Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Crp in Bacteroides fragilis NCTC 9343

Properties
Regulator type: Transcription factor
TF locus tag: BF0954
Regulator family: CRP
Regulation mode: activator
Biological process:
Effector:
Regulog: Crp - Bacteroidaceae
Statistics of regulated genes:
- Genes 26
- Operons 11
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 113 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -107
Score: 6.3
Sequence: TTTTATGCTATTCAACATAAAA
Locus tag: BF1323
Name: pflB
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
Locus tag: BF1322
Name: pflA
Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
BF1323
pflB
Pyruvate formate-lyase (EC 2.3.1.54)
BF1322
pflA
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Position: -162
Score: 5.4
Sequence: TTCTATGTTATTAGACATAAAA
Locus tag: BF0594
Name: susC_Crp-4
Funciton: TonB-dependent outer membrane transporter of oligosaccharides
Locus tag: BF0595
Name: susD_Crp-4
Funciton: Outer membrane polysaccharide binding protein for oligosaccharides
BF0594
susC_Crp-4
TonB-dependent outer membrane transporter of oligosaccharides
BF0595
susD_Crp-4
Outer membrane polysaccharide binding protein for oligosaccharides
Position: -33
Score: 4.6
Sequence: ATTTGTGCTTTATAACACAGTT
Locus tag: BF0954
Name: crp
Funciton: transcriptional regulator, Crp/Fnr family
Locus tag: BF0953
Name: hex
Funciton: Beta-hexosaminidase (EC 3.2.1.52)
BF0954
crp
transcriptional regulator, Crp/Fnr family
BF0953
hex
Beta-hexosaminidase (EC 3.2.1.52)
Position: -143
Score: 5.7
Sequence: GTATATGTTTTGTAACATAATA
Locus tag: BF0316
Name: COG3533
Funciton: Six-hairpin glycosidase-like, COG3533 family
Locus tag: BF0317
Name: BF0317
Funciton: Alpha-N-arabinofuranosidase (EC 3.2.1.55)
Locus tag: BF0318
Name: BF0318
Funciton: Alpha-rhamnosidase
BF0316
COG3533
Six-hairpin glycosidase-like, COG3533 family
BF0317
BF0317
Alpha-N-arabinofuranosidase (EC 3.2.1.55)
BF0318
BF0318
Alpha-rhamnosidase
Position: -99
Score: 5.9
Sequence: TAATCTGTTATATAACATAATT
Locus tag: BF2582
Name: PF09719
Funciton: Putative redox-active protein (C_GCAxxG_C_C)
BF2582
PF09719
Putative redox-active protein (C_GCAxxG_C_C)
Position: -71
Score: 6.2
Sequence: TTTTATGTTATTTAGCATAAAT
Locus tag: BF2389
Name: serB
Funciton: Phosphoserine phosphatase (EC 3.1.3.3)
BF2389
serB
Phosphoserine phosphatase (EC 3.1.3.3)
Position: -90
Score: 5.7
Sequence: TATTATGTTACAAAACATATAC
Locus tag: BF0315
Name: BT1272
Funciton: Transcriptional regulator, GntR family
BF0315
BT1272
Transcriptional regulator, GntR family
Position: -151
Score: 6
Sequence: TTTTATGTTGAATAACATATTT
Locus tag: BF3646
Name: null
Funciton: hypothetical protein
BF3646
hypothetical protein
Position: -227
Score: 5
Sequence: ATATATGTTACACAAAAGATAT
Position: -105
Score: 5.7
Sequence: TTTTCTGTTGTAGAACAGAATT
Locus tag: BF4221
Name: PF01694
Funciton: Peptidase S54, rhomboid domain
Locus tag: BF4222
Name: PF01694
Funciton: Peptidase S54, rhomboid domain
Locus tag: BF4223
Name: PF03372
Funciton: Endonuclease/exonuclease/phosphatase
BF4221
PF01694
Peptidase S54, rhomboid domain
BF4222
PF01694
Peptidase S54, rhomboid domain
BF4223
PF03372
Endonuclease/exonuclease/phosphatase
Position: -81
Score: 4.6
Sequence: AACAATGCTTTATAGCATATTA
Locus tag: BF2354
Name: xylR
Funciton: Predicted regulator of xylose utilization, NrtR family
Locus tag: BF2355
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: BF2356
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: BF2357
Name: xylE
Funciton: D-xylose proton-symporter XylE
BF2354
xylR
Predicted regulator of xylose utilization, NrtR family
BF2355
xylB
Xylulose kinase (EC 2.7.1.17)
BF2356
xylA
Xylose isomerase (EC 5.3.1.5)
BF2357
xylE
D-xylose proton-symporter XylE
Position: -114
Score: 5.6
Sequence: TTTGATGTTGTATAACATACCA
Locus tag: BF0210
Name: fucR
Funciton: Transcriptional regulator of fucose utilization, GntR family
Locus tag: BF0211
Name: fucI
Funciton: L-fucose isomerase (EC 5.3.1.25)
Locus tag: BF0212
Name: fucO
Funciton: Lactaldehyde reductase (EC 1.1.1.77)
Locus tag: BF0213
Name: fucA
Funciton: L-fuculose phosphate aldolase (EC 4.1.2.17)
Locus tag: BF0214
Name: fucK
Funciton: L-fuculokinase (EC 2.7.1.51)
Locus tag: BF0215
Name: fucP
Funciton: L-fucose permease
BF0210
fucR
Transcriptional regulator of fucose utilization, GntR family
BF0211
fucI
L-fucose isomerase (EC 5.3.1.25)
BF0212
fucO
Lactaldehyde reductase (EC 1.1.1.77)
BF0213
fucA
L-fuculose phosphate aldolase (EC 4.1.2.17)
BF0214
fucK
L-fuculokinase (EC 2.7.1.51)
BF0215
fucP
L-fucose permease
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