Regulon of CodY in Streptococcus dysgalactiae subsp. equisimilis GGS_124
| Regulator type: | Transcription factor |
| TF locus tag: | SDEG_1848 |
| Regulator family: | CodY |
| Regulation mode: | repressor (activator) |
| Biological process: | Amino acid metabolism |
| Effector: | Guanosine triphosphate; Branched-chain amino acids |
| Regulog: | CodY - Streptococcaceae |
| Statistics of regulated genes: | |
| - Genes | 27 |
| - Operons | 12 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Streptococcaceae
- By TF family - CodY
- By effector - Guanosine triphosphate
- By effector - Branched-chain amino acids
- By pathway - Amino acid metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -115
Score: 5.3 Sequence: AATATTCAGATAATT
Locus tag: SDEG_0356
Name: oppA2 Funciton: Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1)
Locus tag: SDEG_0357
Name: oppB2 Funciton: Oligopeptide ABC transporter, permease protein 1 (TC 3.A.1.5.1)
Locus tag: SDEG_0358
Name: oppC2 Funciton: Oligopeptide ABC transporter, permease protein 2 (TC 3.A.1.5.1)
Locus tag: SDEG_0359
Name: oppD2 Funciton: Oligopeptide ABC transporter, ATP-binding protein 1 (TC 3.A.1.5.1)
Locus tag: SDEG_0360
Name: oppF2 Funciton: Oligopeptide ABC transporter, ATP-binding protein 2 (TC 3.A.1.5.1) |
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oppA2
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Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1)
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oppB2
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Oligopeptide ABC transporter, permease protein 1 (TC 3.A.1.5.1)
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oppC2
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Oligopeptide ABC transporter, permease protein 2 (TC 3.A.1.5.1)
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oppD2
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Oligopeptide ABC transporter, ATP-binding protein 1 (TC 3.A.1.5.1)
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oppF2
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Oligopeptide ABC transporter, ATP-binding protein 2 (TC 3.A.1.5.1)
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Position: -87
Score: 4.9 Sequence: AATTTTCTGATACTT
Locus tag: SDEG_1419
Name: gapN Funciton: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (NADP) (EC 1.2.1.9) |
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gapN
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Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (NADP) (EC 1.2.1.9)
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Position: -90
Score: 5.2 Sequence: AATTTTCAGATAAAT
Locus tag: SDEG_1930
Name: oppA1 Funciton: Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1)
Locus tag: SDEG_1929
Name: oppB1 Funciton: Oligopeptide ABC transporter, permease protein 1 (TC 3.A.1.5.1)
Locus tag: SDEG_1928
Name: oppC1 Funciton: Oligopeptide ABC transporter, permease protein 2 (TC 3.A.1.5.1)
Locus tag: SDEG_1927
Name: oppD1 Funciton: Oligopeptide ABC transporter, ATP-binding protein 1 (TC 3.A.1.5.1)
Locus tag: SDEG_1926
Name: oppF1 Funciton: Oligopeptide ABC transporter, ATP-binding protein 2 (TC 3.A.1.5.1) |
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oppA1
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Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1)
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oppB1
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Oligopeptide ABC transporter, permease protein 1 (TC 3.A.1.5.1)
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oppC1
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Oligopeptide ABC transporter, permease protein 2 (TC 3.A.1.5.1)
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oppD1
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Oligopeptide ABC transporter, ATP-binding protein 1 (TC 3.A.1.5.1)
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oppF1
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Oligopeptide ABC transporter, ATP-binding protein 2 (TC 3.A.1.5.1)
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Position: -61
Score: 5.3 Sequence: AAAATTCAGAAAATT
Locus tag: SDEG_0823
Name: gdhA Funciton: NADP-specific glutamate dehydrogenase (EC 1.4.1.4) |
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gdhA
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NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
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Position: -80
Score: 5.6 Sequence: AATTTTCTGATAATT
Locus tag: SDEG_1848
Name: codY Funciton: Nutrient limitation global transcriptional regulator CodY, CodY family
Locus tag: SDEG_1847
Name: pncA Funciton: Nicotinamidase (EC 3.5.1.19) |
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codY
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Nutrient limitation global transcriptional regulator CodY, CodY family
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pncA
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Nicotinamidase (EC 3.5.1.19)
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Position: -113
Score: 5.2 Sequence: AATTTTCAGAAAACT
Locus tag: SDEG_0062
Name: adhB1 Funciton: Alcohol dehydrogenase (EC 1.1.1.1)
Locus tag: SDEG_0063
Name: thrC Funciton: Threonine synthase (EC 4.2.3.1) |
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adhB1
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Alcohol dehydrogenase (EC 1.1.1.1)
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thrC
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Threonine synthase (EC 4.2.3.1)
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Position: -98
Score: 4.9 Sequence: ATTTTTCAAAATATT
Position: -65
Score: 5.6 Sequence: AATTTTCTGATAATT
Locus tag: SDEG_0443
Name: livK Funciton: Branched-chain amino acids ABC transporter, substrate-binding protein (TC 3.A.1.4.1)
Locus tag: SDEG_0444
Name: livH Funciton: Branched-chain amino acids ABC transporter, permease protein 1 (TC 3.A.1.4.1)
Locus tag: SDEG_0445
Name: livM Funciton: Branched-chain amino acids ABC transporter, permease protein 2 (TC 3.A.1.4.1)
Locus tag: SDEG_0446
Name: livG Funciton: Branched-chain amino acids ABC transporter, ATP-binding protein 1 (TC 3.A.1.4.1)
Locus tag: SDEG_0447
Name: livF Funciton: Branched-chain amino acids ABC transporter, ATP-binding protein 2 (TC 3.A.1.4.1) |
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livK
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Branched-chain amino acids ABC transporter, substrate-binding protein (TC 3.A.1.4.1)
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livH
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Branched-chain amino acids ABC transporter, permease protein 1 (TC 3.A.1.4.1)
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livM
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Branched-chain amino acids ABC transporter, permease protein 2 (TC 3.A.1.4.1)
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livG
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Branched-chain amino acids ABC transporter, ATP-binding protein 1 (TC 3.A.1.4.1)
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livF
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Branched-chain amino acids ABC transporter, ATP-binding protein 2 (TC 3.A.1.4.1)
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Position: -60
Score: 5.5 Sequence: AATTTTTAGAAAATT
Locus tag: SDEG_1025
Name: asd Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11) |
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asd
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Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
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Position: -167
Score: 4.5 Sequence: CATTTTCAGGAAATT
Locus tag: SDEG_0621
Name: ppc Funciton: Phosphoenolpyruvate carboxylase (EC 4.1.1.31) |
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ppc
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Phosphoenolpyruvate carboxylase (EC 4.1.1.31)
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Position: -91
Score: 4.6 Sequence: AAGATTCTAAAAATT
Locus tag: SDEG_0131
Name: rpoB Funciton: DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)
Locus tag: SDEG_0132
Name: rpoC Funciton: DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6) |
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rpoB
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DNA-directed RNA polymerase beta subunit (EC 2.7.7.6)
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rpoC
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DNA-directed RNA polymerase beta' subunit (EC 2.7.7.6)
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Position: -41
Score: 5 Sequence: AATTTTCTGAAAAAA
Locus tag: SDEG_1715
Name: aapA Funciton: Amino acid permease |
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aapA
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Amino acid permease
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Position: -93
Score: 4.8 Sequence: AATTTTCTGAAAAAG
Position: -29
Score: 5.1 Sequence: AATTTTTAAAAAATT
Locus tag: SDEG_1454
Name: kup Funciton: Kup system potassium uptake protein |
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kup
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Kup system potassium uptake protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |