Regulon of Cobalamin in Roseovarius nubinhibens ISM
| Regulator type: | RNA regulatory element |
| Name: | Cobalamin |
| RFAM: | RF00174 |
| Regulation mode: | |
| Biological process: | Cobalamin biosynthesis |
| Effector: | Adenosylcobalamin |
| Regulog: | Cobalamin - Rhodobacterales |
| Under regulation: | |
| - Genes | 14 |
| - Operons | 4 |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By RNA motif - Cobalamin
- By effector - Adenosylcobalamin
- By pathway - Cobalamin biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -321
Score: 128 Sequence: GCATTGTCGCCCCTG...
Locus tag: ISM_12600
Name: cfrX Funciton: Predicted metal-binding protein
Locus tag: ISM_12605
Name: cobW Funciton: CobW GTPase involved in cobalt insertion for B12 biosynthesis
Locus tag: ISM_12610
Name: cobN Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis
Locus tag: ISM_12615
Name: cobG Funciton: Cobalamin biosynthesis protein CobG
Locus tag: ISM_12620
Name: cbiC Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: ISM_12625
Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: ISM_12630
Name: cbiH Funciton: Cobalt-precorrin-3b C17-methyltransferase |
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cfrX
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Predicted metal-binding protein
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cobW
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CobW GTPase involved in cobalt insertion for B12 biosynthesis
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cobN
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CobN component of cobalt chelatase involved in B12 biosynthesis
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cobG
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Cobalamin biosynthesis protein CobG
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cbiC
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Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
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cbiL
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Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
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cbiH
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Cobalt-precorrin-3b C17-methyltransferase
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Position: -341
Score: 104.7 Sequence: TAGGCTAAAGCTCTC...
Locus tag: ISM_13370
Name: ISM_13370 Funciton: hypothetical protein |
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ISM_13370
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hypothetical protein
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Position: -322
Score: 109.4 Sequence: CGGGTGTCACTGCGG...
Locus tag: ISM_07745
Name: btuF Funciton: ABC transporter (iron.B12.siderophore.hemin) , periplasmic substrate-binding component
Locus tag: ISM_07740
Name: btuC Funciton: ABC transporter (iron.B12.siderophore.hemin) , permease component
Locus tag: ISM_07735
Name: btuD Funciton: ABC transporter (iron.B12.siderophore.hemin) , ATP-binding component
Locus tag: ISM_07730
Name: petE Funciton: Pseudoazurin precursor |
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btuF
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ABC transporter (iron.B12.siderophore.hemin) , periplasmic substrate-binding component
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btuC
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ABC transporter (iron.B12.siderophore.hemin) , permease component
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btuD
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ABC transporter (iron.B12.siderophore.hemin) , ATP-binding component
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petE
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Pseudoazurin precursor
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Position: -235
Score: 117.5 Sequence: ATCTCCTTCCATTCG...
Locus tag: ISM_12665
Name: cbtC Funciton: Predicted cobalt transporter CbtC
Locus tag: ISM_12670
Name: cobF Funciton: Precorrin-6A synthase (EC 2.1.1.152) |
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cbtC
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Predicted cobalt transporter CbtC
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cobF
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Precorrin-6A synthase (EC 2.1.1.152)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |