Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of MetJ in Shewanella piezotolerans WP3

Properties
Regulator type: Transcription factor
TF locus tag: swp_4558
Regulator family: MetJ
Regulation mode: repressor
Biological process: Methionine biosynthesis; Methionine metabolism
Effector: S-adenosylmethionine
Regulog: MetJ - Shewanellaceae
Statistics of regulated genes:
- Genes 13
- Operons 11
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 397 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -165
Score: 7.1
Sequence: AAACATCT-(0)-AGACGTCT
Position: -157
Score: 5.3
Sequence: AGACGTCT-(0)-AAATTGAC
Locus tag: swp_4410
Name: metT
Funciton: Methionine transporter MetT, NhaC antiporter family
metT
Methionine transporter MetT, NhaC antiporter family

Position: -101
Score: 6.3
Sequence: GGACGTCT-(0)-AAACGGCT
Position: -48
Score: 6.9
Sequence: AGACGTCC-(0)-AGACATCC
Locus tag: swp_4557
Name: metB
Funciton: Cystathionine gamma-synthase (EC 2.5.1.48)
Locus tag: swp_4556
Name: metL
Funciton: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
metB
Cystathionine gamma-synthase (EC 2.5.1.48)
metL
Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)

Position: -48
Score: 6.2
Sequence: GGACATAT-(0)-AGACTTCT
Position: -40
Score: 6.7
Sequence: AGACTTCT-(0)-AGAAGTCT
Position: -32
Score: 5.6
Sequence: AGAAGTCT-(0)-TGATGTAT
Locus tag: swp_3393
Name: COG3126
Funciton: Lipoprotein-related protein
Locus tag: swp_3392
Name: metA
Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46)
COG3126
Lipoprotein-related protein
metA
Homoserine O-succinyltransferase (EC 2.3.1.46)

Position: -60
Score: 5.8
Sequence: AGCCGTCT-(0)-AGATGTAG
Position: -52
Score: 5.2
Sequence: AGATGTAG-(0)-ATACTTCT
Locus tag: swp_4245
Name: metK
Funciton: S-adenosylmethionine synthetase (EC 2.5.1.6)
metK
S-adenosylmethionine synthetase (EC 2.5.1.6)

Position: -71
Score: 6.2
Sequence: AAACATTT-(0)-AGACTTCT
Position: -63
Score: 6.3
Sequence: AGACTTCT-(0)-AGATGGCT
Locus tag: swp_4408
Name: metY
Funciton: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
metY
O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)

Position: -97
Score: 7
Sequence: AGACTTCT-(0)-AGACGTCC
Position: -89
Score: 5.9
Sequence: AGACGTCC-(0)-AGATACCC
Locus tag: swp_1138
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
metR
Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family

Position: -128
Score: 6.3
Sequence: GGACGTCT-(0)-ATACGTAT
Position: -120
Score: 5.7
Sequence: ATACGTAT-(0)-AAATGTCC
Locus tag: swp_0992
Name: metH
Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
metH
5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)

Position: -177
Score: 6.6
Sequence: GGATGTCT-(0)-GGACGTCT
Position: -169
Score: 6
Sequence: GGACGTCT-(0)-AAATGTAC
Position: -124
Score: 6.6
Sequence: AGCCGTTT-(0)-AGACGTCC
Position: -116
Score: 5.8
Sequence: AGACGTCC-(0)-AAGCATTT
Locus tag: swp_4558
Name: metJ
Funciton: S-adenosylmethionine-responsive transcriptional repressor MetJ
metJ
S-adenosylmethionine-responsive transcriptional repressor MetJ

Position: -46
Score: 6.5
Sequence: AGACATCT-(0)-AGCCATCC
Position: -38
Score: 5.8
Sequence: AGCCATCC-(0)-AAACGGCT
Locus tag: swp_2608
Name: msrA
Funciton: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
msrA
Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)

Position: -401
Score: 5.8
Sequence: AGACATTT-(0)-AACCGTAT
Position: -393
Score: 6.5
Sequence: AACCGTAT-(0)-AGACGTCT
Locus tag: swp_3945
Name: btuB
Funciton: TonB-dependent outer membrane transporter for vitamin B12
btuB
TonB-dependent outer membrane transporter for vitamin B12

Position: -61
Score: 5.4
Sequence: AGCCGTTT-(0)-AGATGTTA
Position: -53
Score: 5.3
Sequence: AGATGTTA-(0)-AGATGGCT
Locus tag: swp_3096
Name: metC
Funciton: Cystathionine beta-lyase (EC 4.4.1.8)
metC
Cystathionine beta-lyase (EC 4.4.1.8)
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