Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of MetJ in Shewanella sp W3-18-1

Properties
Regulator type: Transcription factor
TF locus tag: Sputw3181_3555
Regulator family: MetJ
Regulation mode: repressor
Biological process: Methionine biosynthesis; Methionine metabolism
Effector: S-adenosylmethionine
Regulog: MetJ - Shewanellaceae
Statistics of regulated genes:
- Genes 18
- Operons 14
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 397 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -48
Score: 5.3
Sequence: GGACATGT-(0)-GGACATCC
Position: -40
Score: 6.3
Sequence: GGACATCC-(0)-AGAAGTCT
Locus tag: Sputw3181_2707
Name: COG3126
Funciton: Lipoprotein-related protein
Locus tag: Sputw3181_2706
Name: metA
Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46)
Sputw3181_2707
COG3126
Lipoprotein-related protein
Sputw3181_2706
metA
Homoserine O-succinyltransferase (EC 2.3.1.46)
Position: -102
Score: 7.3
Sequence: AGACGTCT-(0)-AAACGTCT
Position: -47
Score: 7.2
Sequence: AGACGTCC-(0)-AGACATCT
Locus tag: Sputw3181_3554
Name: metB
Funciton: Cystathionine gamma-synthase (EC 2.5.1.48)
Locus tag: Sputw3181_3553
Name: metL
Funciton: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
Sputw3181_3554
metB
Cystathionine gamma-synthase (EC 2.5.1.48)
Sputw3181_3553
metL
Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
Position: -101
Score: 7.1
Sequence: AAACATCT-(0)-AGACGTCT
Position: -93
Score: 5.3
Sequence: AGACGTCT-(0)-AAATTGAC
Locus tag: Sputw3181_3252
Name: metT
Funciton: Methionine transporter MetT, NhaC antiporter family
Sputw3181_3252
metT
Methionine transporter MetT, NhaC antiporter family
Position: -59
Score: 5.8
Sequence: AGCCGTCT-(0)-AGATGTAG
Locus tag: Sputw3181_3302
Name: metK
Funciton: S-adenosylmethionine synthetase (EC 2.5.1.6)
Sputw3181_3302
metK
S-adenosylmethionine synthetase (EC 2.5.1.6)
Position: -110
Score: 5.5
Sequence: AAAATTTT-(0)-AGACTTCT
Position: -102
Score: 6.9
Sequence: AGACTTCT-(0)-AGATGTCT
Locus tag: Sputw3181_3244
Name: metY
Funciton: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
Sputw3181_3244
metY
O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
Position: -97
Score: 6.3
Sequence: GGGCGTCT-(0)-GGACGTCT
Position: -89
Score: 6.4
Sequence: GGACGTCT-(0)-AGAAGTTT
Locus tag: Sputw3181_0770
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
Sputw3181_0770
metR
Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
Position: -144
Score: 6.3
Sequence: GGACGTCT-(0)-ATACGTTT
Position: -136
Score: 5.7
Sequence: ATACGTTT-(0)-AAATGTCC
Locus tag: Sputw3181_0982
Name: metH
Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
Sputw3181_0982
metH
5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
Position: -181
Score: 7
Sequence: AGATGTCT-(0)-GGACGTCT
Position: -173
Score: 6
Sequence: GGACGTCT-(0)-AAATGTAC
Position: -134
Score: 5.6
Sequence: AGGCGTTA-(0)-AGACGTTT
Position: -126
Score: 7.3
Sequence: AGACGTTT-(0)-AGACGTCT
Position: -118
Score: 6.1
Sequence: AGACGTCT-(0)-AAACATAA
Locus tag: Sputw3181_3555
Name: metJ
Funciton: S-adenosylmethionine-responsive transcriptional repressor MetJ
Sputw3181_3555
metJ
S-adenosylmethionine-responsive transcriptional repressor MetJ
Position: -29
Score: 6.5
Sequence: AGCCATCT-(0)-AGACTTCT
Locus tag: Sputw3181_2125
Name: msrA
Funciton: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
Sputw3181_2125
msrA
Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
Position: -100
Score: 6
Sequence: GGACATGT-(0)-AGACGTCC
Position: -92
Score: 6.8
Sequence: AGACGTCC-(0)-AAACGTCC
Locus tag: Sputw3181_3552
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
Sputw3181_3552
metF
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
Position: -433
Score: 6.2
Sequence: ATCCGTAT-(0)-AGACGTCT
Position: -425
Score: 5.5
Sequence: AGACGTCT-(0)-ATAATGCT
Locus tag: Sputw3181_0767
Name: btuB
Funciton: TonB-dependent outer membrane transporter for vitamin B12
Sputw3181_0767
btuB
TonB-dependent outer membrane transporter for vitamin B12
Position: -147
Score: 5.8
Sequence: AGAAGTAT-(0)-AGATGCCT
Position: -139
Score: 5.5
Sequence: AGATGCCT-(0)-AGATGTGT
Locus tag: Sputw3181_3445
Name: pcbC
Funciton: putative 2OG-Fe(II) oxygenase
Locus tag: Sputw3181_3444
Name: mdeA2
Funciton: Methionine gamma-lyase (EC 4.4.1.11)
Sputw3181_3445
pcbC
putative 2OG-Fe(II) oxygenase
Sputw3181_3444
mdeA2
Methionine gamma-lyase (EC 4.4.1.11)
Position: -103
Score: 6.4
Sequence: AGCCATCT-(0)-AAACATCT
Position: -95
Score: 6
Sequence: AAACATCT-(0)-GGATGTTT
Locus tag: Sputw3181_0088
Name: mmuM
Funciton: Homocysteine S-methyltransferase (EC 2.1.1.10)
Locus tag: Sputw3181_0089
Name: mmuP
Funciton: S-methylmethionine transporter
Sputw3181_0088
mmuM
Homocysteine S-methyltransferase (EC 2.1.1.10)
Sputw3181_0089
mmuP
S-methylmethionine transporter
Position: -127
Score: 6.6
Sequence: AAACTTCT-(0)-AGACGTCC
Position: -119
Score: 6.5
Sequence: AGACGTCC-(0)-AGACGCCC
Locus tag: Sputw3181_0771
Name: metE
Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
Sputw3181_0771
metE
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
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