Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Crp in Shewanella frigidimarina NCIMB 400

Properties
Regulator type: Transcription factor
TF locus tag: Sfri_3292
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Regulog: Crp - Shewanellaceae
Statistics of regulated genes:
- Genes 233
- Operons 120
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 2713 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -104
Score: 3.9
Sequence: AAGTTAGAATCAGATCACACTT
Locus tag: Sfri_2677
Name: fadI
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Locus tag: Sfri_2676
Name: fadJ
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
Sfri_2677
fadI
3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Sfri_2676
fadJ
Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
Position: -226
Score: 4
Sequence: AATTGGGATCTTAGTCACTCTA
Locus tag: Sfri_3874
Name: prlC
Funciton: Oligopeptidase A (EC 3.4.24.70)
Sfri_3874
prlC
Oligopeptidase A (EC 3.4.24.70)
Position: -148
Score: 4.7
Sequence: TAATGTGATAATACTCACTATT
Locus tag: Sfri_2779
Name: icd
Funciton: Isocitrate dehydrogenase [NAD] (EC 1.1.1.41)
Sfri_2779
icd
Isocitrate dehydrogenase [NAD] (EC 1.1.1.41)
Position: -288
Score: 4.3
Sequence: AAGTATGAATCAGCTCACACTA
Locus tag: Sfri_3772
Name: yniC
Funciton: 2-deoxyglucose-6-phosphate hydrolase YniC
Sfri_3772
yniC
2-deoxyglucose-6-phosphate hydrolase YniC
Position: -160
Score: 4.3
Sequence: ATAAGTGATCTAGTACTCACTT
Position: -99
Score: 4.2
Sequence: AAACATGATCTGGTTCAAATCA
Locus tag: Sfri_3316
Name: null
Funciton: hypothetical protein
Sfri_3316
hypothetical protein
Position: -135
Score: 5.2
Sequence: TTTTATGATTTAGATCACAAAA
Locus tag: Sfri_0491
Name: SO0439
Funciton: hypothetical protein
Sfri_0491
SO0439
hypothetical protein
Position: -313
Score: 3.8
Sequence: TTTTGAGACTTATCACACCAAT
Locus tag: Sfri_3630
Name: SO3588
Funciton: gpr1/fun34/yaaH family protein
Sfri_3630
SO3588
gpr1/fun34/yaaH family protein
Position: -90
Score: 4
Sequence: TTTTTTGCCACATATAACAAAA
Locus tag: Sfri_2440
Name: SO1482
Funciton: tonB-dependent receptor, putative
Sfri_2440
SO1482
tonB-dependent receptor, putative
Position: -275
Score: 3.9
Sequence: TAATCTGATCCGGCTAACACCT
Position: -253
Score: 3.8
Sequence: AATATTAACCGCTTTCACAAAT
Locus tag: Sfri_3324
Name: bfd
Funciton: bacterioferritin-associated ferredoxin
Sfri_3324
bfd
bacterioferritin-associated ferredoxin
Position: -334
Score: 4.6
Sequence: AAATGTGATTCAAAGCAGATAA
Position: -234
Score: 4.3
Sequence: TTTCATGATGTAAGTCTCATTA
Position: -156
Score: 5
Sequence: TGACGTGATATCGCTCACAAAT
Locus tag: Sfri_3632
Name: cadC
Funciton: transcriptional regulator-related protein
Locus tag: Sfri_3631
Name: SO0941
Funciton: hypothetical protein
Sfri_3632
cadC
transcriptional regulator-related protein
Sfri_3631
SO0941
hypothetical protein
Position: -7
Score: 4.1
Sequence: AAGTGTAATGAAATCCACAATA
Locus tag: Sfri_0385
Name: SO0296
Funciton: integral membrane domain protein
Sfri_0385
SO0296
integral membrane domain protein
Position: -166
Score: 4.2
Sequence: AAATGAGATTTACATCACGCTG
Position: -142
Score: 4.3
Sequence: AAATGTGACCTTGCACAACTAT
Locus tag: Sfri_0553
Name: napA
Funciton: periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: Sfri_0552
Name: napB
Funciton: nitrate reductase cytochrome c550-type subunit
Sfri_0553
napA
periplasmic nitrate reductase precursor (EC 1.7.99.4)
Sfri_0552
napB
nitrate reductase cytochrome c550-type subunit
Position: -129
Score: 4.2
Sequence: TTTTGTGAGCTAATTGGCAATT
Locus tag: Sfri_0507
Name: Sputcn32_0777
Funciton: hypothetical protein
Sfri_0507
Sputcn32_0777
hypothetical protein
Position: -129
Score: 3.8
Sequence: CACTATGATCTGGTTCTAATTT
Locus tag: Sfri_3307
Name: petA
Funciton: ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2)
Locus tag: Sfri_3306
Name: petB
Funciton: ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2)
Locus tag: Sfri_3305
Name: petC
Funciton: ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit
Locus tag: Sfri_3304
Name: sspA
Funciton: stringent starvation protein A
Locus tag: Sfri_3303
Name: sspB
Funciton: stringent starvation protein B
Sfri_3307
petA
ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2)
Sfri_3306
petB
ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2)
Sfri_3305
petC
ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit
Sfri_3304
sspA
stringent starvation protein A
Sfri_3303
sspB
stringent starvation protein B
Position: -242
Score: 4.6
Sequence: AATTGTGATCTGTACCTAATTT
Locus tag: Sfri_2257
Name: icd
Funciton: isocitrate dehydrogenase [NADP] (EC 1.1.1.42); monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
Sfri_2257
icd
isocitrate dehydrogenase [NADP] (EC 1.1.1.42); monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
Position: -107
Score: 4
Sequence: AAACGTGACCGTAAGCTCAAAA
Locus tag: Sfri_3973
Name: SO0075
Funciton: long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Sfri_3973
SO0075
long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -146
Score: 4.2
Sequence: AGTCGCGACATTGTTCACAAAA
Locus tag: Sfri_1001
Name: tsx
Funciton: nucleoside-specific channel-forming protein, Tsx
Sfri_1001
tsx
nucleoside-specific channel-forming protein, Tsx
Position: -125
Score: 4.1
Sequence: TTTTATGACTTAGGTCAACTTA
Locus tag: Sfri_2271
Name: Sfri_2271
Funciton: permease of the major facilitator superfamily
Locus tag: Sfri_2272
Name: Sfri_2272
Funciton: hypothetical protein
Locus tag: Sfri_2273
Name: Sfri_2273
Funciton: nitrogen regulatory protein P-II
Locus tag: Sfri_2274
Name: Sfri_2274
Funciton: hypothetical protein
Sfri_2271
Sfri_2271
permease of the major facilitator superfamily
Sfri_2272
Sfri_2272
hypothetical protein
Sfri_2273
Sfri_2273
nitrogen regulatory protein P-II
Sfri_2274
Sfri_2274
hypothetical protein
Position: -184
Score: 4.3
Sequence: ATAAGTGCTATTAGTCACAAAT
Locus tag: Sfri_0225
Name: Sputcn32_3857
Funciton: hypothetical protein
Locus tag: Sfri_0224
Name: Sputcn32_3858
Funciton: cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-)
Locus tag: Sfri_0223
Name: Sputcn32_3859
Funciton: cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-)
Locus tag: Sfri_0222
Name: Sputcn32_3860
Funciton: cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-)
Locus tag: Sfri_0221
Name: Sputcn32_3861
Funciton: cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-)
Locus tag: Sfri_0220
Name: Sputcn32_3862
Funciton: heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB
Sfri_0225
Sputcn32_3857
hypothetical protein
Sfri_0224
Sputcn32_3858
cytochrome O ubiquinol oxidase subunit II (EC 1.10.3.-)
Sfri_0223
Sputcn32_3859
cytochrome O ubiquinol oxidase subunit I (EC 1.10.3.-)
Sfri_0222
Sputcn32_3860
cytochrome O ubiquinol oxidase subunit III (EC 1.10.3.-)
Sfri_0221
Sputcn32_3861
cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-)
Sfri_0220
Sputcn32_3862
heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB
Position: -303
Score: 4.1
Sequence: TATTGTTATTTAGACAAAATAA
Locus tag: Sfri_3757
Name: SO4118
Funciton: NADP-dependent malic enzyme (EC 1.1.1.40)
Locus tag: Sfri_3756
Name: mshH
Funciton: MSHA biogenesis protein MshH, GGDEF:EAL domain protein
Locus tag: Sfri_3755
Name: mshI
Funciton: MSHA biogenesis protein MshI
Sfri_3757
SO4118
NADP-dependent malic enzyme (EC 1.1.1.40)
Sfri_3756
mshH
MSHA biogenesis protein MshH, GGDEF:EAL domain protein
Sfri_3755
mshI
MSHA biogenesis protein MshI
Position: -125
Score: 4.2
Sequence: TTTCGGGATCTAGTTCAAAGTT
Locus tag: Sfri_0052
Name: null
Funciton: hypothetical protein
Locus tag: Sfri_0053
Name: SO4505
Funciton: hypothetical protein probably related to Formate dehydrogenase function
Locus tag: Sfri_0054
Name: SO4506
Funciton: iron-sulfur cluster-binding protein
Locus tag: Sfri_0055
Name: SO4507
Funciton: putative formate dehydrogenase-specific chaperone
Locus tag: Sfri_0056
Name: SO4508
Funciton: formate dehydrogenase subunit or accessory protein
Locus tag: Sfri_0057
Name: SO4509
Funciton: formate dehydrogenase-O, major subunit (EC 1.2.1.2)
Locus tag: Sfri_0058
Name: fdhB-1
Funciton: formate dehydrogenase-O, iron-sulfur subunit (EC 1.2.1.2); putative formate dehydrogenase iron-sulfur subunit (EC 1.2.1.2)
Locus tag: Sfri_0059
Name: SO4511
Funciton: formate dehydrogenase -O, gamma subunit (EC 1.2.1.2)
Sfri_0052
hypothetical protein
Sfri_0053
SO4505
hypothetical protein probably related to Formate dehydrogenase function
Sfri_0054
SO4506
iron-sulfur cluster-binding protein
Sfri_0055
SO4507
putative formate dehydrogenase-specific chaperone
Sfri_0056
SO4508
formate dehydrogenase subunit or accessory protein
Sfri_0057
SO4509
formate dehydrogenase-O, major subunit (EC 1.2.1.2)
Sfri_0058
fdhB-1
formate dehydrogenase-O, iron-sulfur subunit (EC 1.2.1.2); putative formate dehydrogenase iron-sulfur subunit (EC 1.2.1.2)
Sfri_0059
SO4511
formate dehydrogenase -O, gamma subunit (EC 1.2.1.2)
Position: -122
Score: 5
Sequence: TAATGTGATTTTACTCACTTAA
Locus tag: Sfri_0833
Name: sfcA
Funciton: NAD-dependent malic enzyme (EC 1.1.1.38)
Sfri_0833
sfcA
NAD-dependent malic enzyme (EC 1.1.1.38)
Position: -256
Score: 5
Sequence: TTTGGTGACATAGATCACATAT
Locus tag: Sfri_3097
Name: fadD-2
Funciton: long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Sfri_3097
fadD-2
long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -116
Score: 4.5
Sequence: TAATGTGATGATAATTATATTA
Locus tag: Sfri_3674
Name: SO3553
Funciton: putative sulfate permease
Sfri_3674
SO3553
putative sulfate permease
Position: -37
Score: 4.2
Sequence: ATATTTGAACATGGTCAAATAT
Position: -7
Score: 4.1
Sequence: AAATGTGATGGAGTTAGTATCT
Locus tag: Sfri_3188
Name: cobA
Funciton: uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: Sfri_3187
Name: cysD
Funciton: sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)
Locus tag: Sfri_3186
Name: cysN
Funciton: sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)
Locus tag: Sfri_3185
Name: Shew_1424
Funciton: sulfate permease, Trk-type
Locus tag: Sfri_3184
Name: cysC
Funciton: adenylylsulfate kinase (EC 2.7.1.25)
Sfri_3188
cobA
uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Sfri_3187
cysD
sulfate adenylyltransferase subunit 2 (EC 2.7.7.4)
Sfri_3186
cysN
sulfate adenylyltransferase subunit 1 (EC 2.7.7.4)
Sfri_3185
Shew_1424
sulfate permease, Trk-type
Sfri_3184
cysC
adenylylsulfate kinase (EC 2.7.1.25)
Position: -172
Score: 3.8
Sequence: TTCAGTGAACAAAATCAAACAA
Position: -131
Score: 4.1
Sequence: TTGAGTGTCCAAGTTCACATTT
Locus tag: Sfri_0568
Name: SO3774
Funciton: proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)
Sfri_0568
SO3774
proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)
Position: -116
Score: 4.5
Sequence: TAATGTGATGATAATTATATTA
Locus tag: Sfri_3674
Name: SO3553
Funciton: putative sulfate permease
Sfri_3674
SO3553
putative sulfate permease
Position: -133
Score: 4.1
Sequence: TGATTTGATTTTGATCACTAAG
Locus tag: Sfri_0938
Name: SO3681
Funciton: universal stress protein family
Sfri_0938
SO3681
universal stress protein family
Position: -101
Score: 4.6
Sequence: AAATGTGAACTAAAGCAAAATT
Locus tag: Sfri_2179
Name: gloA
Funciton: lactoylglutathione lyase (EC 4.4.1.5)
Sfri_2179
gloA
lactoylglutathione lyase (EC 4.4.1.5)
Position: -213
Score: 3.8
Sequence: AAACGTTAAATCCATTACATTA
Position: -41
Score: 3.7
Sequence: TTTAATGATGCGATTCAGAGAT
Locus tag: Sfri_2098
Name: gloA
Funciton: lactoylglutathione lyase (EC 4.4.1.5)
Sfri_2098
gloA
lactoylglutathione lyase (EC 4.4.1.5)
Position: -181
Score: 4.3
Sequence: AAATATTAGCCTGATCACATTA
Locus tag: Sfri_3945
Name: cytcB
Funciton: diheme cytochrome c4
Sfri_3945
cytcB
diheme cytochrome c4
Position: -213
Score: 4.2
Sequence: TTTTGTGATAACAATCTCAGCT
Locus tag: Sfri_0179
Name: ccmA
Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: Sfri_0178
Name: ccmB
Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: Sfri_0177
Name: ccmC
Funciton: cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: Sfri_0176
Name: ccmD
Funciton: cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: Sfri_0175
Name: ccmE
Funciton: cytochrome c-type biogenesis protein CcmE, heme chaperone
Sfri_0179
ccmA
ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Sfri_0178
ccmB
ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Sfri_0177
ccmC
cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Sfri_0176
ccmD
cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Sfri_0175
ccmE
cytochrome c-type biogenesis protein CcmE, heme chaperone
Position: -307
Score: 4.4
Sequence: AGTCGCGATCTACATCAAATAA
Position: -140
Score: 4.2
Sequence: TTATATGAGATATATCGCCTTT
Locus tag: Sfri_3603
Name: SO1821
Funciton: outer membrane porin, putative
Sfri_3603
SO1821
outer membrane porin, putative
Position: -142
Score: 4
Sequence: TTTTGCGATCCCAACCTCAAAA
Locus tag: Sfri_0404
Name: ygbA
Funciton: nitrosative stress induced protein
Sfri_0404
ygbA
nitrosative stress induced protein
Position: -85
Score: 4.1
Sequence: TATAGTGACTTCAATCACAACG
Locus tag: Sfri_0421
Name: ilvC
Funciton: Ketol-acid reductoisomerase (EC 1.1.1.86)
Sfri_0421
ilvC
Ketol-acid reductoisomerase (EC 1.1.1.86)
Position: -233
Score: 3.9
Sequence: CAATTTGATATGGTTCCAAAAT
Position: -133
Score: 4.1
Sequence: AGCTGAGATTGTTATCACAAAA
Locus tag: Sfri_0180
Name: scyA
Funciton: cytochrome c-type protein
Sfri_0180
scyA
cytochrome c-type protein
Position: -237
Score: 4.9
Sequence: TTTTGTGATGCAGATCTCAATC
Locus tag: Sfri_1546
Name: SO2858
Funciton: hypothetical protein
Locus tag: Sfri_1547
Name: SO2857
Funciton: sodium solute symporter family protein
Locus tag: Sfri_1548
Name: SO2856
Funciton: predicted signal-transduction protein containing cAMP-binding and CBS domains
Locus tag: Sfri_1549
Name: SO2855
Funciton: DNA polymerase III epsilon subunit (EC 2.7.7.7)
Sfri_1546
SO2858
hypothetical protein
Sfri_1547
SO2857
sodium solute symporter family protein
Sfri_1548
SO2856
predicted signal-transduction protein containing cAMP-binding and CBS domains
Sfri_1549
SO2855
DNA polymerase III epsilon subunit (EC 2.7.7.7)
Position: -139
Score: 4.6
Sequence: TAGTGTGAGCTGATTCATACTT
Locus tag: Sfri_3771
Name: acnB
Funciton: aconitate hydratase 2 (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99)
Sfri_3771
acnB
aconitate hydratase 2 (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99)
Position: -240
Score: 4.2
Sequence: AAATCTAATGCTGGTCACATAA
Locus tag: Sfri_1142
Name: cydA
Funciton: cytochrome d ubiquinol oxidase, subunit I, CydA
Locus tag: Sfri_1143
Name: cydB
Funciton: cytochrome d ubiquinol oxidase, subunit II, CydB
Sfri_1142
cydA
cytochrome d ubiquinol oxidase, subunit I, CydA
Sfri_1143
cydB
cytochrome d ubiquinol oxidase, subunit II, CydB
Position: -244
Score: 4.7
Sequence: TAACTTGATGTAAATCACGTTA
Position: -92
Score: 4.8
Sequence: ATATGTGATCAAGTTAACCTTA
Locus tag: Sfri_3403
Name: udp
Funciton: Uridine phosphorylase (EC 2.4.2.3)
Sfri_3403
udp
Uridine phosphorylase (EC 2.4.2.3)
Position: -140
Score: 3.9
Sequence: AAACAGGATGTATCTCACAGTT
Locus tag: Sfri_0621
Name: narQ
Funciton: Nitrate/nitrite sensor protein (EC 2.7.3.-)
Locus tag: Sfri_0620
Name: narP
Funciton: Nitrate/nitrite response regulator protein
Sfri_0621
narQ
Nitrate/nitrite sensor protein (EC 2.7.3.-)
Sfri_0620
narP
Nitrate/nitrite response regulator protein
Position: -200
Score: 4
Sequence: ATATTTGATCACAAGCACACTC
Locus tag: Sfri_3534
Name: SO0543
Funciton: hypothetical protein
Sfri_3534
SO0543
hypothetical protein
Position: -313
Score: 4.7
Sequence: AATAGTGAGTATTATCACATTA
Locus tag: Sfri_2778
Name: SO1539
Funciton: Probable acylaminoacyl-peptidase (EC 3.4.19.1)
Sfri_2778
SO1539
Probable acylaminoacyl-peptidase (EC 3.4.19.1)
Position: -129
Score: 3.8
Sequence: AAATGCTACGATGATCACCATT
Position: -100
Score: 3.9
Sequence: AAATGTGATCTTGATTGGCAAA
Locus tag: Sfri_0441
Name: cyaA
Funciton: Adenylate cyclase (EC 4.6.1.1)
Sfri_0441
cyaA
Adenylate cyclase (EC 4.6.1.1)
Position: -214
Score: 4.2
Sequence: TATTGTGTTGCAATTAACAATG
Position: -104
Score: 5
Sequence: AAATGTGAATCAGATAACATTT
Locus tag: Sfri_3213
Name: cydD
Funciton: Transport ATP-binding protein CydD
Locus tag: Sfri_3212
Name: cydC
Funciton: Transport ATP-binding protein CydC
Sfri_3213
cydD
Transport ATP-binding protein CydD
Sfri_3212
cydC
Transport ATP-binding protein CydC
Position: -137
Score: 4.1
Sequence: AACTGGTATTTTGATCACATTT
Locus tag: Sfri_3299
Name: astC
Funciton: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81)
Locus tag: Sfri_3298
Name: astA
Funciton: Arginine N-succinyltransferase (EC 2.3.1.109)
Locus tag: Sfri_3297
Name: astD
Funciton: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
Locus tag: Sfri_3296
Name: SO0620
Funciton: FIG008480: hypothetical protein
Sfri_3299
astC
Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81)
Sfri_3298
astA
Arginine N-succinyltransferase (EC 2.3.1.109)
Sfri_3297
astD
Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
Sfri_3296
SO0620
FIG008480: hypothetical protein
Position: -51
Score: 4.3
Sequence: TTGTGTTACCTAGCACACATAT
Locus tag: Sfri_0361
Name: SO0355
Funciton: long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Locus tag: Sfri_0360
Name: SO0354
Funciton: inner membrane protein YrbG, predicted calcium/sodium:proton antiporter
Sfri_0361
SO0355
long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Sfri_0360
SO0354
inner membrane protein YrbG, predicted calcium/sodium:proton antiporter
Position: -203
Score: 3.9
Sequence: ATTATTGATCTCATTCACAAGA
Locus tag: Sfri_1870
Name: SO2535
Funciton: Predicted glutamine amidotransferase
Sfri_1870
SO2535
Predicted glutamine amidotransferase
Position: -181
Score: 4.3
Sequence: AAATATTAGCCTGATCACATTA
Locus tag: Sfri_3945
Name: cytcB
Funciton: Cytochrome c4
Sfri_3945
cytcB
Cytochrome c4
Position: -125
Score: 4
Sequence: GAAGGTGATGTGGCTCATAAAA
Locus tag: Sfri_3609
Name: hcp
Funciton: Hydroxylamine reductase (EC 1.7.-.-)
Locus tag: Sfri_3608
Name: hcr
Funciton: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Sfri_3609
hcp
Hydroxylamine reductase (EC 1.7.-.-)
Sfri_3608
hcr
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
Position: -104
Score: 4.7
Sequence: TAATGTGATCAGGCTAATATTT
Locus tag: Sfri_3944
Name: engB
Funciton: GTP-binding protein EngB
Sfri_3944
engB
GTP-binding protein EngB
Position: -148
Score: 4
Sequence: TAGAGTGACTAAGATCCCAATT
Locus tag: Sfri_3875
Name: null
Funciton: hypothetical protein
Sfri_3875
hypothetical protein
Position: -126
Score: 3.5
Sequence: TTTGTTGATCTTTACCACTAAA
Position: -106
Score: 5
Sequence: AATTGTAAGTTAGATCACATAT
Locus tag: Sfri_2326
Name: hmgA
Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
Sfri_2326
hmgA
Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
Position: -111
Score: 4.9
Sequence: TGTTGTGATCTATATCAAGTTA
Locus tag: Sfri_1948
Name: Sbal_1323
Funciton: HTH-type transcriptional regulator BetI
Locus tag: Sfri_1947
Name: Sbal_1324
Funciton: betaine aldehyde dehydrogenase (EC 1.2.1.8)
Locus tag: Sfri_1946
Name: Sbal_1325
Funciton: choline dehydrogenase (EC 1.1.99.1)
Locus tag: Sfri_1945
Name: Sden_0716
Funciton: predicted choline transporter BetT-II
Locus tag: Sfri_1944
Name: Sbal_1327
Funciton: conserved hypothetical protein 2001
Locus tag: Sfri_1943
Name: marR
Funciton: transcriptional regulator, MarR family
Sfri_1948
Sbal_1323
HTH-type transcriptional regulator BetI
Sfri_1947
Sbal_1324
betaine aldehyde dehydrogenase (EC 1.2.1.8)
Sfri_1946
Sbal_1325
choline dehydrogenase (EC 1.1.99.1)
Sfri_1945
Sden_0716
predicted choline transporter BetT-II
Sfri_1944
Sbal_1327
conserved hypothetical protein 2001
Sfri_1943
marR
transcriptional regulator, MarR family
Position: -55
Score: 4
Sequence: AAGTGTGACTAAGGTTACCATT
Locus tag: Sfri_1487
Name: SO2589
Funciton: isopenicillin N synthase
Sfri_1487
SO2589
isopenicillin N synthase
Position: -146
Score: 4.1
Sequence: ATAGTTGATTCAGAACACATTA
Locus tag: Sfri_0688
Name: SO0919
Funciton: Serine transporter, putative
Locus tag: Sfri_0687
Name: Sfri_0687
Funciton: L-serine dehydratase (EC 4.3.1.17)
Sfri_0688
SO0919
Serine transporter, putative
Sfri_0687
Sfri_0687
L-serine dehydratase (EC 4.3.1.17)
Position: -167
Score: 4
Sequence: AATGGTGATCATCGTAGCATTT
Locus tag: Sfri_0440
Name: hemC
Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Sfri_0439
Name: hemD
Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Sfri_0438
Name: hemX
Funciton: Homolog of E. coli HemX protein
Locus tag: Sfri_0437
Name: hemY
Funciton: HemY domain-containing protein
Sfri_0440
hemC
Porphobilinogen deaminase (EC 2.5.1.61)
Sfri_0439
hemD
Uroporphyrinogen-III synthase (EC 4.2.1.75)
Sfri_0438
hemX
Homolog of E. coli HemX protein
Sfri_0437
hemY
HemY domain-containing protein
Position: -169
Score: 4.9
Sequence: AAGTTTGATCATGATCACAATT
Locus tag: Sfri_3816
Name: SO4232
Funciton: long-chain fatty acid transport protein
Locus tag: Sfri_3815
Name: glpK
Funciton: glycerol kinase (EC 2.7.1.30)
Sfri_3816
SO4232
long-chain fatty acid transport protein
Sfri_3815
glpK
glycerol kinase (EC 2.7.1.30)
Position: -237
Score: 4.2
Sequence: CATTGTGATCAATGTCATATCA
Locus tag: Sfri_3510
Name: SO0572
Funciton: enoyl-CoA hydratase (EC 4.2.1.17)
Sfri_3510
SO0572
enoyl-CoA hydratase (EC 4.2.1.17)
Position: -186
Score: 4.5
Sequence: TAGCGTGAGTCGAGTCACAAAT
Locus tag: Sfri_0082
Name: moaA
Funciton: molybdenum cofactor biosynthesis protein MoaA
Locus tag: Sfri_0083
Name: moaC
Funciton: molybdenum cofactor biosynthesis protein MoaC
Locus tag: Sfri_0084
Name: moaD
Funciton: molybdenum cofactor biosynthesis protein MoaD
Locus tag: Sfri_0085
Name: moaE
Funciton: molybdenum cofactor biosynthesis protein MoaE
Locus tag: Sfri_0086
Name: modA
Funciton: molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1)
Locus tag: Sfri_0087
Name: modB
Funciton: molybdenum transport system permease protein ModB (TC 3.A.1.8.1)
Locus tag: Sfri_0088
Name: modC
Funciton: molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)
Sfri_0082
moaA
molybdenum cofactor biosynthesis protein MoaA
Sfri_0083
moaC
molybdenum cofactor biosynthesis protein MoaC
Sfri_0084
moaD
molybdenum cofactor biosynthesis protein MoaD
Sfri_0085
moaE
molybdenum cofactor biosynthesis protein MoaE
Sfri_0086
modA
molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1)
Sfri_0087
modB
molybdenum transport system permease protein ModB (TC 3.A.1.8.1)
Sfri_0088
modC
molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)
Position: -116
Score: 4.7
Sequence: ATTTTTGATATATATCACAGTC
Locus tag: Sfri_4042
Name: SO4743
Funciton: ferrichrome-iron receptor
Locus tag: Sfri_4041
Name: deoR
Funciton: transcriptional regulator of glmS gene, DeoR family
Locus tag: Sfri_4040
Name: glmS
Funciton: glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
Sfri_4042
SO4743
ferrichrome-iron receptor
Sfri_4041
deoR
transcriptional regulator of glmS gene, DeoR family
Sfri_4040
glmS
glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
Position: -149
Score: 5
Sequence: AAATGTGATGTTGTTCACATGT
Position: -4
Score: 4.1
Sequence: ATTCATGAGTTCAGTCACATTA
Locus tag: Sfri_2416
Name: null
Funciton: TonB-dependent receptor
Sfri_2416
TonB-dependent receptor
Position: -165
Score: 4.7
Sequence: TTATGTGATTATGATCGAAAAT
Locus tag: Sfri_1733
Name: fadD1
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Sfri_1733
fadD1
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -102
Score: 4.2
Sequence: AACAATGATTCACATCACAAAA
Locus tag: Sfri_1747
Name: sodB
Funciton: superoxide dismutase [Fe] (EC 1.15.1.1)
Sfri_1747
sodB
superoxide dismutase [Fe] (EC 1.15.1.1)
Position: -146
Score: 3.9
Sequence: CTTAGTGATCAAAATCAAATCA
Locus tag: Sfri_0937
Name: SO3683
Funciton: aldehyde dehydrogenase (EC 1.2.1.3); probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68)
Locus tag: Sfri_0936
Name: SO3684
Funciton: transcriptional regulator, TetR family
Sfri_0937
SO3683
aldehyde dehydrogenase (EC 1.2.1.3); probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68)
Sfri_0936
SO3684
transcriptional regulator, TetR family
Position: -195
Score: 3.9
Sequence: TATTGTGAAATCACACAGAAAA
Locus tag: Sfri_0493
Name: purH
Funciton: IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)
Locus tag: Sfri_0492
Name: purD
Funciton: Phosphoribosylamine--glycine ligase (EC 6.3.4.13)
Sfri_0493
purH
IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)
Sfri_0492
purD
Phosphoribosylamine--glycine ligase (EC 6.3.4.13)
Position: -251
Score: 4
Sequence: TATCTTGATGAGTTTAACCAAT
Locus tag: Sfri_0504
Name: SO3895
Funciton: HesA/MoeB/ThiF family protein related to EC-YgdL
Sfri_0504
SO3895
HesA/MoeB/ThiF family protein related to EC-YgdL
Position: -128
Score: 3.9
Sequence: TTTTTTGAGTTTGTGCACAACT
Locus tag: Sfri_2950
Name: SO1326
Funciton: COG1242: Predicted Fe-S oxidoreductase
Sfri_2950
SO1326
COG1242: Predicted Fe-S oxidoreductase
Position: -135
Score: 3.8
Sequence: TTGTGTGACCCGCTTCTAACTC
Position: -103
Score: 3.8
Sequence: ATAGGTGAACATTATCACGGTT
Locus tag: Sfri_0456
Name: fdrC
Funciton: fumarate reductase cytochrome b subunit
Locus tag: Sfri_0457
Name: frdA
Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Sfri_0458
Name: frdB
Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Sfri_0456
fdrC
fumarate reductase cytochrome b subunit
Sfri_0457
frdA
succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Sfri_0458
frdB
succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Position: -44
Score: 3.8
Sequence: AAATTTTATTTTTATCCAATTT
Locus tag: Sfri_1637
Name: cdd
Funciton: cytidine deaminase (EC 3.5.4.5)
Sfri_1637
cdd
cytidine deaminase (EC 3.5.4.5)
Position: -321
Score: 3.9
Sequence: CAAAGTGATCTTGATCAATGTT
Locus tag: Sfri_0258
Name: SO4606
Funciton: cytochrome c oxidase polypeptide II (EC 1.9.3.1)
Locus tag: Sfri_0257
Name: SO4607
Funciton: cytochrome c oxidase polypeptide I (EC 1.9.3.1)
Locus tag: Sfri_0256
Name: coxG
Funciton: cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
Locus tag: Sfri_0255
Name: SO4609
Funciton: cytochrome c oxidase polypeptide III (EC 1.9.3.1)
Sfri_0258
SO4606
cytochrome c oxidase polypeptide II (EC 1.9.3.1)
Sfri_0257
SO4607
cytochrome c oxidase polypeptide I (EC 1.9.3.1)
Sfri_0256
coxG
cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
Sfri_0255
SO4609
cytochrome c oxidase polypeptide III (EC 1.9.3.1)
Position: -64
Score: 4.5
Sequence: AAGTGTGAACTAGATCGAACTT
Locus tag: Sfri_2686
Name: putP
Funciton: proline/sodium symporter PutP (TC 2.A.21.2.1) @ propionate/sodium symporter
Sfri_2686
putP
proline/sodium symporter PutP (TC 2.A.21.2.1) @ propionate/sodium symporter
Position: -287
Score: 3.7
Sequence: CATAGTGATATTCGTTAAAATT
Position: -243
Score: 3.7
Sequence: CTTTATGCGTTGCATCACACTA
Locus tag: Sfri_3402
Name: SO4131
Funciton: nucleoside-binding outer membrane protein
Sfri_3402
SO4131
nucleoside-binding outer membrane protein
Position: -114
Score: 3.9
Sequence: TATTGTGACATATAGATAATAT
Locus tag: Sfri_2509
Name: swp_4930
Funciton: transcriptional regulator, LysR family
Sfri_2509
swp_4930
transcriptional regulator, LysR family
Position: -222
Score: 4.1
Sequence: AACTTTGATAGAGATCGTATTT
Position: -147
Score: 4.3
Sequence: ATTTGTGATGACGGTCGACTTT
Position: -38
Score: 4
Sequence: TTATTTAATCAGCTTCATAAAT
Locus tag: Sfri_3291
Name: sel1
Funciton: Sel1 domain protein repeat-containing protein precursor
Sfri_3291
sel1
Sel1 domain protein repeat-containing protein precursor
Position: -174
Score: 3.8
Sequence: TTTTGTTAACTTGATCAACATC
Position: -168
Score: 4.4
Sequence: TAACTTGATCAACATCATAAAT
Locus tag: Sfri_2103
Name: hyaA
Funciton: Quinone-reactive Ni/Fe-hydrogenase small chain precursor (EC 1.12.5.1)
Locus tag: Sfri_2104
Name: hyaB
Funciton: Quinone-reactive Ni/Fe-hydrogenase large chain (EC 1.12.5.1)
Locus tag: Sfri_2105
Name: hydC
Funciton: Ni,Fe-hydrogenase I cytochrome b subunit
Locus tag: Sfri_2106
Name: hyaD
Funciton: Hydrogenase maturation protease (EC 3.4.24.-)
Locus tag: Sfri_2107
Name: hyaE
Funciton: NiFe hydrogenase assembly chaperone, HyaE
Locus tag: Sfri_2108
Name: hyaF
Funciton: NiFe hydrogenase assembly protein, HypF
Sfri_2103
hyaA
Quinone-reactive Ni/Fe-hydrogenase small chain precursor (EC 1.12.5.1)
Sfri_2104
hyaB
Quinone-reactive Ni/Fe-hydrogenase large chain (EC 1.12.5.1)
Sfri_2105
hydC
Ni,Fe-hydrogenase I cytochrome b subunit
Sfri_2106
hyaD
Hydrogenase maturation protease (EC 3.4.24.-)
Sfri_2107
hyaE
NiFe hydrogenase assembly chaperone, HyaE
Sfri_2108
hyaF
NiFe hydrogenase assembly protein, HypF
Position: -122
Score: 4.6
Sequence: AAATGTGATGTAGCCCAAAAAG
Locus tag: Sfri_2156
Name: fumB
Funciton: Fumarate hydratase class I, aerobic (EC 4.2.1.2)
Sfri_2156
fumB
Fumarate hydratase class I, aerobic (EC 4.2.1.2)
Position: -232
Score: 3.9
Sequence: TCGCTTGATCAACCTCACAAAA
Position: -170
Score: 3.9
Sequence: TTTTGTGATCCAAATCAACAGC
Locus tag: Sfri_1334
Name: ompW
Funciton: outer membrane protein W precursor
Sfri_1334
ompW
outer membrane protein W precursor
Position: -135
Score: 5.1
Sequence: ATATGTGATCTAACTTACAATT
Locus tag: Sfri_2325
Name: hmgR
Funciton: Tyrosine degradation transcriptional regulator, LysR family
Sfri_2325
hmgR
Tyrosine degradation transcriptional regulator, LysR family
Position: -186
Score: 4.4
Sequence: TTTTTTGACTTAGCTCAAGTAT
Locus tag: Sfri_2010
Name: ccoN
Funciton: Cbb3-type cytochrome c oxidase, subunit I, CcoN
Locus tag: Sfri_2011
Name: ccoO
Funciton: Cbb3-type cytochrome c oxidase, subunit II, CcoO
Locus tag: Sfri_2012
Name: ccoQ
Funciton: Cbb3-type cytochrome c oxidase, subunit IV, CcoQ
Locus tag: Sfri_2013
Name: ccoP
Funciton: Cbb3-type cytochrome c oxidase, subunit III, CcoP
Sfri_2010
ccoN
Cbb3-type cytochrome c oxidase, subunit I, CcoN
Sfri_2011
ccoO
Cbb3-type cytochrome c oxidase, subunit II, CcoO
Sfri_2012
ccoQ
Cbb3-type cytochrome c oxidase, subunit IV, CcoQ
Sfri_2013
ccoP
Cbb3-type cytochrome c oxidase, subunit III, CcoP
Position: -74
Score: 4.5
Sequence: AACTGTGAGGGAGTTAACAAAA
Locus tag: Sfri_1328
Name: phhA
Funciton: Phenylalanine-4-hydroxylase (EC 1.14.16.1)
Locus tag: Sfri_1329
Name: phhB
Funciton: Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96)
Sfri_1328
phhA
Phenylalanine-4-hydroxylase (EC 1.14.16.1)
Sfri_1329
phhB
Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96)
Position: -298
Score: 4.1
Sequence: ACTTGTTATCCAGCTCTCACTT
Locus tag: Sfri_2472
Name: Spea_1673
Funciton: hypothetical protein
Sfri_2472
Spea_1673
hypothetical protein
Position: -116
Score: 4.5
Sequence: TAATGTGATGATAATTATATTA
Locus tag: Sfri_3674
Name: SO3553
Funciton: putative sulfate permease
Sfri_3674
SO3553
putative sulfate permease
Position: -198
Score: 4
Sequence: ATATGTCATACATTTAACGTAT
Locus tag: Sfri_3694
Name: shew_3181
Funciton: twin-arginine translocation pathway signal precursor
Locus tag: Sfri_3693
Name: shew_3182
Funciton: tetraheme cytochrome c
Sfri_3694
shew_3181
twin-arginine translocation pathway signal precursor
Sfri_3693
shew_3182
tetraheme cytochrome c
Position: -135
Score: 3.8
Sequence: TTGTGTGACCCGCTTCTAACTC
Position: -103
Score: 3.8
Sequence: ATAGGTGAACATTATCACGGTT
Locus tag: Sfri_0456
Name: frdC1
Funciton: Fumarate reductase cytochrome b subunit
Locus tag: Sfri_0457
Name: frdA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Sfri_0458
Name: frdB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Sfri_0456
frdC1
Fumarate reductase cytochrome b subunit
Sfri_0457
frdA
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Sfri_0458
frdB
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Position: -77
Score: 5
Sequence: AAGTGTGATGCAGATCACTATT
Locus tag: Sfri_2912
Name: yfiA-2
Funciton: Ribosome hibernation protein YfiA
Sfri_2912
yfiA-2
Ribosome hibernation protein YfiA
Position: -144
Score: 4
Sequence: TTTTGCGCGGCAGTTCACATTG
Position: -83
Score: 4.4
Sequence: TGACGTGATCTGTTTCATGTAA
Locus tag: Sfri_0813
Name: hemG
Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
Locus tag: Sfri_0814
Name: SO3719
Funciton: hypothetical protein
Sfri_0813
hemG
protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
Sfri_0814
SO3719
hypothetical protein
Position: -116
Score: 4.1
Sequence: AAATGTGATTTGGTACTTACTA
Locus tag: Sfri_1331
Name: fahA
Funciton: Fumarylacetoacetate hydrolase family protein
Locus tag: Sfri_1332
Name: maiA
Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2)
Sfri_1331
fahA
Fumarylacetoacetate hydrolase family protein
Sfri_1332
maiA
Maleylacetoacetate isomerase (EC 5.2.1.2)
Position: -131
Score: 3.8
Sequence: ATATGTGACATACGCATCATAA
Locus tag: Sfri_4035
Name: Sfri_4035
Funciton: Conserved hypothetical signal peptide protein
Locus tag: Sfri_4034
Name: Sfri_4034
Funciton: FMN-binding domain-containing protein
Locus tag: Sfri_4033
Name: Sfri_4033
Funciton: PepSY-associated TM helix domain-containing protein
Sfri_4035
Sfri_4035
Conserved hypothetical signal peptide protein
Sfri_4034
Sfri_4034
FMN-binding domain-containing protein
Sfri_4033
Sfri_4033
PepSY-associated TM helix domain-containing protein
Position: -116
Score: 4.8
Sequence: TTTTGTGATCGACTTCACGTCT
Locus tag: Sfri_2410
Name: null
Funciton: hypothetical protein
Sfri_2410
hypothetical protein
Position: -251
Score: 4.5
Sequence: ATATTTGACCATGTTCAAATAT
Locus tag: Sfri_3189
Name: swp_4060
Funciton: phospholipase A1 precursor (EC 3.1.1.32, EC 3.1.1.4); outer membrane phospholipase A
Sfri_3189
swp_4060
phospholipase A1 precursor (EC 3.1.1.32, EC 3.1.1.4); outer membrane phospholipase A
Position: -250
Score: 4
Sequence: TTACATGATATAGCGCACATCT
Position: -144
Score: 3.9
Sequence: TAATTTGAGATTGTTTATAAAT
Locus tag: Sfri_1504
Name: null
Funciton: cytochrome c3
Sfri_1504
cytochrome c3
Position: -181
Score: 3.8
Sequence: AACCGTGACATCAATCAAATCA
Locus tag: Sfri_1999
Name: psrA
Funciton: polysulfide reductase, subunit A
Locus tag: Sfri_2000
Name: psrB
Funciton: polysulfide reductase, subunit B
Locus tag: Sfri_2001
Name: psrC
Funciton: polysulfide reductase, subunit C
Sfri_1999
psrA
polysulfide reductase, subunit A
Sfri_2000
psrB
polysulfide reductase, subunit B
Sfri_2001
psrC
polysulfide reductase, subunit C
Position: -153
Score: 4.2
Sequence: TAGTTTGATTGCCACCACAATA
Locus tag: Sfri_2748
Name: etfB
Funciton: electron transfer flavoprotein, beta subunit
Locus tag: Sfri_2747
Name: etfA
Funciton: electron transfer flavoprotein, alpha subunit
Sfri_2748
etfB
electron transfer flavoprotein, beta subunit
Sfri_2747
etfA
electron transfer flavoprotein, alpha subunit
Position: -306
Score: 4.2
Sequence: AAGTGTGATGGATATCACTTGT
Locus tag: Sfri_2897
Name: SO3541
Funciton: sodium:alanine symporter family protein
Sfri_2897
SO3541
sodium:alanine symporter family protein
Position: -77
Score: 4
Sequence: TTTGTTGATGTTGATCAAATTC
Locus tag: Sfri_3610
Name: Sama_2599
Funciton: putative lipoprotein
Sfri_3610
Sama_2599
putative lipoprotein
Position: -145
Score: 4.5
Sequence: TTATTTGATCTAGGCCACACTA
Locus tag: Sfri_0503
Name: omp35
Funciton: outer membrane porin
Sfri_0503
omp35
outer membrane porin
Position: -325
Score: 4.5
Sequence: ATTTGTGAGCGATATCACGTCA
Position: -147
Score: 4.4
Sequence: TTATCTGCTTTGAATCACATTT
Locus tag: Sfri_3633
Name: SO0939
Funciton: split-soret diheme cytochrome c
Locus tag: Sfri_3634
Name: null
Funciton: hypothetical protein
Sfri_3633
SO0939
split-soret diheme cytochrome c
Sfri_3634
hypothetical protein
Position: -97
Score: 4
Sequence: AAATACGATCTCTATCAAAGTT
Locus tag: Sfri_3292
Name: crp
Funciton: Cyclic AMP receptor protein Crp
Sfri_3292
crp
Cyclic AMP receptor protein Crp
Position: -182
Score: 4.4
Sequence: AAACATGATCTGCTTAACAAAT
Locus tag: Sfri_0076
Name: SO4520
Funciton: Oxygen-independent coproporphyrinogen III oxidase, putative
Sfri_0076
SO4520
Oxygen-independent coproporphyrinogen III oxidase, putative
Position: -115
Score: 3.7
Sequence: TTAATTGATTACGATCAATTTA
Locus tag: Sfri_0616
Name: null
Funciton: hypothetical protein
Locus tag: Sfri_0615
Name: nrfB
Funciton: Cytochrome c-type protein NrfB precursor
Locus tag: Sfri_0614
Name: nrfC
Funciton: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Locus tag: Sfri_0613
Name: nrfD-2
Funciton: nitrite reductase, quinol dehydrogenase component, NrfD
Sfri_0616
hypothetical protein
Sfri_0615
nrfB
Cytochrome c-type protein NrfB precursor
Sfri_0614
nrfC
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Sfri_0613
nrfD-2
nitrite reductase, quinol dehydrogenase component, NrfD
Position: -141
Score: 4.5
Sequence: TTTTGTGAATTAAAGCAAATAA
Locus tag: Sfri_0964
Name: Spea_3089
Funciton: hypothetical protein
Sfri_0964
Spea_3089
hypothetical protein
Position: -155
Score: 4.5
Sequence: TTTTGTGATGTGAATCATTGTT
Locus tag: Sfri_1748
Name: ydhD
Funciton: Probable monothiol glutaredoxin ydhD
Sfri_1748
ydhD
Probable monothiol glutaredoxin ydhD
Position: -158
Score: 4.4
Sequence: TCTATTGATCTAAATCACAAAT
Locus tag: Sfri_2947
Name: cyaC
Funciton: Adenylate cyclase (EC 4.6.1.1)
Sfri_2947
cyaC
Adenylate cyclase (EC 4.6.1.1)
Position: -164
Score: 3.8
Sequence: TAGGCTGATCATCATCACACAA
Locus tag: Sfri_2637
Name: mtrC
Funciton: surface localized decaheme cytochrome c lipoprotein, MtrC
Locus tag: Sfri_2638
Name: mtrA
Funciton: periplasmic decaheme cytochrome c, MtrA
Locus tag: Sfri_2639
Name: mtrB
Funciton: outer membrane protein, MtrB
Sfri_2637
mtrC
surface localized decaheme cytochrome c lipoprotein, MtrC
Sfri_2638
mtrA
periplasmic decaheme cytochrome c, MtrA
Sfri_2639
mtrB
outer membrane protein, MtrB
Position: -139
Score: 3.7
Sequence: AGATTTGCGCCAGATCACGCTT
Locus tag: Sfri_0051
Name: SO4503
Funciton: formate dehydrogenase chain D (EC 1.2.1.2)
Sfri_0051
SO4503
formate dehydrogenase chain D (EC 1.2.1.2)
Position: -298
Score: 4.3
Sequence: TCTAGTGAGCCCCTTCACATTA
Position: -197
Score: 3.7
Sequence: AAACGTGACCTCAAACACGCAC
Locus tag: Sfri_2793
Name: lldP
Funciton: L-lactate permease
Locus tag: Sfri_2794
Name: dldD
Funciton: D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing
Sfri_2793
lldP
L-lactate permease
Sfri_2794
dldD
D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing
Position: -219
Score: 4.7
Sequence: TAACGTGATTTACATCAAGTTA
Position: -81
Score: 3.8
Sequence: CATTGTTATTGGAATAACATCT
Locus tag: Sfri_3404
Name: SO4134
Funciton: Protein of unknown function DUF465
Sfri_3404
SO4134
Protein of unknown function DUF465
Position: -112
Score: 4
Sequence: GGATATGATCTACTTCAAATTA
Locus tag: Sfri_3554
Name: SO4142
Funciton: cytochrome c family protein
Locus tag: Sfri_3555
Name: SO4143
Funciton: hypothetical protein
Locus tag: Sfri_3556
Name: SO4144
Funciton: octaheme tetrathionate reductase
Sfri_3554
SO4142
cytochrome c family protein
Sfri_3555
SO4143
hypothetical protein
Sfri_3556
SO4144
octaheme tetrathionate reductase
Position: -74
Score: 4.1
Sequence: ACGTGTGATGTAACTTACGTTA
Position: -19
Score: 3.7
Sequence: AAGTTTGAAAGGAATAACAATG
Locus tag: Sfri_2347
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Sfri_2346
Name: SO1927.1
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Sfri_2345
Name: sdhA
Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Sfri_2344
Name: sdhB
Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Sfri_2343
Name: sucA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Sfri_2342
Name: sucB
Funciton: dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: Sfri_2341
Name: sucC
Funciton: succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: Sfri_2340
Name: sucD
Funciton: succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Sfri_2347
sdhC
Succinate dehydrogenase cytochrome b-556 subunit
Sfri_2346
SO1927.1
Succinate dehydrogenase hydrophobic membrane anchor protein
Sfri_2345
sdhA
succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Sfri_2344
sdhB
succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Sfri_2343
sucA
2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Sfri_2342
sucB
dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Sfri_2341
sucC
succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Sfri_2340
sucD
succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
Position: -127
Score: 4.3
Sequence: CAGCGTGATTATGATCGCATTT
Locus tag: Sfri_0949
Name: nqrA-2
Funciton: Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-)
Locus tag: Sfri_0950
Name: nqrB-2
Funciton: Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-)
Locus tag: Sfri_0951
Name: nqrC-2
Funciton: Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-)
Locus tag: Sfri_0952
Name: nqrD-1
Funciton: Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-)
Locus tag: Sfri_0953
Name: nqrE-2
Funciton: Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-)
Locus tag: Sfri_0954
Name: nqrF-2
Funciton: Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-)
Sfri_0949
nqrA-2
Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-)
Sfri_0950
nqrB-2
Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-)
Sfri_0951
nqrC-2
Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-)
Sfri_0952
nqrD-1
Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-)
Sfri_0953
nqrE-2
Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-)
Sfri_0954
nqrF-2
Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-)
Position: -146
Score: 4.3
Sequence: AGTCGAGATCTAGCTCGCATTT
Locus tag: Sfri_0272
Name: cymA
Funciton: membrane anchored tetraheme cytochrome c, CymA
Sfri_0272
cymA
membrane anchored tetraheme cytochrome c, CymA
Position: -45
Score: 4.2
Sequence: AATTTAGATCTATGTCACAAAC
Locus tag: Sfri_3173
Name: mdh
Funciton: malate dehydrogenase (EC 1.1.1.37)
Sfri_3173
mdh
malate dehydrogenase (EC 1.1.1.37)
Position: -383
Score: 5.2
Sequence: AATAGTGATCTGCATCACACTT
Locus tag: Sfri_2911
Name: SO3421
Funciton: b-type cytochrome, putative
Sfri_2911
SO3421
b-type cytochrome, putative
Position: -67
Score: 3.8
Sequence: TCTTGTGAATGAGATCAATAAT
Locus tag: Sfri_1869
Name: fadE2
Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Sfri_1869
fadE2
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
Position: -167
Score: 4.6
Sequence: AAGTGTGATCTGATTCTAACTT
Locus tag: Sfri_2678
Name: SO3090
Funciton: MoxR-like ATPase in aerotolerance operon
Locus tag: Sfri_2679
Name: SO3091
Funciton: Conserved hypothetical protein
Locus tag: Sfri_2680
Name: null
Funciton: hypothetical protein
Locus tag: Sfri_2681
Name: SO3093
Funciton: von Willebrand factor type A domain protein
Locus tag: Sfri_2682
Name: SO3094
Funciton: TPR domain protein in aerotolerance operon
Locus tag: Sfri_2683
Name: SO3095
Funciton: hypothetical protein
Sfri_2678
SO3090
MoxR-like ATPase in aerotolerance operon
Sfri_2679
SO3091
Conserved hypothetical protein
Sfri_2680
hypothetical protein
Sfri_2681
SO3093
von Willebrand factor type A domain protein
Sfri_2682
SO3094
TPR domain protein in aerotolerance operon
Sfri_2683
SO3095
hypothetical protein
Position: -168
Score: 5.1
Sequence: TATTGTGATCGGTTTCAAACAA
Locus tag: Sfri_3775
Name: lpdA
Funciton: Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
Sfri_3775
lpdA
Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
Position: -233
Score: 4.5
Sequence: ACAAGTGATATCCATCACACTT
Position: -95
Score: 3.8
Sequence: AAATTAGATAAAGGCCACATTA
Locus tag: Sfri_2898
Name: phk
Funciton: Xylulose-5-phosphate phosphoketolase (EC 4.1.2.9)
Sfri_2898
phk
Xylulose-5-phosphate phosphoketolase (EC 4.1.2.9)
Position: -191
Score: 3.5
Sequence: TTAAATAATAAGTTTCAAATAT
Locus tag: Sfri_1454
Name: SO2757
Funciton: Histidine permease YuiF
Sfri_1454
SO2757
Histidine permease YuiF
Position: -159
Score: 4.7
Sequence: ATTTGTGACTCGACTCACGCTA
Locus tag: Sfri_0081
Name: etfD
Funciton: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Sfri_0081
etfD
Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
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