Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of MetJ in Shewanella frigidimarina NCIMB 400

Properties
Regulator type: Transcription factor
TF locus tag: Sfri_3552
Regulator family: MetJ
Regulation mode: repressor
Biological process: Methionine biosynthesis; Methionine metabolism
Effector: S-adenosylmethionine
Regulog: MetJ - Shewanellaceae
Statistics of regulated genes:
- Genes 11
- Operons 10
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 397 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -187
Score: 7.2
Sequence: AGAAGTCT-(0)-AGACGTCT
Position: -179
Score: 5.6
Sequence: AGACGTCT-(0)-AGATTGAC
Locus tag: Sfri_0570
Name: metT
Funciton: Methionine transporter MetT, NhaC antiporter family
Sfri_0570
metT
Methionine transporter MetT, NhaC antiporter family
Position: -284
Score: 6.4
Sequence: AGACGTGT-(0)-AGACTTCT
Position: -276
Score: 6.3
Sequence: AGACTTCT-(0)-AGCCATCC
Locus tag: Sfri_1336
Name: metA
Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46)
Sfri_1336
metA
Homoserine O-succinyltransferase (EC 2.3.1.46)
Position: -102
Score: 7.3
Sequence: AGACGTCT-(0)-AAACGTCT
Position: -49
Score: 7.1
Sequence: GGACGTCT-(0)-AGACATCT
Locus tag: Sfri_3551
Name: metB
Funciton: Cystathionine gamma-synthase (EC 2.5.1.48)
Locus tag: Sfri_3550
Name: metL
Funciton: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
Sfri_3551
metB
Cystathionine gamma-synthase (EC 2.5.1.48)
Sfri_3550
metL
Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
Position: -47
Score: 7.3
Sequence: AGACGTCT-(0)-AGACGTAT
Locus tag: Sfri_0646
Name: metK
Funciton: S-adenosylmethionine synthetase (EC 2.5.1.6)
Sfri_0646
metK
S-adenosylmethionine synthetase (EC 2.5.1.6)
Position: -75
Score: 6.3
Sequence: AGACTTCT-(0)-AGATGGCT
Locus tag: Sfri_3160
Name: metY
Funciton: O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
Sfri_3160
metY
O-acetylhomoserine sulfhydrylase (EC 2.5.1.49) / O-succinylhomoserine sulfhydrylase (EC 2.5.1.48)
Position: -97
Score: 6.7
Sequence: AGGCGTCT-(0)-GGACGTCT
Position: -89
Score: 6.4
Sequence: GGACGTCT-(0)-AGAAGTTT
Locus tag: Sfri_0826
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
Sfri_0826
metR
Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
Position: -229
Score: 6.3
Sequence: GGACGTCT-(0)-ATACGTTT
Position: -221
Score: 5.7
Sequence: ATACGTTT-(0)-ATATGTCT
Locus tag: Sfri_0872
Name: metH
Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
Sfri_0872
metH
5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
Position: -176
Score: 7.1
Sequence: AGATGTCT-(0)-AGACGTCC
Position: -168
Score: 5.6
Sequence: AGACGTCC-(0)-AAATTTAC
Position: -123
Score: 7.3
Sequence: AGACGTTT-(0)-AGACGTCT
Position: -115
Score: 6.5
Sequence: AGACGTCT-(0)-AAACATCA
Position: -107
Score: 5.7
Sequence: AAACATCA-(0)-AGAAATCT
Locus tag: Sfri_3552
Name: metJ
Funciton: S-adenosylmethionine-responsive transcriptional repressor MetJ
Sfri_3552
metJ
S-adenosylmethionine-responsive transcriptional repressor MetJ
Position: -102
Score: 6.4
Sequence: GGACATAT-(0)-AGACGTCC
Position: -94
Score: 6.5
Sequence: AGACGTCC-(0)-AAACGGCT
Locus tag: Sfri_3547
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
Sfri_3547
metF
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
Position: -39
Score: 6.5
Sequence: AGCCATCT-(0)-AGACTTCT
Locus tag: Sfri_1933
Name: msrA
Funciton: Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
Sfri_1933
msrA
Peptide methionine sulfoxide reductase MsrA (EC 1.8.4.11)
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