidine ABC transporter, ATPase component
	Pden_0033	thiX	Hydroxymethylpyrimidine ABC transporter, transmembrane component

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD