Regulon of CodY in Streptococcus sanguinis SK36

Properties
Regulator type:	Transcription factor
TF locus tag:	SSA_0566
Regulator family:	CodY
Regulation mode:	repressor (activator)
Biological process:	Amino acid metabolism
Effector:	Guanosine triphosphate; Branched-chain amino acids
Regulog:	CodY - Streptococcaceae
Statistics of regulated genes:
- Genes	43
- Operons	21
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 273 sites [see more]

Member of regulog collections

By taxonomy - Streptococcaceae
By TF family - CodY
By effector - Guanosine triphosphate
By effector - Branched-chain amino acids
By pathway - Amino acid metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -53 Score: 5.8 Sequence: AATTTTCAGAAAATT Locus tag: SSA_0774 Name: gapN Funciton: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (NADP) (EC 1.2.1.9)
	SSA_0774	gapN	Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (NADP) (EC 1.2.1.9)
Position: -71 Score: 5.6 Sequence: AATTTTCAGATAATT Locus tag: SSA_0566 Name: codY Funciton: Nutrient limitation global transcriptional regulator CodY, CodY family Locus tag: SSA_0567 Name: pncA Funciton: Nicotinamidase (EC 3.5.1.19)
	SSA_0566	codY	Nutrient limitation global transcriptional regulator CodY, CodY family
	SSA_0567	pncA	Nicotinamidase (EC 3.5.1.19)
Position: -182 Score: 5.5 Sequence: AATTTTTAGAAAATT Locus tag: SSA_0371 Name: gdhA Funciton: NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
	SSA_0371	gdhA	NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
Position: -98 Score: 5.8 Sequence: AATTTTCTGAAAATT Locus tag: SSA_1225 Name: ilvE Funciton: Branched-chain amino acid aminotransferase (EC 2.6.1.42)
	SSA_1225	ilvE	Branched-chain amino acid aminotransferase (EC 2.6.1.42)
Position: -64 Score: 5 Sequence: AATTGTCTGAAAATA Locus tag: SSA_0321 Name: ubiE Funciton: SAM-dependent methyltransferase
	SSA_0321	ubiE	SAM-dependent methyltransferase
Position: -57 Score: 5.2 Sequence: AATTTTCTGATAAAT Locus tag: SSA_0095 Name: thrC Funciton: Threonine synthase (EC 4.2.3.1)
	SSA_0095	thrC	Threonine synthase (EC 4.2.3.1)
Position: -37 Score: 5.5 Sequence: AATTTTTAGAAAATT Locus tag: SSA_1970 Name: ilvB Funciton: Acetolactate synthase large subunit (EC 2.2.1.6) Locus tag: SSA_1969 Name: ilvN Funciton: Acetolactate synthase small subunit (EC 2.2.1.6) Locus tag: SSA_1968 Name: ilvC Funciton: Ketol-acid reductoisomerase (EC 1.1.1.86) Locus tag: SSA_1967 Name: ilvA Funciton: Threonine dehydratase (EC 4.3.1.19)
	SSA_1970	ilvB	Acetolactate synthase large subunit (EC 2.2.1.6)
	SSA_1969	ilvN	Acetolactate synthase small subunit (EC 2.2.1.6)
	SSA_1968	ilvC	Ketol-acid reductoisomerase (EC 1.1.1.86)
	SSA_1967	ilvA	Threonine dehydratase (EC 4.3.1.19)
Position: -78 Score: 5.6 Sequence: AATTATCAGAAAATT Locus tag: SSA_2165 Name: oppA2 Funciton: Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1)
	SSA_2165	oppA2	Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1)
Position: -87 Score: 5.6 Sequence: AATATTCTGAAAATT Locus tag: SSA_1948 Name: oppA2 Funciton: Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1) Locus tag: SSA_1947 Name: oppB2 Funciton: Oligopeptide ABC transporter, permease protein 1 (TC 3.A.1.5.1) Locus tag: SSA_1946 Name: oppC2 Funciton: Oligopeptide ABC transporter, permease protein 2 (TC 3.A.1.5.1) Locus tag: SSA_1945 Name: oppD2 Funciton: Oligopeptide ABC transporter, ATP-binding protein 1 (TC 3.A.1.5.1) Locus tag: SSA_1944 Name: oppF2 Funciton: Oligopeptide ABC transporter, ATP-binding protein 2 (TC 3.A.1.5.1)
	SSA_1948	oppA2	Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1)
	SSA_1947	oppB2	Oligopeptide ABC transporter, permease protein 1 (TC 3.A.1.5.1)
	SSA_1946	oppC2	Oligopeptide ABC transporter, permease protein 2 (TC 3.A.1.5.1)
	SSA_1945	oppD2	Oligopeptide ABC transporter, ATP-binding protein 1 (TC 3.A.1.5.1)
	SSA_1944	oppF2	Oligopeptide ABC transporter, ATP-binding protein 2 (TC 3.A.1.5.1)
Position: -30 Score: 5.5 Sequence: AATTTTTTGAAAATT Locus tag: SSA_1194 Name: asd Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) Locus tag: SSA_1193 Name: dapA Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
	SSA_1194	asd	Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
	SSA_1193	dapA	Dihydrodipicolinate synthase (EC 4.2.1.52)
Position: -78 Score: 5.3 Sequence: AATCTTCTGAAAATT Locus tag: SSA_2286 Name: ilvD Funciton: Dihydroxy-acid dehydratase (EC 4.2.1.9)
	SSA_2286	ilvD	Dihydroxy-acid dehydratase (EC 4.2.1.9)
Position: 22 Score: 4.5 Sequence: AATTTCCAGAAAATG Locus tag: SSA_2051 Name: pepF Funciton: Oligoendopeptidase F
	SSA_2051	pepF	Oligoendopeptidase F
Position: -290 Score: 4.7 Sequence: AATTTTCATAAAATA Locus tag: SSA_0363 Name: dagA Funciton: Sodium/glycine symporter
	SSA_0363	dagA	Sodium/glycine symporter
Position: -87 Score: 4.5 Sequence: TATATTGAGAAAATT Locus tag: SSA_0983 Name: yfjA Funciton: Conserved hypothetical protein
	SSA_0983	yfjA	Conserved hypothetical protein
Position: -92 Score: 5.1 Sequence: AATTGTCAGACAATT Locus tag: SSA_1129 Name: efeO Funciton: Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain Locus tag: SSA_1130 Name: efeB Funciton: Ferrous iron transport peroxidase EfeB Locus tag: SSA_1131 Name: efeU Funciton: Ferrous iron transport permease EfeU Locus tag: SSA_1132 Name: tatC Funciton: Twin-arginine translocation protein TatC Locus tag: SSA_1133 Name: tatA Funciton: Twin-arginine translocation protein TatA
	SSA_1129	efeO	Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain
	SSA_1130	efeB	Ferrous iron transport peroxidase EfeB
	SSA_1131	efeU	Ferrous iron transport permease EfeU
	SSA_1132	tatC	Twin-arginine translocation protein TatC
	SSA_1133	tatA	Twin-arginine translocation protein TatA
Position: -56 Score: 5.4 Sequence: AATTGTCAGAAAATT Locus tag: SSA_1882 Name: scpC Funciton: Serine endopeptidase ScpC (EC 3.4.21.-)
	SSA_1882	scpC	Serine endopeptidase ScpC (EC 3.4.21.-)
Position: -112 Score: 4.6 Sequence: ATTTTTCTAAATTTT Locus tag: SSA_1724 Name: acuB Funciton: Acetoin utilization protein AcuB
	SSA_1724	acuB	Acetoin utilization protein AcuB
Position: -42 Score: 5.3 Sequence: AAAATTCAGAAAATT Locus tag: SSA_0593 Name: ymdE Funciton: Conserved hypothetical protein
	SSA_0593	ymdE	Conserved hypothetical protein
Position: -65 Score: 5.2 Sequence: AATTGTCAGATAATT Locus tag: SSA_1729 Name: livK Funciton: Branched-chain amino acids ABC transporter, substrate-binding protein (TC 3.A.1.4.1) Locus tag: SSA_1728 Name: livH Funciton: Branched-chain amino acids ABC transporter, permease protein 1 (TC 3.A.1.4.1) Locus tag: SSA_1727 Name: livM Funciton: Branched-chain amino acids ABC transporter, permease protein 2 (TC 3.A.1.4.1) Locus tag: SSA_1726 Name: livG Funciton: Branched-chain amino acids ABC transporter, ATP-binding protein 1 (TC 3.A.1.4.1) Locus tag: SSA_1725 Name: livF Funciton: Branched-chain amino acids ABC transporter, ATP-binding protein 2 (TC 3.A.1.4.1)
	SSA_1729	livK	Branched-chain amino acids ABC transporter, substrate-binding protein (TC 3.A.1.4.1)
	SSA_1728	livH	Branched-chain amino acids ABC transporter, permease protein 1 (TC 3.A.1.4.1)
	SSA_1727	livM	Branched-chain amino acids ABC transporter, permease protein 2 (TC 3.A.1.4.1)
	SSA_1726	livG	Branched-chain amino acids ABC transporter, ATP-binding protein 1 (TC 3.A.1.4.1)
	SSA_1725	livF	Branched-chain amino acids ABC transporter, ATP-binding protein 2 (TC 3.A.1.4.1)
Position: -47 Score: 5.3 Sequence: AATTTTCAGAATTTT Locus tag: SSA_1943 Name: thrA Funciton: Aspartokinase (EC 2.7.2.4)
	SSA_1943	thrA	Aspartokinase (EC 2.7.2.4)
Position: -269 Score: 5.3 Sequence: AATTTTCAGAAAATA Locus tag: SSA_0975 Name: leuA Funciton: 2-isopropylmalate synthase (EC 2.3.3.13) Locus tag: SSA_0977 Name: leuB Funciton: 3-isopropylmalate dehydrogenase (EC 1.1.1.85) Locus tag: SSA_0978 Name: ygaE Funciton: Predicted transmembrane protein Locus tag: SSA_0980 Name: leuC Funciton: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33) Locus tag: SSA_0981 Name: leuD Funciton: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33) Locus tag: SSA_0983 Name: yfjA Funciton: Conserved hypothetical protein
	SSA_0975	leuA	2-isopropylmalate synthase (EC 2.3.3.13)
	SSA_0977	leuB	3-isopropylmalate dehydrogenase (EC 1.1.1.85)
	SSA_0978	ygaE	Predicted transmembrane protein
	SSA_0980	leuC	3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
	SSA_0981	leuD	3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
	SSA_0983	yfjA	Conserved hypothetical protein

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of CodY in Streptococcus sanguinis SK36

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --