Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Crp in Bacteroides vulgatus ATCC 8482

Properties
Regulator type: Transcription factor
TF locus tag: BVU_3580
Regulator family: CRP
Regulation mode: activator
Biological process:
Effector:
Regulog: Crp - Bacteroidaceae
Statistics of regulated genes:
- Genes 24
- Operons 10
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 113 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -35
Score: 4.1
Sequence: ATTTGTGCTCTATAACACGGTT
Locus tag: BVU_3580
Name: crp
Funciton: transcriptional regulator, Crp/Fnr family
BVU_3580
crp
transcriptional regulator, Crp/Fnr family
Position: -340
Score: 4.9
Sequence: AGATATGTTCAACAACATAGCA
Locus tag: BVU_0299
Name: susC_Crp-2
Funciton: putative outer membrane protein, probably involved in nutrient binding
Locus tag: BVU_0300
Name: susD_Crp-2
Funciton: Outer membrane polysaccharide binding protein for oligosaccharides
BVU_0299
susC_Crp-2
putative outer membrane protein, probably involved in nutrient binding
BVU_0300
susD_Crp-2
Outer membrane polysaccharide binding protein for oligosaccharides
Position: -104
Score: 4.6
Sequence: AAAAGTGTTGAATAACATAATT
Locus tag: BVU_3908
Name: PF09719
Funciton: Putative redox-active protein (C_GCAxxG_C_C)
BVU_3908
PF09719
Putative redox-active protein (C_GCAxxG_C_C)
Position: -104
Score: 5.6
Sequence: TTTTATGTTGCACAACATACTC
Locus tag: BVU_2324
Name: araM
Funciton: Aldose 1-epimerase (EC 5.1.3.3), L-arabinose mutarotase
Locus tag: BVU_2323
Name: araP
Funciton: Predicted sodium-dependent arabinose transporter
Locus tag: BVU_2322
Name: araR
Funciton: Predicted transcriptional regulator for arabinose utilization, NrtR family
Locus tag: BVU_2321
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: BVU_2320
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: BVU_2319
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
BVU_2324
araM
Aldose 1-epimerase (EC 5.1.3.3), L-arabinose mutarotase
BVU_2323
araP
Predicted sodium-dependent arabinose transporter
BVU_2322
araR
Predicted transcriptional regulator for arabinose utilization, NrtR family
BVU_2321
araD
L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
BVU_2320
araA
L-arabinose isomerase (EC 5.3.1.4)
BVU_2319
araB
Ribulokinase (EC 2.7.1.16)
Position: -58
Score: 5.4
Sequence: AGATATGCTGAAAAACATATAA
Locus tag: BVU_2487
Name: PF10438
Funciton: Cyclo-malto-dextrinase C-terminal domain, involved in stabilisation of acitve sites
BVU_2487
PF10438
Cyclo-malto-dextrinase C-terminal domain, involved in stabilisation of acitve sites
Position: -33
Score: 4.5
Sequence: TTTTAGGTTTAACAAATTAAAA
Locus tag: BVU_2553
Name: null
Funciton: hypothetical protein
BVU_2553
hypothetical protein
Position: -100
Score: 4.5
Sequence: AATAGTGTTTTGGAACATAATA
Locus tag: BVU_3955
Name: xylR
Funciton: Predicted regulator of xylose utilization, NrtR family
Locus tag: BVU_3954
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: BVU_3953
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
BVU_3955
xylR
Predicted regulator of xylose utilization, NrtR family
BVU_3954
xylB
Xylulose kinase (EC 2.7.1.17)
BVU_3953
xylA
Xylose isomerase (EC 5.3.1.5)
Position: -114
Score: 5
Sequence: TCTTGTGTTATAAAACATACCT
Locus tag: BVU_1374
Name: fucR
Funciton: Transcriptional regulator of fucose utilization, GntR family
Locus tag: BVU_1373
Name: fucI
Funciton: L-fucose isomerase (EC 5.3.1.25)
Locus tag: BVU_1372
Name: fucP
Funciton: L-fucose permease
BVU_1374
fucR
Transcriptional regulator of fucose utilization, GntR family
BVU_1373
fucI
L-fucose isomerase (EC 5.3.1.25)
BVU_1372
fucP
L-fucose permease
Position: -71
Score: 6.2
Sequence: TTTTCTGTTATATAACAGAATA
Locus tag: BVU_0995
Name: PF01694
Funciton: Peptidase S54, rhomboid domain
Locus tag: BVU_0994
Name: PF01694
Funciton: Peptidase S54, rhomboid domain
Locus tag: BVU_0993
Name: PF03372
Funciton: Endonuclease/exonuclease/phosphatase
Locus tag: BVU_0992
Name: PF01432
Funciton: Peptidase M3A/M3B, thimet/oligopeptidase F
Locus tag: BVU_0991
Name: secDF
Funciton: Preprotein translocase subunits SecD-SecF
BVU_0995
PF01694
Peptidase S54, rhomboid domain
BVU_0994
PF01694
Peptidase S54, rhomboid domain
BVU_0993
PF03372
Endonuclease/exonuclease/phosphatase
BVU_0992
PF01432
Peptidase M3A/M3B, thimet/oligopeptidase F
BVU_0991
secDF
Preprotein translocase subunits SecD-SecF
Position: -116
Score: 6.1
Sequence: AAATATGTTATATAGCATAAAA
Locus tag: BVU_3158
Name: serB
Funciton: Phosphoserine phosphatase (EC 3.1.3.3)
BVU_3158
serB
Phosphoserine phosphatase (EC 3.1.3.3)
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