Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Crp in Bacteroides eggerthii DSM 20697

Properties
Regulator type: Transcription factor
TF locus tag: BACEGG_01340
Regulator family: CRP
Regulation mode: activator
Biological process:
Effector:
Regulog: Crp - Bacteroidaceae
Statistics of regulated genes:
- Genes 26
- Operons 11
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 113 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -129
Score: 5.5
Sequence: TTTTGTGTTATAAAACATATTC
Locus tag: BACEGG_00156
Name: null
Funciton: hypothetical protein
BACEGG_00156
hypothetical protein
Position: -4
Score: 6.1
Sequence: TTTTATGTTCTTCAGCATAAAA
Locus tag: BACEGG_01611
Name: pflB
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
Locus tag: BACEGG_01610
Name: pflA
Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
BACEGG_01611
pflB
Pyruvate formate-lyase (EC 2.3.1.54)
BACEGG_01610
pflA
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Position: -33
Score: 4.6
Sequence: ATTTGTGCTGTACAACACAGTT
Locus tag: BACEGG_01340
Name: crp
Funciton: transcriptional regulator, Crp/Fnr family
BACEGG_01340
crp
transcriptional regulator, Crp/Fnr family
Position: -74
Score: 6.3
Sequence: TTTTATGTTATTTAGCATAAAA
Locus tag: BACEGG_02676
Name: serB
Funciton: Phosphoserine phosphatase (EC 3.1.3.3)
BACEGG_02676
serB
Phosphoserine phosphatase (EC 3.1.3.3)
Position: -92
Score: 5.2
Sequence: GTATATGTTACACAACATGTAC
Locus tag: BACEGG_00165
Name: GH97
Funciton: Alpha-glucosidase, glycoside hydrolase family 97
BACEGG_00165
GH97
Alpha-glucosidase, glycoside hydrolase family 97
Position: -185
Score: 5.3
Sequence: ATTTCTGCTTTACAACATACTC
Locus tag: BACEGG_00870
Name: susC_Rgu-1
Funciton: TonB-dependent outer membrane transporter of rhamnogalacturonan oligomers
Locus tag: BACEGG_00869
Name: susD_Rgu-1
Funciton: Outer membrane polysaccharide binding protein for rhamnogalacturonan oligomers
Locus tag: BACEGG_00868
Name: BT4112
Funciton: Predicted pectin lyase
BACEGG_00870
susC_Rgu-1
TonB-dependent outer membrane transporter of rhamnogalacturonan oligomers
BACEGG_00869
susD_Rgu-1
Outer membrane polysaccharide binding protein for rhamnogalacturonan oligomers
BACEGG_00868
BT4112
Predicted pectin lyase
Position: -105
Score: 6.1
Sequence: TTTTATGTTACATAACATACAA
Locus tag: BACEGG_01536
Name: araM
Funciton: Aldose 1-epimerase (EC 5.1.3.3), L-arabinose mutarotase
Locus tag: BACEGG_01535
Name: araP
Funciton: Predicted sodium-dependent arabinose transporter
Locus tag: BACEGG_01534
Name: araR
Funciton: Predicted transcriptional regulator for arabinose utilization, NrtR family
Locus tag: BACEGG_01533
Name: araD
Funciton: L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
Locus tag: BACEGG_01532
Name: araA
Funciton: L-arabinose isomerase (EC 5.3.1.4)
Locus tag: BACEGG_01531
Name: araB
Funciton: Ribulokinase (EC 2.7.1.16)
BACEGG_01536
araM
Aldose 1-epimerase (EC 5.1.3.3), L-arabinose mutarotase
BACEGG_01535
araP
Predicted sodium-dependent arabinose transporter
BACEGG_01534
araR
Predicted transcriptional regulator for arabinose utilization, NrtR family
BACEGG_01533
araD
L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4)
BACEGG_01532
araA
L-arabinose isomerase (EC 5.3.1.4)
BACEGG_01531
araB
Ribulokinase (EC 2.7.1.16)
Position: -92
Score: 4.8
Sequence: AATAATGCTTTGTAACATATCA
Locus tag: BACEGG_02642
Name: xylR
Funciton: Predicted regulator of xylose utilization, NrtR family
Locus tag: BACEGG_02643
Name: xylB
Funciton: Xylulose kinase (EC 2.7.1.17)
Locus tag: BACEGG_02644
Name: xylA
Funciton: Xylose isomerase (EC 5.3.1.5)
Locus tag: BACEGG_02645
Name: xylE
Funciton: D-xylose proton-symporter XylE
BACEGG_02642
xylR
Predicted regulator of xylose utilization, NrtR family
BACEGG_02643
xylB
Xylulose kinase (EC 2.7.1.17)
BACEGG_02644
xylA
Xylose isomerase (EC 5.3.1.5)
BACEGG_02645
xylE
D-xylose proton-symporter XylE
Position: -193
Score: 5.8
Sequence: GACTATGTTATATAACATAAAA
Locus tag: BACEGG_01333
Name: nupG
Funciton: Nucleoside permease NupG
BACEGG_01333
nupG
Nucleoside permease NupG
Position: -188
Score: 5.3
Sequence: TAATATGTTACACAAAAGAAAA
Position: -61
Score: 5.8
Sequence: TTTTCTGTTATAGAACAGAATT
Locus tag: BACEGG_03101
Name: PF01694
Funciton: Peptidase S54, rhomboid domain
Locus tag: BACEGG_03102
Name: PF01694
Funciton: Peptidase S54, rhomboid domain
Locus tag: BACEGG_03103
Name: PF03372
Funciton: Endonuclease/exonuclease/phosphatase
Locus tag: BACEGG_03104
Name: PF01432
Funciton: Peptidase M3A/M3B, thimet/oligopeptidase F
Locus tag: BACEGG_03105
Name: secDF
Funciton: Preprotein translocase subunits SecD-SecF
BACEGG_03101
PF01694
Peptidase S54, rhomboid domain
BACEGG_03102
PF01694
Peptidase S54, rhomboid domain
BACEGG_03103
PF03372
Endonuclease/exonuclease/phosphatase
BACEGG_03104
PF01432
Peptidase M3A/M3B, thimet/oligopeptidase F
BACEGG_03105
secDF
Preprotein translocase subunits SecD-SecF
Position: -109
Score: 5.6
Sequence: TAACGTGTTATATAACATAAAA
Locus tag: BACEGG_02494
Name: PF09719
Funciton: Putative redox-active protein (C_GCAxxG_C_C)
BACEGG_02494
PF09719
Putative redox-active protein (C_GCAxxG_C_C)
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