Regulon of MetJ in Shewanella pealeana ATCC 700345

Properties
Regulator type:	Transcription factor
TF locus tag:	Spea_0559
Regulator family:	MetJ
Regulation mode:	repressor
Biological process:	Methionine biosynthesis; Methionine metabolism
Effector:	S-adenosylmethionine
Regulog:	MetJ - Shewanellaceae
Statistics of regulated genes:
- Genes	14
- Operons	12
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 397 sites [see more]

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - MetJ
By TF family - MetJ
By effector - S-adenosylmethionine
By pathway - Methionine biosynthesis
By pathway - Methionine metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -100 Score: 7.1 Sequence: AAACATCT-(0)-AGACGTCT Position: -92 Score: 5.3 Sequence: AGACGTCT-(0)-AAATTGAC Locus tag: Spea_0677 Name: metT Funciton: Methionine transporter MetT, NhaC antiporter family
	Spea_0677	metT	Methionine transporter MetT, NhaC antiporter family
Position: -103 Score: 6.3 Sequence: GGACGTCT-(0)-AAACGGCT Position: -50 Score: 6.7 Sequence: AGCCGTCC-(0)-AGACATCT Locus tag: Spea_0560 Name: metB Funciton: Cystathionine gamma-synthase (EC 2.5.1.48) Locus tag: Spea_0561 Name: metL Funciton: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
	Spea_0560	metB	Cystathionine gamma-synthase (EC 2.5.1.48)
	Spea_0561	metL	Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
Position: -48 Score: 6 Sequence: GGACATAT-(0)-AGACTTCC Position: -40 Score: 6.5 Sequence: AGACTTCC-(0)-AGAAGTCT Position: -32 Score: 5.6 Sequence: AGAAGTCT-(0)-TGATGTAT Locus tag: Spea_2785 Name: COG3126 Funciton: Lipoprotein-related protein Locus tag: Spea_2784 Name: metA Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46)
	Spea_2785	COG3126	Lipoprotein-related protein
	Spea_2784	metA	Homoserine O-succinyltransferase (EC 2.3.1.46)
Position: -60 Score: 5.8 Sequence: AGCCGTCT-(0)-AGATGTAG Position: -52 Score: 5.2 Sequence: AGATGTAG-(0)-ATACTTCT Locus tag: Spea_0787 Name: metK Funciton: S-adenosylmethionine synthetase (EC 2.5.1.6)
	Spea_0787	metK	S-adenosylmethionine synthetase (EC 2.5.1.6)
Position: -97 Score: 6.3 Sequence: GGGCGTCT-(0)-GGACGTCT Position: -89 Score: 6.4 Sequence: GGACGTCT-(0)-AGAAGTTT Locus tag: Spea_3203 Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
	Spea_3203	metR	Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
Position: -268 Score: 6.3 Sequence: GGACGTCT-(0)-ATACGTAT Position: -260 Score: 5.7 Sequence: ATACGTAT-(0)-AAATGTCC Locus tag: Spea_3384 Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
	Spea_3384	metH	5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
Position: -68 Score: 6.4 Sequence: GGACATAT-(0)-AGACGTCC Position: -60 Score: 7.1 Sequence: AGACGTCC-(0)-AAACGTCT Locus tag: Spea_0562 Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
	Spea_0562	metF	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
Position: -177 Score: 6.3 Sequence: AGATGTCT-(0)-GGACGGCT Position: -124 Score: 6.6 Sequence: AGCCGTTT-(0)-AGACGTCC Locus tag: Spea_0559 Name: metJ Funciton: S-adenosylmethionine-responsive transcriptional repressor MetJ
	Spea_0559	metJ	S-adenosylmethionine-responsive transcriptional repressor MetJ
Position: -53 Score: 6.5 Sequence: AGACATCT-(0)-AGCCATCC Position: -45 Score: 5.8 Sequence: AGCCATCC-(0)-AAACGGCT Locus tag: Spea_2248 Name: msrA Funciton: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
	Spea_2248	msrA	Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
Position: -458 Score: 5.8 Sequence: AGACATTT-(0)-AACCGTAT Position: -450 Score: 6.5 Sequence: AACCGTAT-(0)-AGACGTCT Locus tag: Spea_3206 Name: btuB Funciton: TonB-dependent outer membrane transporter for vitamin B12
	Spea_3206	btuB	TonB-dependent outer membrane transporter for vitamin B12
Position: -10 Score: 5.4 Sequence: AGCCGTTT-(0)-AGATGTTA Position: -2 Score: 5.3 Sequence: AGATGTTA-(0)-AGATGGCT Locus tag: Spea_2520 Name: metC Funciton: Cystathionine beta-lyase (EC 4.4.1.8)
	Spea_2520	metC	Cystathionine beta-lyase (EC 4.4.1.8)
Position: -104 Score: 6.6 Sequence: AAACTTCT-(0)-AGACGTCC Position: -96 Score: 6.5 Sequence: AGACGTCC-(0)-AGACGCCC Locus tag: Spea_3202 Name: metE Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
	Spea_3202	metE	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulon of MetJ in Shewanella pealeana ATCC 700345

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --