Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Cobalamin in Silicibacter pomeroyi DSS-3

Properties
Regulator type: RNA regulatory element
Name: Cobalamin
RFAM: RF00174
Regulation mode:
Biological process: Cobalamin biosynthesis
Effector: Adenosylcobalamin
Regulog: Cobalamin - Rhodobacterales
Under regulation:
- Genes 11
- Operons 3
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -292
Score: 81.8
Sequence: CGCATGTCCGCCCTG...
Locus tag: SPO2861
Name: cfrX
Funciton: Predicted metal-binding protein
Locus tag: SPO2862
Name: cobW
Funciton: CobW GTPase involved in cobalt insertion for B12 biosynthesis
Locus tag: SPO2863
Name: cobN
Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis
Locus tag: SPO2864
Name: cobG
Funciton: Cobalamin biosynthesis protein CobG
Locus tag: SPO2865
Name: cbiC
Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: SPO2866
Name: cbiL
Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: SPO2867
Name: cbiH
Funciton: Cobalt-precorrin-3b C17-methyltransferase
cfrX
Predicted metal-binding protein
cobW
CobW GTPase involved in cobalt insertion for B12 biosynthesis
cobN
CobN component of cobalt chelatase involved in B12 biosynthesis
cobG
Cobalamin biosynthesis protein CobG
cbiC
Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
cbiL
Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
cbiH
Cobalt-precorrin-3b C17-methyltransferase

Position: -222
Score: 119.1
Sequence: GCTAAATGAAGGGGT...
Locus tag: SPO2875
Name: cbtB
Funciton: Putative cobalt transporter, subunit CbtB
Locus tag: SPO2876
Name: cbtA
Funciton: Predicted cobalt transporter CbtA
Locus tag: SPO2877
Name: Pden_2526
Funciton: hypothetical protein
cbtB
Putative cobalt transporter, subunit CbtB
cbtA
Predicted cobalt transporter CbtA
Pden_2526
hypothetical protein

Position: -251
Score: 120.6
Sequence: GCTACCGCTGGGTCG...
Locus tag: SPO3547
Name: RSP_0787
Funciton: hypothetical protein
RSP_0787
hypothetical protein
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD