Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Crp in Bacteroides ovatus ATCC 8483

Properties
Regulator type: Transcription factor
TF locus tag: BACOVA_05152
Regulator family: CRP
Regulation mode: activator
Biological process:
Effector:
Regulog: Crp - Bacteroidaceae
Statistics of regulated genes:
- Genes 31
- Operons 11
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 113 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -162
Score: 5.3
Sequence: TCTTATGTTTAACAACATGTAT
Locus tag: BACOVA_00860
Name: uxuR
Funciton: Predicted transcriptional regulator for glucuronate catabolism, LacI family
Locus tag: BACOVA_00859
Name: uxuB
Funciton: D-mannonate oxidoreductase (EC 1.1.1.57)
Locus tag: BACOVA_00858
Name: uxuA
Funciton: Mannonate dehydratase (EC 4.2.1.8)
BACOVA_00860
uxuR
Predicted transcriptional regulator for glucuronate catabolism, LacI family
BACOVA_00859
uxuB
D-mannonate oxidoreductase (EC 1.1.1.57)
BACOVA_00858
uxuA
Mannonate dehydratase (EC 4.2.1.8)
Position: -33
Score: 4.8
Sequence: TTTTGTGCTGTATAACACAGTT
Locus tag: BACOVA_05152
Name: crp
Funciton: transcriptional regulator, Crp/Fnr family
BACOVA_05152
crp
transcriptional regulator, Crp/Fnr family
Position: -107
Score: 5.3
Sequence: TAAAGTGTTATATAACATAAAA
Locus tag: BACOVA_02257
Name: PF09719
Funciton: Putative redox-active protein (C_GCAxxG_C_C)
BACOVA_02257
PF09719
Putative redox-active protein (C_GCAxxG_C_C)
Position: -135
Score: 5.8
Sequence: TTTTATGCTATAAAACATATTC
Locus tag: BACOVA_03166
Name: null
Funciton: hypothetical protein
BACOVA_03166
hypothetical protein
Position: -100
Score: 5.8
Sequence: TTTTCTGCTATAAAACATATCA
Locus tag: BACOVA_03849
Name: fucR
Funciton: Transcriptional regulator of fucose utilization, GntR family
Locus tag: BACOVA_03850
Name: fucI
Funciton: L-fucose isomerase (EC 5.3.1.25)
Locus tag: BACOVA_03851
Name: fucA
Funciton: L-fuculose phosphate aldolase (EC 4.1.2.17)
Locus tag: BACOVA_03852
Name: fucK
Funciton: L-fuculokinase (EC 2.7.1.51)
Locus tag: BACOVA_03853
Name: fucU
Funciton: Possible alternative L-fucose mutarotase
Locus tag: BACOVA_03854
Name: fucP
Funciton: L-fucose permease
BACOVA_03849
fucR
Transcriptional regulator of fucose utilization, GntR family
BACOVA_03850
fucI
L-fucose isomerase (EC 5.3.1.25)
BACOVA_03851
fucA
L-fuculose phosphate aldolase (EC 4.1.2.17)
BACOVA_03852
fucK
L-fuculokinase (EC 2.7.1.51)
BACOVA_03853
fucU
Possible alternative L-fucose mutarotase
BACOVA_03854
fucP
L-fucose permease
Position: -80
Score: 4.2
Sequence: AACAATGTTTTATAGCATGTTT
Locus tag: BACOVA_02532
Name: xylR
Funciton: Predicted regulator of xylose utilization, NrtR family
Locus tag: BACOVA_02533
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: BACOVA_02534
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: BACOVA_02535
Name: xylE
Funciton: D-xylose proton-symporter XylE
BACOVA_02532
xylR
Predicted regulator of xylose utilization, NrtR family
BACOVA_02533
xylB
Xylulose kinase (EC 2.7.1.17)
BACOVA_02534
xylA
Xylose isomerase (EC 5.3.1.5)
BACOVA_02535
xylE
D-xylose proton-symporter XylE
Position: -105
Score: 5.9
Sequence: ATTTATGCTGCACAACATATAA
Locus tag: BACOVA_01715
Name: araM
Funciton: Aldose 1-epimerase (EC 5.1.3.3), L-arabinose mutarotase
Locus tag: BACOVA_01714
Name: araP
Funciton: Predicted sodium-dependent arabinose transporter
Locus tag: BACOVA_01713
Name: araR
Funciton: Predicted transcriptional regulator for arabinose utilization, NrtR family
Locus tag: BACOVA_01712
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: BACOVA_01711
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: BACOVA_01710
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
BACOVA_01715
araM
Aldose 1-epimerase (EC 5.1.3.3), L-arabinose mutarotase
BACOVA_01714
araP
Predicted sodium-dependent arabinose transporter
BACOVA_01713
araR
Predicted transcriptional regulator for arabinose utilization, NrtR family
BACOVA_01712
araD
L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
BACOVA_01711
araA
L-arabinose isomerase (EC 5.3.1.4)
BACOVA_01710
araB
Ribulokinase (EC 2.7.1.16)
Position: -269
Score: 5.6
Sequence: CATTATGTTGTATAACATAAAC
Locus tag: BACOVA_05132
Name: nupG
Funciton: Nucleoside permease NupG
BACOVA_05132
nupG
Nucleoside permease NupG
Position: -195
Score: 5
Sequence: ATATATGTTACACAAAAGATTA
Position: -66
Score: 5.4
Sequence: TTTCATGCTTTAAAACAGAATT
Locus tag: BACOVA_02079
Name: PF01694
Funciton: Peptidase S54, rhomboid domain
Locus tag: BACOVA_02080
Name: PF01694
Funciton: Peptidase S54, rhomboid domain
Locus tag: BACOVA_02081
Name: PF03372
Funciton: Endonuclease/exonuclease/phosphatase
Locus tag: BACOVA_02082
Name: PF01432
Funciton: Peptidase M3A/M3B, thimet/oligopeptidase F
Locus tag: BACOVA_02083
Name: secDF
Funciton: Preprotein translocase subunits SecD-SecF
BACOVA_02079
PF01694
Peptidase S54, rhomboid domain
BACOVA_02080
PF01694
Peptidase S54, rhomboid domain
BACOVA_02081
PF03372
Endonuclease/exonuclease/phosphatase
BACOVA_02082
PF01432
Peptidase M3A/M3B, thimet/oligopeptidase F
BACOVA_02083
secDF
Preprotein translocase subunits SecD-SecF
Position: -66
Score: 6.3
Sequence: TTTTATGTTATTTAGCATAAAA
Locus tag: BACOVA_02567
Name: serB
Funciton: Phosphoserine phosphatase (EC 3.1.3.3)
BACOVA_02567
serB
Phosphoserine phosphatase (EC 3.1.3.3)
Position: -113
Score: 6.1
Sequence: TTTTATGTTGAAAAGCATAAAA
Locus tag: BACOVA_05597
Name: pflB
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
Locus tag: BACOVA_05596
Name: pflA
Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
BACOVA_05597
pflB
Pyruvate formate-lyase (EC 2.3.1.54)
BACOVA_05596
pflA
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
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