Regulon of CodY in Streptococcus suis 05ZYH33
| Regulator type: | Transcription factor |
| TF locus tag: | SSU05_0350 |
| Regulator family: | CodY |
| Regulation mode: | repressor (activator) |
| Biological process: | Amino acid metabolism |
| Effector: | Guanosine triphosphate; Branched-chain amino acids |
| Regulog: | CodY - Streptococcaceae |
| Statistics of regulated genes: | |
| - Genes | 32 |
| - Operons | 14 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Streptococcaceae
- By TF family - CodY
- By effector - Guanosine triphosphate
- By effector - Branched-chain amino acids
- By pathway - Amino acid metabolism
| Locus Tag | Name | Function | |
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Position: -276
Score: 4.6 Sequence: AAGATTCTAAAAATT
Locus tag: SSU05_0121
Name: rpoB Funciton: DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)
Locus tag: SSU05_0122
Name: rpoC Funciton: DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6) |
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rpoB
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DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)
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rpoC
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DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)
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Position: -45
Score: 5.1 Sequence: AATTGTCAGACAATT
Locus tag: SSU05_0252
Name: gdhA Funciton: NADP-specific glutamate dehydrogenase (EC 1.4.1.4) |
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gdhA
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NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
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Position: -74
Score: 5.3 Sequence: AATATTCTGATAATT
Locus tag: SSU05_0350
Name: codY Funciton: Nutrient limitation global transcriptional regulator CodY, CodY family
Locus tag: SSU05_0351
Name: pncA Funciton: Nicotinamidase (EC 3.5.1.19) |
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codY
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Nutrient limitation global transcriptional regulator CodY, CodY family
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pncA
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Nicotinamidase (EC 3.5.1.19)
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Position: -54
Score: 5.2 Sequence: AATTGTCTGAATATT
Locus tag: SSU05_0665
Name: serC Funciton: Phosphoserine aminotransferase (EC 2.6.1.52)
Locus tag: SSU05_0666
Name: yesJ Funciton: Acetyltransferase (EC 2.3.1.-), GNAT family
Locus tag: SSU05_0667
Name: serA Funciton: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) |
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serC
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Phosphoserine aminotransferase (EC 2.6.1.52)
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yesJ
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Acetyltransferase (EC 2.3.1.-), GNAT family
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serA
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D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
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Position: -173
Score: 5.1 Sequence: ATTTTTTTGAAAATT
Locus tag: SSU05_0279
Name: adhB1 Funciton: Alcohol dehydrogenase (EC 1.1.1.1) |
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adhB1
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Alcohol dehydrogenase (EC 1.1.1.1)
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Position: -56
Score: 4.8 Sequence: AATTTTCTGTCAATT
Locus tag: SSU05_0281
Name: thrC Funciton: Threonine synthase (EC 4.2.3.1) |
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thrC
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Threonine synthase (EC 4.2.3.1)
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Position: -296
Score: 5.8 Sequence: AATTTTCAGAAAATT
Locus tag: SSU05_1888
Name: ilvB Funciton: Acetolactate synthase large subunit (EC 2.2.1.6)
Locus tag: SSU05_1887
Name: ilvN Funciton: Acetolactate synthase small subunit (EC 2.2.1.6)
Locus tag: SSU05_1886
Name: ilvC Funciton: Ketol-acid reductoisomerase (EC 1.1.1.86)
Locus tag: SSU05_1885
Name: ilvA Funciton: Threonine dehydratase (EC 4.3.1.19) |
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ilvB
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Acetolactate synthase large subunit (EC 2.2.1.6)
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ilvN
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Acetolactate synthase small subunit (EC 2.2.1.6)
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ilvC
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Ketol-acid reductoisomerase (EC 1.1.1.86)
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ilvA
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Threonine dehydratase (EC 4.3.1.19)
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Position: -52
Score: 5 Sequence: AATAGTCAGAATATT
Locus tag: SSU05_0801
Name: hom Funciton: Homoserine dehydrogenase (EC 1.1.1.3)
Locus tag: SSU05_0803
Name: thrB Funciton: Homoserine kinase (EC 2.7.1.39) |
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hom
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Homoserine dehydrogenase (EC 1.1.1.3)
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thrB
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Homoserine kinase (EC 2.7.1.39)
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Position: -146
Score: 5.1 Sequence: AATTTTCAGAATATA
Locus tag: SSU05_0811
Name: scpC Funciton: Serine endopeptidase ScpC (EC 3.4.21.-)
Locus tag: SSU05_0812
Name: scpC Funciton: Serine endopeptidase ScpC (EC 3.4.21.-) |
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scpC
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Serine endopeptidase ScpC (EC 3.4.21.-)
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scpC
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Serine endopeptidase ScpC (EC 3.4.21.-)
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Position: -123
Score: 4.6 Sequence: GTTTTTCTGAAATTT
Locus tag: SSU05_1811
Name: thrA Funciton: Aspartokinase (EC 2.7.2.4) |
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thrA
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Aspartokinase (EC 2.7.2.4)
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Position: -117
Score: 4.9 Sequence: AATTTTCTGTAATTT
Position: -73
Score: 5.3 Sequence: TATTTTCAGAAAATT
Locus tag: SSU05_1547
Name: livH Funciton: Branched-chain amino acids ABC transporter, permease protein 1 (TC 3.A.1.4.1)
Locus tag: SSU05_1546
Name: livM Funciton: Branched-chain amino acids ABC transporter, permease protein 2 (TC 3.A.1.4.1)
Locus tag: SSU05_1545
Name: livG Funciton: Branched-chain amino acids ABC transporter, ATP-binding protein 1 (TC 3.A.1.4.1)
Locus tag: SSU05_1544
Name: livG Funciton: Branched-chain amino acids ABC transporter, ATP-binding protein 1 (TC 3.A.1.4.1)
Locus tag: SSU05_1543
Name: livF Funciton: Branched-chain amino acids ABC transporter, ATP-binding protein 2 (TC 3.A.1.4.1) |
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livH
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Branched-chain amino acids ABC transporter, permease protein 1 (TC 3.A.1.4.1)
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livM
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Branched-chain amino acids ABC transporter, permease protein 2 (TC 3.A.1.4.1)
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livG
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Branched-chain amino acids ABC transporter, ATP-binding protein 1 (TC 3.A.1.4.1)
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livG
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Branched-chain amino acids ABC transporter, ATP-binding protein 1 (TC 3.A.1.4.1)
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livF
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Branched-chain amino acids ABC transporter, ATP-binding protein 2 (TC 3.A.1.4.1)
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Position: -64
Score: 5.6 Sequence: AATTTTCAGATAATT
Locus tag: SSU05_1548
Name: livK Funciton: Branched-chain amino acids ABC transporter, substrate-binding protein (TC 3.A.1.4.1) |
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livK
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Branched-chain amino acids ABC transporter, substrate-binding protein (TC 3.A.1.4.1)
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Position: -124
Score: 5.3 Sequence: AATTATCAGAATATT
Locus tag: SSU05_0467
Name: asnA Funciton: Aspartate--ammonia ligase (EC 6.3.1.1) |
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asnA
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Aspartate--ammonia ligase (EC 6.3.1.1)
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Position: -63
Score: 4.6 Sequence: AAAAATCAGAAAATA
Locus tag: SSU05_0596
Name: aroA Funciton: 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
Locus tag: SSU05_0597
Name: aroA Funciton: 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
Locus tag: SSU05_0598
Name: aroA Funciton: 5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
Locus tag: SSU05_0599
Name: aroK Funciton: Shikimate kinase I (EC 2.7.1.71)
Locus tag: SSU05_0600
Name: pheA Funciton: Prephenate dehydratase (EC 4.2.1.51)
Locus tag: SSU05_0601
Name: pheA Funciton: Prephenate dehydratase (EC 4.2.1.51) |
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aroA
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5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
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aroA
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5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
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aroA
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5-Enolpyruvylshikimate-3-phosphate synthase (EC 2.5.1.19)
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aroK
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Shikimate kinase I (EC 2.7.1.71)
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pheA
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Prephenate dehydratase (EC 4.2.1.51)
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pheA
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Prephenate dehydratase (EC 4.2.1.51)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |