Regulon of TPP in Paracoccus denitrificans PD1222
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Rhodobacterales |
| Under regulation: | |
| - Genes | 12 |
| - Operons | 3 |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -196
Score: 52.9 Sequence: GCGCCACCAAGGGGA...
Locus tag: Pden_3673
Name: tenA Funciton: Thiaminase II (EC 3.5.99.2) |
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tenA
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Thiaminase II (EC 3.5.99.2)
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Position: -253
Score: 51 Sequence: CCTCACGTCAGGGGA...
Locus tag: Pden_2944
Name: thiC Funciton: Thiamin biosynthesis protein ThiC |
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thiC
|
Thiamin biosynthesis protein ThiC
|
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Position: -145
Score: 82.4 Sequence: ACTCATACACTTGGG...
Locus tag: Pden_0042
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: Pden_0041
Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: Pden_0040
Name: thiS Funciton: Sulfur carrier protein ThiS
Locus tag: Pden_0039
Name: thiG Funciton: Thiazole biosynthesis protein ThiG
Locus tag: Pden_0038
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: Pden_0037
Name: thiF Funciton: Thiamine biosynthesis protein ThiF
Locus tag: Pden_0036
Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component
Locus tag: Pden_0035
Name: tenA Funciton: Thiaminase II (EC 3.5.99.2)
Locus tag: Pden_0034
Name: thiZ Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component
Locus tag: Pden_0033
Name: thiX Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component |
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thiD
|
Phosphomethylpyrimidine kinase (EC 2.7.4.7)
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thiO
|
Glycine oxidase ThiO (EC 1.4.3.19)
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thiS
|
Sulfur carrier protein ThiS
|
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thiG
|
Thiazole biosynthesis protein ThiG
|
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thiE
|
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
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thiF
|
Thiamine biosynthesis protein ThiF
|
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thiY
|
Hydroxymethylpyrimidine ABC transporter, substrate-binding component
|
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tenA
|
Thiaminase II (EC 3.5.99.2)
|
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thiZ
|
Hydroxymethylpyrimidine ABC transporter, ATPase component
|
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thiX
|
Hydroxymethylpyrimidine ABC transporter, transmembrane component
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |