Regulon of Cobalamin in Roseovarius nubinhibens ISM

Properties
Regulator type:	RNA regulatory element
Name:	Cobalamin
RFAM:	RF00174
Regulation mode:
Biological process:	Cobalamin biosynthesis
Effector:	Adenosylcobalamin
Regulog:	Cobalamin - Rhodobacterales
Under regulation:
- Genes	14
- Operons	4

Member of regulog collections

By taxonomy - Rhodobacterales
By RNA motif - Cobalamin
By effector - Adenosylcobalamin
By pathway - Cobalamin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -321 Score: 128 Sequence: GCATTGTCGCCCCTG... Locus tag: ISM_12600 Name: cfrX Funciton: Predicted metal-binding protein Locus tag: ISM_12605 Name: cobW Funciton: CobW GTPase involved in cobalt insertion for B12 biosynthesis Locus tag: ISM_12610 Name: cobN Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis Locus tag: ISM_12615 Name: cobG Funciton: Cobalamin biosynthesis protein CobG Locus tag: ISM_12620 Name: cbiC Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2) Locus tag: ISM_12625 Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130) Locus tag: ISM_12630 Name: cbiH Funciton: Cobalt-precorrin-3b C17-methyltransferase
	ISM_12600	cfrX	Predicted metal-binding protein
	ISM_12605	cobW	CobW GTPase involved in cobalt insertion for B12 biosynthesis
	ISM_12610	cobN	CobN component of cobalt chelatase involved in B12 biosynthesis
	ISM_12615	cobG	Cobalamin biosynthesis protein CobG
	ISM_12620	cbiC	Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
	ISM_12625	cbiL	Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
	ISM_12630	cbiH	Cobalt-precorrin-3b C17-methyltransferase
Position: -341 Score: 104.7 Sequence: TAGGCTAAAGCTCTC... Locus tag: ISM_13370 Name: ISM_13370 Funciton: hypothetical protein
	ISM_13370	ISM_13370	hypothetical protein
Position: -322 Score: 109.4 Sequence: CGGGTGTCACTGCGG... Locus tag: ISM_07745 Name: btuF Funciton: ABC transporter (iron.B12.siderophore.hemin) , periplasmic substrate-binding component Locus tag: ISM_07740 Name: btuC Funciton: ABC transporter (iron.B12.siderophore.hemin) , permease component Locus tag: ISM_07735 Name: btuD Funciton: ABC transporter (iron.B12.siderophore.hemin) , ATP-binding component Locus tag: ISM_07730 Name: petE Funciton: Pseudoazurin precursor
	ISM_07745	btuF	ABC transporter (iron.B12.siderophore.hemin) , periplasmic substrate-binding component
	ISM_07740	btuC	ABC transporter (iron.B12.siderophore.hemin) , permease component
	ISM_07735	btuD	ABC transporter (iron.B12.siderophore.hemin) , ATP-binding component
	ISM_07730	petE	Pseudoazurin precursor
Position: -235 Score: 117.5 Sequence: ATCTCCTTCCATTCG... Locus tag: ISM_12665 Name: cbtC Funciton: Predicted cobalt transporter CbtC Locus tag: ISM_12670 Name: cobF Funciton: Precorrin-6A synthase (EC 2.1.1.152)
	ISM_12665	cbtC	Predicted cobalt transporter CbtC
	ISM_12670	cobF	Precorrin-6A synthase (EC 2.1.1.152)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD