Regulon of Cobalamin in Roseobacter sp. MED193

Properties
Regulator type:	RNA regulatory element
Name:	Cobalamin
RFAM:	RF00174
Regulation mode:
Biological process:	Cobalamin biosynthesis
Effector:	Adenosylcobalamin
Regulog:	Cobalamin - Rhodobacterales
Under regulation:
- Genes	14
- Operons	4

Member of regulog collections

By taxonomy - Rhodobacterales
By RNA motif - Cobalamin
By effector - Adenosylcobalamin
By pathway - Cobalamin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -280 Score: 126.3 Sequence: AGAGCAGTGACCTAT... Locus tag: MED193_19549 Name: cbtC Funciton: Predicted cobalt transporter CbtC Locus tag: MED193_19544 Name: cobF Funciton: Precorrin-6A synthase (EC 2.1.1.152)
	MED193_19549	cbtC	Predicted cobalt transporter CbtC
	MED193_19544	cobF	Precorrin-6A synthase (EC 2.1.1.152)
Position: -216 Score: 93.5 Sequence: GCGCAAGGGGGTTTT... Locus tag: MED193_19614 Name: cfrX Funciton: Predicted metal-binding protein Locus tag: MED193_19609 Name: cobW Funciton: CobW GTPase involved in cobalt insertion for B12 biosynthesis Locus tag: MED193_19604 Name: cobN Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis Locus tag: MED193_19599 Name: null Funciton: Cobalamin biosynthesis protein CobG Locus tag: MED193_19594 Name: cbiC Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2) Locus tag: MED193_19589 Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130) Locus tag: MED193_19584 Name: cbiH Funciton: Cobalt-precorrin-3b C17-methyltransferase
	MED193_19614	cfrX	Predicted metal-binding protein
	MED193_19609	cobW	CobW GTPase involved in cobalt insertion for B12 biosynthesis
	MED193_19604	cobN	CobN component of cobalt chelatase involved in B12 biosynthesis
	MED193_19599		Cobalamin biosynthesis protein CobG
	MED193_19594	cbiC	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
	MED193_19589	cbiL	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
	MED193_19584	cbiH	Cobalt-precorrin-3b C17-methyltransferase
Position: -303 Score: 112 Sequence: TCTAAACGGCAAGAG... Locus tag: MED193_18509 Name: btuF Funciton: ABC transporter (iron.B12.siderophore.hemin) , periplasmic substrate-binding component Locus tag: MED193_18514 Name: btuC Funciton: ABC transporter (iron.B12.siderophore.hemin) , permease component Locus tag: MED193_18519 Name: btuD Funciton: ABC transporter (iron.B12.siderophore.hemin) , ATP-binding component Locus tag: MED193_18524 Name: petE Funciton: Pseudoazurin precursor
	MED193_18509	btuF	ABC transporter (iron.B12.siderophore.hemin) , periplasmic substrate-binding component
	MED193_18514	btuC	ABC transporter (iron.B12.siderophore.hemin) , permease component
	MED193_18519	btuD	ABC transporter (iron.B12.siderophore.hemin) , ATP-binding component
	MED193_18524	petE	Pseudoazurin precursor
Position: -441 Score: 123.2 Sequence: ATAGCCGTGTAACGG... Locus tag: MED193_11852 Name: RSP_0787 Funciton: hypothetical protein
	MED193_11852	RSP_0787	hypothetical protein

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD