Regulon of CodY in Streptococcus sanguinis SK36
| Regulator type: | Transcription factor |
| TF locus tag: | SSA_0566 |
| Regulator family: | CodY |
| Regulation mode: | repressor (activator) |
| Biological process: | Amino acid metabolism |
| Effector: | Guanosine triphosphate; Branched-chain amino acids |
| Regulog: | CodY - Streptococcaceae |
| Statistics of regulated genes: | |
| - Genes | 43 |
| - Operons | 21 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Streptococcaceae
- By TF family - CodY
- By effector - Guanosine triphosphate
- By effector - Branched-chain amino acids
- By pathway - Amino acid metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -53
Score: 5.8 Sequence: AATTTTCAGAAAATT
Locus tag: SSA_0774
Name: gapN Funciton: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (NADP) (EC 1.2.1.9) |
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gapN
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Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (NADP) (EC 1.2.1.9)
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Position: -71
Score: 5.6 Sequence: AATTTTCAGATAATT
Locus tag: SSA_0566
Name: codY Funciton: Nutrient limitation global transcriptional regulator CodY, CodY family
Locus tag: SSA_0567
Name: pncA Funciton: Nicotinamidase (EC 3.5.1.19) |
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codY
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Nutrient limitation global transcriptional regulator CodY, CodY family
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pncA
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Nicotinamidase (EC 3.5.1.19)
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Position: -182
Score: 5.5 Sequence: AATTTTTAGAAAATT
Locus tag: SSA_0371
Name: gdhA Funciton: NADP-specific glutamate dehydrogenase (EC 1.4.1.4) |
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gdhA
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NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
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Position: -98
Score: 5.8 Sequence: AATTTTCTGAAAATT
Locus tag: SSA_1225
Name: ilvE Funciton: Branched-chain amino acid aminotransferase (EC 2.6.1.42) |
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ilvE
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Branched-chain amino acid aminotransferase (EC 2.6.1.42)
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Position: -64
Score: 5 Sequence: AATTGTCTGAAAATA
Locus tag: SSA_0321
Name: ubiE Funciton: SAM-dependent methyltransferase |
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ubiE
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SAM-dependent methyltransferase
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Position: -57
Score: 5.2 Sequence: AATTTTCTGATAAAT
Locus tag: SSA_0095
Name: thrC Funciton: Threonine synthase (EC 4.2.3.1) |
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thrC
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Threonine synthase (EC 4.2.3.1)
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Position: -37
Score: 5.5 Sequence: AATTTTTAGAAAATT
Locus tag: SSA_1970
Name: ilvB Funciton: Acetolactate synthase large subunit (EC 2.2.1.6)
Locus tag: SSA_1969
Name: ilvN Funciton: Acetolactate synthase small subunit (EC 2.2.1.6)
Locus tag: SSA_1968
Name: ilvC Funciton: Ketol-acid reductoisomerase (EC 1.1.1.86)
Locus tag: SSA_1967
Name: ilvA Funciton: Threonine dehydratase (EC 4.3.1.19) |
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ilvB
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Acetolactate synthase large subunit (EC 2.2.1.6)
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ilvN
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Acetolactate synthase small subunit (EC 2.2.1.6)
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ilvC
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Ketol-acid reductoisomerase (EC 1.1.1.86)
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ilvA
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Threonine dehydratase (EC 4.3.1.19)
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Position: -78
Score: 5.6 Sequence: AATTATCAGAAAATT
Locus tag: SSA_2165
Name: oppA2 Funciton: Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1) |
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oppA2
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Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1)
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Position: -87
Score: 5.6 Sequence: AATATTCTGAAAATT
Locus tag: SSA_1948
Name: oppA2 Funciton: Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1)
Locus tag: SSA_1947
Name: oppB2 Funciton: Oligopeptide ABC transporter, permease protein 1 (TC 3.A.1.5.1)
Locus tag: SSA_1946
Name: oppC2 Funciton: Oligopeptide ABC transporter, permease protein 2 (TC 3.A.1.5.1)
Locus tag: SSA_1945
Name: oppD2 Funciton: Oligopeptide ABC transporter, ATP-binding protein 1 (TC 3.A.1.5.1)
Locus tag: SSA_1944
Name: oppF2 Funciton: Oligopeptide ABC transporter, ATP-binding protein 2 (TC 3.A.1.5.1) |
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oppA2
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Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1)
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oppB2
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Oligopeptide ABC transporter, permease protein 1 (TC 3.A.1.5.1)
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oppC2
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Oligopeptide ABC transporter, permease protein 2 (TC 3.A.1.5.1)
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oppD2
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Oligopeptide ABC transporter, ATP-binding protein 1 (TC 3.A.1.5.1)
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oppF2
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Oligopeptide ABC transporter, ATP-binding protein 2 (TC 3.A.1.5.1)
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Position: -30
Score: 5.5 Sequence: AATTTTTTGAAAATT
Locus tag: SSA_1194
Name: asd Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: SSA_1193
Name: dapA Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52) |
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asd
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Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
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dapA
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Dihydrodipicolinate synthase (EC 4.2.1.52)
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Position: -78
Score: 5.3 Sequence: AATCTTCTGAAAATT
Locus tag: SSA_2286
Name: ilvD Funciton: Dihydroxy-acid dehydratase (EC 4.2.1.9) |
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ilvD
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Dihydroxy-acid dehydratase (EC 4.2.1.9)
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Position: 22
Score: 4.5 Sequence: AATTTCCAGAAAATG
Locus tag: SSA_2051
Name: pepF Funciton: Oligoendopeptidase F |
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pepF
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Oligoendopeptidase F
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Position: -290
Score: 4.7 Sequence: AATTTTCATAAAATA
Locus tag: SSA_0363
Name: dagA Funciton: Sodium/glycine symporter |
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dagA
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Sodium/glycine symporter
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Position: -87
Score: 4.5 Sequence: TATATTGAGAAAATT
Locus tag: SSA_0983
Name: yfjA Funciton: Conserved hypothetical protein |
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yfjA
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Conserved hypothetical protein
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Position: -92
Score: 5.1 Sequence: AATTGTCAGACAATT
Locus tag: SSA_1129
Name: efeO Funciton: Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain
Locus tag: SSA_1130
Name: efeB Funciton: Ferrous iron transport peroxidase EfeB
Locus tag: SSA_1131
Name: efeU Funciton: Ferrous iron transport permease EfeU
Locus tag: SSA_1132
Name: tatC Funciton: Twin-arginine translocation protein TatC
Locus tag: SSA_1133
Name: tatA Funciton: Twin-arginine translocation protein TatA |
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efeO
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Ferrous iron transport periplasmic protein EfeO, contains peptidase-M75 domain and (frequently) cupredoxin-like domain
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efeB
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Ferrous iron transport peroxidase EfeB
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efeU
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Ferrous iron transport permease EfeU
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tatC
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Twin-arginine translocation protein TatC
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tatA
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Twin-arginine translocation protein TatA
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Position: -56
Score: 5.4 Sequence: AATTGTCAGAAAATT
Locus tag: SSA_1882
Name: scpC Funciton: Serine endopeptidase ScpC (EC 3.4.21.-) |
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scpC
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Serine endopeptidase ScpC (EC 3.4.21.-)
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Position: -112
Score: 4.6 Sequence: ATTTTTCTAAATTTT
Locus tag: SSA_1724
Name: acuB Funciton: Acetoin utilization protein AcuB |
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acuB
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Acetoin utilization protein AcuB
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Position: -42
Score: 5.3 Sequence: AAAATTCAGAAAATT
Locus tag: SSA_0593
Name: ymdE Funciton: Conserved hypothetical protein |
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ymdE
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Conserved hypothetical protein
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Position: -65
Score: 5.2 Sequence: AATTGTCAGATAATT
Locus tag: SSA_1729
Name: livK Funciton: Branched-chain amino acids ABC transporter, substrate-binding protein (TC 3.A.1.4.1)
Locus tag: SSA_1728
Name: livH Funciton: Branched-chain amino acids ABC transporter, permease protein 1 (TC 3.A.1.4.1)
Locus tag: SSA_1727
Name: livM Funciton: Branched-chain amino acids ABC transporter, permease protein 2 (TC 3.A.1.4.1)
Locus tag: SSA_1726
Name: livG Funciton: Branched-chain amino acids ABC transporter, ATP-binding protein 1 (TC 3.A.1.4.1)
Locus tag: SSA_1725
Name: livF Funciton: Branched-chain amino acids ABC transporter, ATP-binding protein 2 (TC 3.A.1.4.1) |
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livK
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Branched-chain amino acids ABC transporter, substrate-binding protein (TC 3.A.1.4.1)
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livH
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Branched-chain amino acids ABC transporter, permease protein 1 (TC 3.A.1.4.1)
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livM
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Branched-chain amino acids ABC transporter, permease protein 2 (TC 3.A.1.4.1)
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livG
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Branched-chain amino acids ABC transporter, ATP-binding protein 1 (TC 3.A.1.4.1)
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livF
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Branched-chain amino acids ABC transporter, ATP-binding protein 2 (TC 3.A.1.4.1)
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Position: -47
Score: 5.3 Sequence: AATTTTCAGAATTTT
Locus tag: SSA_1943
Name: thrA Funciton: Aspartokinase (EC 2.7.2.4) |
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thrA
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Aspartokinase (EC 2.7.2.4)
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Position: -269
Score: 5.3 Sequence: AATTTTCAGAAAATA
Locus tag: SSA_0975
Name: leuA Funciton: 2-isopropylmalate synthase (EC 2.3.3.13)
Locus tag: SSA_0977
Name: leuB Funciton: 3-isopropylmalate dehydrogenase (EC 1.1.1.85)
Locus tag: SSA_0978
Name: ygaE Funciton: Predicted transmembrane protein
Locus tag: SSA_0980
Name: leuC Funciton: 3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
Locus tag: SSA_0981
Name: leuD Funciton: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
Locus tag: SSA_0983
Name: yfjA Funciton: Conserved hypothetical protein |
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leuA
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2-isopropylmalate synthase (EC 2.3.3.13)
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leuB
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3-isopropylmalate dehydrogenase (EC 1.1.1.85)
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ygaE
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Predicted transmembrane protein
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leuC
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3-isopropylmalate dehydratase large subunit (EC 4.2.1.33)
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leuD
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3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
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yfjA
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Conserved hypothetical protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |