Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of CodY in Lactococcus lactis subsp. cremoris SK11

Properties
Regulator type: Transcription factor
TF locus tag: LACR_0168
Regulator family: CodY
Regulation mode: repressor (activator)
Biological process: Amino acid metabolism
Effector: Guanosine triphosphate; Branched-chain amino acids
Regulog: CodY - Streptococcaceae
Statistics of regulated genes:
- Genes 24
- Operons 12
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 273 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -97
Score: 4.8
Sequence: AATTGTTTGAAATTT
Locus tag: LACR_1409
Name: ilvE
Funciton: Branched-chain amino acid aminotransferase (EC 2.6.1.42)
LACR_1409
ilvE
Branched-chain amino acid aminotransferase (EC 2.6.1.42)
Position: -61
Score: 5.1
Sequence: AATATTCAGAAAATA
Locus tag: LACR_1699
Name: nrgA
Funciton: Ammonium transporter
Locus tag: LACR_1698
Name: nrgB
Funciton: Nitrogen regulatory protein P-II
LACR_1699
nrgA
Ammonium transporter
LACR_1698
nrgB
Nitrogen regulatory protein P-II
Position: -86
Score: 4.9
Sequence: AATATTCTGACAAAT
Locus tag: LACR_1312
Name: ilvD
Funciton: Dihydroxy-acid dehydratase (EC 4.2.1.9)
Locus tag: LACR_1311
Name: ilvB
Funciton: Acetolactate synthase large subunit (EC 2.2.1.6)
Locus tag: LACR_1310
Name: ilvN
Funciton: Acetolactate synthase small subunit (EC 2.2.1.6)
Locus tag: LACR_1309
Name: ilvC
Funciton: Ketol-acid reductoisomerase (EC 1.1.1.86)
LACR_1312
ilvD
Dihydroxy-acid dehydratase (EC 4.2.1.9)
LACR_1311
ilvB
Acetolactate synthase large subunit (EC 2.2.1.6)
LACR_1310
ilvN
Acetolactate synthase small subunit (EC 2.2.1.6)
LACR_1309
ilvC
Ketol-acid reductoisomerase (EC 1.1.1.86)
Position: -123
Score: 5.1
Sequence: AATTGTCAGAAAAAT
Position: -55
Score: 5.2
Sequence: AATTTTCAGAATAAT
Locus tag: LACR_0389
Name: oppA1
Funciton: Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1)
LACR_0389
oppA1
Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1)
Position: -80
Score: 4.9
Sequence: AATTATCAGAATATA
Locus tag: LACR_1407
Name: gltB
Funciton: Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
Locus tag: LACR_1406
Name: gltD
Funciton: Glutamate synthase [NADPH] small chain (EC 1.4.1.13)
LACR_1407
gltB
Glutamate synthase [NADPH] large chain (EC 1.4.1.13)
LACR_1406
gltD
Glutamate synthase [NADPH] small chain (EC 1.4.1.13)
Position: -129
Score: 4.7
Sequence: AATTTTCAGAAAACA
Position: -61
Score: 5
Sequence: AATTTTCTGACAATA
Locus tag: LACR_0390
Name: oppA1
Funciton: Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1)
Locus tag: LACR_0391
Name: oppB1
Funciton: Oligopeptide ABC transporter, permease protein 1 (TC 3.A.1.5.1)
Locus tag: LACR_0392
Name: oppC1
Funciton: Oligopeptide ABC transporter, permease protein 2 (TC 3.A.1.5.1)
Locus tag: LACR_0393
Name: oppD1
Funciton: Oligopeptide ABC transporter, ATP-binding protein 1 (TC 3.A.1.5.1)
Locus tag: LACR_0394
Name: oppF1
Funciton: Oligopeptide ABC transporter, ATP-binding protein 2 (TC 3.A.1.5.1)
LACR_0390
oppA1
Oligopeptide ABC transporter, substrate-binding protein (TC 3.A.1.5.1)
LACR_0391
oppB1
Oligopeptide ABC transporter, permease protein 1 (TC 3.A.1.5.1)
LACR_0392
oppC1
Oligopeptide ABC transporter, permease protein 2 (TC 3.A.1.5.1)
LACR_0393
oppD1
Oligopeptide ABC transporter, ATP-binding protein 1 (TC 3.A.1.5.1)
LACR_0394
oppF1
Oligopeptide ABC transporter, ATP-binding protein 2 (TC 3.A.1.5.1)
Position: -101
Score: 5.4
Sequence: AATTTTCTGACAATT
Locus tag: LACR_0168
Name: codY
Funciton: Nutrient limitation global transcriptional regulator CodY, CodY family
LACR_0168
codY
Nutrient limitation global transcriptional regulator CodY, CodY family
Position: -309
Score: 4.7
Sequence: ATAATTCAGATAATT
Locus tag: LACR_1336
Name: hisC
Funciton: Histidinol-phosphate aminotransferase (EC 2.6.1.9)
Locus tag: LACR_1335
Name: hisZ
Funciton: ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17)
LACR_1336
hisC
Histidinol-phosphate aminotransferase (EC 2.6.1.9)
LACR_1335
hisZ
ATP phosphoribosyltransferase regulatory subunit (EC 2.4.2.17)
Position: -125
Score: 4.8
Sequence: ATTTTTTTGATAATT
Locus tag: LACR_2073
Name: pepC
Funciton: Aminopeptidase C (EC 3.4.22.40)
LACR_2073
pepC
Aminopeptidase C (EC 3.4.22.40)
Position: -82
Score: 4.4
Sequence: ATTTTGTTGAAAATT
Locus tag: LACR_0616
Name: yfjA
Funciton: Conserved hypothetical protein
LACR_0616
yfjA
Conserved hypothetical protein
Position: -71
Score: 5.6
Sequence: AATTATCTGAAAATT
Locus tag: LACR_0783
Name: thrA
Funciton: Aspartokinase (EC 2.7.2.4)
LACR_0783
thrA
Aspartokinase (EC 2.7.2.4)
Position: -59
Score: 5.6
Sequence: AATTATCAGAAAATT
Locus tag: LACR_0619
Name: serC
Funciton: Phosphoserine aminotransferase (EC 2.6.1.52)
Locus tag: LACR_0620
Name: serA
Funciton: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
Locus tag: LACR_0621
Name: null
Funciton: Phosphoserine phosphatase (EC 3.1.3.3)
LACR_0619
serC
Phosphoserine aminotransferase (EC 2.6.1.52)
LACR_0620
serA
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
LACR_0621
Phosphoserine phosphatase (EC 3.1.3.3)
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