Regulon of MetJ in Shewanella piezotolerans WP3

Properties
Regulator type:	Transcription factor
TF locus tag:	swp_4558
Regulator family:	MetJ
Regulation mode:	repressor
Biological process:	Methionine biosynthesis; Methionine metabolism
Effector:	S-adenosylmethionine
Regulog:	MetJ - Shewanellaceae
Statistics of regulated genes:
- Genes	13
- Operons	11
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 397 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - MetJ
By TF family - MetJ
By effector - S-adenosylmethionine
By pathway - Methionine biosynthesis
By pathway - Methionine metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -165 Score: 7.1 Sequence: AAACATCT-(0)-AGACGTCT Position: -157 Score: 5.3 Sequence: AGACGTCT-(0)-AAATTGAC Locus tag: swp_4410 Name: metT Funciton: Methionine transporter MetT, NhaC antiporter family
	swp_4410	metT	Methionine transporter MetT, NhaC antiporter family
Position: -101 Score: 6.3 Sequence: GGACGTCT-(0)-AAACGGCT Position: -48 Score: 6.9 Sequence: AGACGTCC-(0)-AGACATCC Locus tag: swp_4557 Name: metB Funciton: Cystathionine gamma-synthase (EC 2.5.1.48) Locus tag: swp_4556 Name: metL Funciton: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
	swp_4557	metB	Cystathionine gamma-synthase (EC 2.5.1.48)
	swp_4556	metL	Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
Position: -48 Score: 6.2 Sequence: GGACATAT-(0)-AGACTTCT Position: -40 Score: 6.7 Sequence: AGACTTCT-(0)-AGAAGTCT Position: -32 Score: 5.6 Sequence: AGAAGTCT-(0)-TGATGTAT Locus tag: swp_3393 Name: COG3126 Funciton: Lipoprotein-related protein Locus tag: swp_3392 Name: metA Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46)
	swp_3393	COG3126	Lipoprotein-related protein
	swp_3392	metA	Homoserine O-succinyltransferase (EC 2.3.1.46)
Position: -60 Score: 5.8 Sequence: AGCCGTCT-(0)-AGATGTAG Position: -52 Score: 5.2 Sequence: AGATGTAG-(0)-ATACTTCT Locus tag: swp_4245 Name: metK Funciton: S-adenosylmethionine synthetase (EC 2.5.1.6)
	swp_4245	metK	S-adenosylmethionine synthetase (EC 2.5.1.6)
Position: -71 Score: 6.2 Sequence: AAACATTT-(0)-AGACTTCT Position: -63 Score: 6.3 Sequence: AGACTTCT-(0)-AGATGGCT Locus tag: swp_4408 Name: metY Funciton: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
	swp_4408	metY	O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
Position: -97 Score: 7 Sequence: AGACTTCT-(0)-AGACGTCC Position: -89 Score: 5.9 Sequence: AGACGTCC-(0)-AGATACCC Locus tag: swp_1138 Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
	swp_1138	metR	Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
Position: -128 Score: 6.3 Sequence: GGACGTCT-(0)-ATACGTAT Position: -120 Score: 5.7 Sequence: ATACGTAT-(0)-AAATGTCC Locus tag: swp_0992 Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
	swp_0992	metH	5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
Position: -177 Score: 6.6 Sequence: GGATGTCT-(0)-GGACGTCT Position: -169 Score: 6 Sequence: GGACGTCT-(0)-AAATGTAC Position: -124 Score: 6.6 Sequence: AGCCGTTT-(0)-AGACGTCC Position: -116 Score: 5.8 Sequence: AGACGTCC-(0)-AAGCATTT Locus tag: swp_4558 Name: metJ Funciton: S-adenosylmethionine-responsive transcriptional repressor MetJ
	swp_4558	metJ	S-adenosylmethionine-responsive transcriptional repressor MetJ
Position: -46 Score: 6.5 Sequence: AGACATCT-(0)-AGCCATCC Position: -38 Score: 5.8 Sequence: AGCCATCC-(0)-AAACGGCT Locus tag: swp_2608 Name: msrA Funciton: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
	swp_2608	msrA	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
Position: -401 Score: 5.8 Sequence: AGACATTT-(0)-AACCGTAT Position: -393 Score: 6.5 Sequence: AACCGTAT-(0)-AGACGTCT Locus tag: swp_3945 Name: btuB Funciton: TonB-dependent outer membrane transporter for vitamin B12
	swp_3945	btuB	TonB-dependent outer membrane transporter for vitamin B12
Position: -61 Score: 5.4 Sequence: AGCCGTTT-(0)-AGATGTTA Position: -53 Score: 5.3 Sequence: AGATGTTA-(0)-AGATGGCT Locus tag: swp_3096 Name: metC Funciton: Cystathionine beta-lyase (EC 4.4.1.8)
	swp_3096	metC	Cystathionine beta-lyase (EC 4.4.1.8)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of MetJ in Shewanella piezotolerans WP3

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --