Regulon of NarP in Haemophilus somnus 2336
| Regulator type: | Transcription factor |
| TF locus tag: | HSM_1935 |
| Regulator family: | LuxR |
| Regulation mode: | activator (repressor) |
| Biological process: | Nitrate and nitrite respiration |
| Effector: | Nitrite; Nitrate |
| Regulog: | NarP - Pasteurellales |
| Statistics of regulated genes: | |
| - Genes | 24 |
| - Operons | 7 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Pasteurellales
- By trascription factor - NarP
- By TF family - LuxR
- By effector - Nitrite
- By effector - Nitrate
- By pathway - Nitrate and nitrite respiration
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -51
Score: 4 Sequence: TACCACTAAATGATTA
Locus tag: HSM_0381
Name: pckA Funciton: Phosphoenolpyruvate carboxykinase (EC 4.1.1.49) |
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pckA
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Phosphoenolpyruvate carboxykinase (EC 4.1.1.49)
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Position: -108
Score: 4 Sequence: TAACAAAAAAGAGTTA
Locus tag: HSM_0782
Name: frdA Funciton: Fumarate reductase subunit A (EC 1.3.5.4)
Locus tag: HSM_0781
Name: frdB Funciton: Fumarate reductase subunit B (EC 1.3.5.4)
Locus tag: HSM_0780
Name: frdC Funciton: Fumarate reductase subunit C (EC 1.3.5.4)
Locus tag: HSM_0779
Name: frdD Funciton: Fumarate reductase subunit D (EC 1.3.5.4) |
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frdA
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Fumarate reductase subunit A (EC 1.3.5.4)
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frdB
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Fumarate reductase subunit B (EC 1.3.5.4)
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frdC
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Fumarate reductase subunit C (EC 1.3.5.4)
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frdD
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Fumarate reductase subunit D (EC 1.3.5.4)
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Position: -96
Score: 3.8 Sequence: TACAACTAAAGAGTTA
Locus tag: HSM_0718
Name: ccmA Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: HSM_0719
Name: ccmB Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: HSM_0720
Name: ccmC Funciton: Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: HSM_0721
Name: ccmD Funciton: Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: HSM_0722
Name: ccmE Funciton: Cytochrome c-type biogenesis protein CcmE, heme chaperone
Locus tag: HSM_0723
Name: ccmF Funciton: Cytochrome c heme lyase, subunit CcmF
Locus tag: HSM_0724
Name: ccmG Funciton: Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
Locus tag: HSM_0725
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH
Locus tag: HSM_0726
Name: ccmH Funciton: Cytochrome c heme lyase, subunit CcmH |
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ccmA
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ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
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ccmB
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ABC transporter involved in cytochrome c biogenesis, CcmB subunit
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ccmC
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Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
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ccmD
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Cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
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ccmE
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Cytochrome c-type biogenesis protein CcmE, heme chaperone
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ccmF
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Cytochrome c heme lyase, subunit CcmF
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ccmG
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Cytochrome c-type biogenesis protein CcmG/DsbE, thiol:disulfide oxidoreductase
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ccmH
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Cytochrome c heme lyase, subunit CcmH
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ccmH
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Cytochrome c heme lyase, subunit CcmH
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Position: -219
Score: 3.7 Sequence: TTACTTTTAGTAGTAA
Position: -197
Score: 4.5 Sequence: TACCGTTTTTGGGTTA
Locus tag: HSM_0129
Name: cydA Funciton: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
Locus tag: HSM_0130
Name: cydB Funciton: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-) |
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cydA
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Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
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cydB
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Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)
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Position: -139
Score: 4.5 Sequence: TACTCATTTTTGGTTA
Locus tag: HSM_0492
Name: napD Funciton: Periplasmic nitrate reductase component NapD
Locus tag: HSM_0493
Name: napA Funciton: Periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: HSM_0494
Name: napG Funciton: Periplasmic nitrate reductase, ferredoxin-type protein NapG
Locus tag: HSM_0495
Name: napH Funciton: Periplasmic nitrate reductase, polyferredoxin NapH
Locus tag: HSM_0496
Name: napB Funciton: Nitrate reductase cytochrome c550-type subunit
Locus tag: HSM_0497
Name: napC Funciton: Cytochrome c-type protein NapC |
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napD
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Periplasmic nitrate reductase component NapD
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napA
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Periplasmic nitrate reductase precursor (EC 1.7.99.4)
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napG
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Periplasmic nitrate reductase, ferredoxin-type protein NapG
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napH
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Periplasmic nitrate reductase, polyferredoxin NapH
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napB
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Nitrate reductase cytochrome c550-type subunit
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napC
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Cytochrome c-type protein NapC
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Position: -35
Score: 3.9 Sequence: TACTTATTTTAGATTA
Locus tag: HSM_1613
Name: eno Funciton: Enolase (EC 4.2.1.11) |
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eno
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Enolase (EC 4.2.1.11)
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Position: -193
Score: 4.3 Sequence: TAATCATTAAGAGGTA
Locus tag: HSM_1119
Name: lctP Funciton: L-lactate permease |
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lctP
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L-lactate permease
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |