Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Crp in Shewanella baltica OS155

Properties
Regulator type: Transcription factor
TF locus tag: Sbal_0578
Regulator family: CRP
Regulation mode: repressor (activator)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Regulog: Crp - Shewanellaceae
Statistics of regulated genes:
- Genes 291
- Operons 153
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 2713 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -315
Score: 3.9
Sequence: AAGTATGAATCAGGTCACACTC
Locus tag: Sbal_3906
Name: yniC
Funciton: 2-deoxyglucose-6-phosphate hydrolase YniC
yniC
2-deoxyglucose-6-phosphate hydrolase YniC

Position: -136
Score: 3.9
Sequence: AAGTTAGAATCAGATCACACTT
Locus tag: Sbal_2761
Name: fadI
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16)
Locus tag: Sbal_2760
Name: fadJ
Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
fadI
3-ketoacyl-CoA thiolase (EC 2.3.1.16)
fadJ
Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)

Position: -149
Score: 4.7
Sequence: AATCGTGATATTGCTCACTATT
Locus tag: Sbal_1368
Name: icd
Funciton: Isocitrate dehydrogenase [NAD] (EC 1.1.1.41)
icd
Isocitrate dehydrogenase [NAD] (EC 1.1.1.41)

Position: -126
Score: 3.8
Sequence: CAGTGTGATCTTGTCAGCAAAA
Locus tag: Sbal_1038
Name: SO3552
Funciton: Von Willebrand factor type A domain protein
Locus tag: Sbal_1039
Name: SO3551
Funciton: RNA polymerase sigma-70 factor, ECF subfamily
Locus tag: Sbal_1040
Name: null
Funciton: hypothetical protein
SO3552
Von Willebrand factor type A domain protein
SO3551
RNA polymerase sigma-70 factor, ECF subfamily
hypothetical protein

Position: -244
Score: 5
Sequence: AAACGAGATCTAGATCACATTT
Locus tag: Sbal_1222
Name: SO3421
Funciton: b-type cytochrome, putative
SO3421
b-type cytochrome, putative

Position: -144
Score: 3.5
Sequence: TTTTTAGATTGAGATAACGGAT
Position: -88
Score: 4
Sequence: AATTGATAACAAGATCACACTA
Locus tag: Sbal_2615
Name: hmgA
Funciton: Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
hmgA
Homogentisate 1,2-dioxygenase (EC 1.13.11.5)

Position: -205
Score: 4.3
Sequence: ATCATTGACTTAGATCACATAA
Locus tag: Sbal_1859
Name: SO2586
Funciton: inactive homolog of metal-dependent proteases, putative molecular chaperone
Locus tag: Sbal_1860
Name: SO2585
Funciton: hypothetical protein
Locus tag: Sbal_1861
Name: SO2584
Funciton: Tlr1621 protein
SO2586
inactive homolog of metal-dependent proteases, putative molecular chaperone
SO2585
hypothetical protein
SO2584
Tlr1621 protein

Position: -93
Score: 4.8
Sequence: AAATGTGACCTAAAGCACATAC
Locus tag: Sbal_0417
Name: SO0439
Funciton: hypothetical protein
SO0439
hypothetical protein

Position: -159
Score: 3.8
Sequence: AATAGTGATCTTTCTCAGCATC
Locus tag: Sbal_3204
Name: SO1247
Funciton: hypothetical protein
SO1247
hypothetical protein

Position: -113
Score: 3.9
Sequence: AAACGTGCGCCATGTAACAAAA
Locus tag: Sbal_0542
Name: bfd
Funciton: bacterioferritin-associated ferredoxin
bfd
bacterioferritin-associated ferredoxin

Position: -73
Score: 3.8
Sequence: CTATTTGCGCGGGCTCACAAAA
Locus tag: Sbal_0351
Name: SO0355
Funciton: long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Locus tag: Sbal_0350
Name: SO0354
Funciton: inner membrane protein YrbG, predicted calcium/sodium:proton antiporter
SO0355
long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
SO0354
inner membrane protein YrbG, predicted calcium/sodium:proton antiporter

Position: -75
Score: 4
Sequence: TTGGGTTAGCAAGATCACATTA
Locus tag: Sbal_0833
Name: cadC
Funciton: transcriptional regulator-related protein
Locus tag: Sbal_0834
Name: SO0941
Funciton: hypothetical protein
cadC
transcriptional regulator-related protein
SO0941
hypothetical protein

Position: -136
Score: 3.7
Sequence: AAGTGTGACCTAAATCTATTTG
Locus tag: Sbal_3226
Name: deoA
Funciton: thymidine phosphorylase (EC 2.4.2.4)
Locus tag: Sbal_3225
Name: deoB
Funciton: phosphopentomutase (EC 5.4.2.7)
Locus tag: Sbal_3224
Name: deoD-2
Funciton: purine nucleoside phosphorylase (EC 2.4.2.1)
deoA
thymidine phosphorylase (EC 2.4.2.4)
deoB
phosphopentomutase (EC 5.4.2.7)
deoD-2
purine nucleoside phosphorylase (EC 2.4.2.1)

Position: -150
Score: 4
Sequence: AACTTTGATCCGGATCGACTAT
Locus tag: Sbal_3510
Name: napD
Funciton: periplasmic nitrate reductase component NapD
Locus tag: Sbal_3511
Name: napA
Funciton: periplasmic nitrate reductase precursor (EC 1.7.99.4)
Locus tag: Sbal_3512
Name: napB
Funciton: nitrate reductase cytochrome c550-type subunit
napD
periplasmic nitrate reductase component NapD
napA
periplasmic nitrate reductase precursor (EC 1.7.99.4)
napB
nitrate reductase cytochrome c550-type subunit

Position: -180
Score: 4.4
Sequence: TTGTGTGATTCTTAGCATAAAA
Locus tag: Sbal_3084
Name: SO1389
Funciton: ROK family protein, in a cluster with chitinase
SO1389
ROK family protein, in a cluster with chitinase

Position: -234
Score: 4.2
Sequence: TTTTATGCTAAGAATCACACAA
Locus tag: Sbal_3085
Name: SO1388
Funciton: Xaa-Pro aminopeptidase (EC 3.4.11.9)
SO1388
Xaa-Pro aminopeptidase (EC 3.4.11.9)

Position: -239
Score: 4.5
Sequence: AATAGTGATACAAACCACACTT
Locus tag: Sbal_3742
Name: SO4019
Funciton: DNA helicase
SO4019
DNA helicase

Position: -105
Score: 4.7
Sequence: TTAGGTGATGTGGGTCACGTTT
Locus tag: Sbal_1772
Name: yceI
Funciton: hypothetical protein
Locus tag: Sbal_1773
Name: SO2891
Funciton: type IIA topoisomerase, B subunit
yceI
hypothetical protein
SO2891
type IIA topoisomerase, B subunit

Position: -131
Score: 3.7
Sequence: CACTATGATCTGCTTCTAATTT
Position: -102
Score: 3.7
Sequence: TAATGAGCCCCGCTTCAAACTT
Locus tag: Sbal_0562
Name: petA
Funciton: ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2)
Locus tag: Sbal_0563
Name: petB
Funciton: ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2)
Locus tag: Sbal_0564
Name: petC
Funciton: ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit
Locus tag: Sbal_0565
Name: sspA
Funciton: stringent starvation protein A
Locus tag: Sbal_0566
Name: sspB
Funciton: stringent starvation protein B
petA
ubiquinol-cytochrome C reductase iron-sulfur subunit (EC 1.10.2.2)
petB
ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2)
petC
ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit
sspA
stringent starvation protein A
sspB
stringent starvation protein B

Position: -138
Score: 4.1
Sequence: TTCCTTGACTTAGCTCACACTT
Locus tag: Sbal_1436
Name: null
Funciton: hypothetical protein
hypothetical protein

Position: -212
Score: 3.9
Sequence: AAATGTGATCTGTGCCTAAATG
Locus tag: Sbal_2475
Name: icd
Funciton: isocitrate dehydrogenase [NADP] (EC 1.1.1.42); monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42)
icd
isocitrate dehydrogenase [NADP] (EC 1.1.1.42); monomeric isocitrate dehydrogenase [NADP] (EC 1.1.1.42)

Position: -160
Score: 4.2
Sequence: TTTCGTGACCTAGATTAGATAT
Locus tag: Sbal_4220
Name: SO0141
Funciton: sensory box/GGDEF family protein
Locus tag: Sbal_4221
Name: SO0141
Funciton: sensory box/GGDEF family protein
SO0141
sensory box/GGDEF family protein
SO0141
sensory box/GGDEF family protein

Position: -2
Score: 4.2
Sequence: TTATGTTATTAATGCCACAAAA
Locus tag: Sbal_2438
Name: ycbW
Funciton: probable membrane protein YcbW
ycbW
probable membrane protein YcbW

Position: -145
Score: 4.2
Sequence: AGTCGCGACTTTGTTCACAATT
Locus tag: Sbal_3228
Name: tsx
Funciton: nucleoside-specific channel-forming protein, Tsx
tsx
nucleoside-specific channel-forming protein, Tsx

Position: -301
Score: 4.3
Sequence: ATTCTTGATGTATATCAAGAAT
Position: -241
Score: 4
Sequence: TAACATGACGTAGATCTAATTT
Locus tag: Sbal_1890
Name: resA
Funciton: C-type cytochrome biogenesis protein ResA (thioredoxin)
Locus tag: Sbal_1891
Name: SO2101
Funciton: lipoprotein, putative
Locus tag: Sbal_1892
Name: null
Funciton: hypothetical protein
Locus tag: Sbal_1893
Name: apbE
Funciton: thiamin biosynthesis lipoprotein ApbE
Locus tag: Sbal_1894
Name: SO2104
Funciton: DNA-binding response regulator for Quinone-reactive Ni/Fe-hydrogenase
Locus tag: Sbal_1895
Name: SO2105
Funciton: Signal transduction histidine kinase for Quinone-reactive Ni/Fe-hydrogenase ## FIG-predicted
resA
C-type cytochrome biogenesis protein ResA (thioredoxin)
SO2101
lipoprotein, putative
hypothetical protein
apbE
thiamin biosynthesis lipoprotein ApbE
SO2104
DNA-binding response regulator for Quinone-reactive Ni/Fe-hydrogenase
SO2105
Signal transduction histidine kinase for Quinone-reactive Ni/Fe-hydrogenase ## FIG-predicted

Position: -78
Score: 5.5
Sequence: AAATGTGATTAAGTTCACAATT
Locus tag: Sbal_1230
Name: swp_3747
Funciton: hypothetical protein
swp_3747
hypothetical protein

Position: -136
Score: 4.2
Sequence: TTTGATGATCTAGTTCAAACTA
Locus tag: Sbal_4131
Name: null
Funciton: hypothetical protein
Locus tag: Sbal_4132
Name: SO4505
Funciton: hypothetical protein probably related to Formate dehydrogenase function
Locus tag: Sbal_4133
Name: SO4506
Funciton: iron-sulfur cluster-binding protein
Locus tag: Sbal_4134
Name: SO4507
Funciton: putative formate dehydrogenase-specific chaperone
Locus tag: Sbal_4135
Name: SO4508
Funciton: formate dehydrogenase subunit or accessory protein
Locus tag: Sbal_4136
Name: SO4509
Funciton: formate dehydrogenase-O, major subunit (EC 1.2.1.2)
Locus tag: Sbal_4137
Name: fdhB-1
Funciton: formate dehydrogenase-O, iron-sulfur subunit (EC 1.2.1.2); putative formate dehydrogenase iron-sulfur subunit (EC 1.2.1.2)
Locus tag: Sbal_4138
Name: SO4511
Funciton: formate dehydrogenase -O, gamma subunit (EC 1.2.1.2)
hypothetical protein
SO4505
hypothetical protein probably related to Formate dehydrogenase function
SO4506
iron-sulfur cluster-binding protein
SO4507
putative formate dehydrogenase-specific chaperone
SO4508
formate dehydrogenase subunit or accessory protein
SO4509
formate dehydrogenase-O, major subunit (EC 1.2.1.2)
fdhB-1
formate dehydrogenase-O, iron-sulfur subunit (EC 1.2.1.2); putative formate dehydrogenase iron-sulfur subunit (EC 1.2.1.2)
SO4511
formate dehydrogenase -O, gamma subunit (EC 1.2.1.2)

Position: -55
Score: 4.4
Sequence: TTACGTGACTTACAGCACGTAT
Locus tag: Sbal_0676
Name: sfcA
Funciton: NAD-dependent malic enzyme (EC 1.1.1.38)
sfcA
NAD-dependent malic enzyme (EC 1.1.1.38)

Position: -277
Score: 3.7
Sequence: TAAAGCGATATATGTAACAAAC
Locus tag: Sbal_0787
Name: SO3987
Funciton: hypothetical protein
SO3987
hypothetical protein

Position: -129
Score: 4
Sequence: AATCGTGATCGCTATGGCAAAA
Locus tag: Sbal_0142
Name: yhgI
Funciton: NfuA Fe-S protein maturation
yhgI
NfuA Fe-S protein maturation

Position: -146
Score: 3.8
Sequence: GAGTGCGAGCTAGCTCAAATTT
Locus tag: Sbal_3459
Name: SO3776
Funciton: hypothetical protein
SO3776
hypothetical protein

Position: -247
Score: 4
Sequence: CAGTGTGATCTAGATCGCGTGT
Locus tag: Sbal_1901
Name: rplY
Funciton: LSU ribosomal protein L25p
rplY
LSU ribosomal protein L25p

Position: -207
Score: 4.3
Sequence: AATGGTGATATTGGTCACTAAA
Locus tag: Sbal_0390
Name: SO4232
Funciton: long-chain fatty acid transport protein
Locus tag: Sbal_0391
Name: glpK
Funciton: glycerol kinase (EC 2.7.1.30)
SO4232
long-chain fatty acid transport protein
glpK
glycerol kinase (EC 2.7.1.30)

Position: -128
Score: 4.4
Sequence: TATAGTGTTGTCCGTCACATTT
Locus tag: Sbal_3458
Name: SO3774
Funciton: proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)
SO3774
proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)

Position: -142
Score: 4.1
Sequence: TTATGCGATATTGTTCTTAATT
Locus tag: Sbal_3502
Name: serA
Funciton: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
Locus tag: Sbal_3503
Name: SO0861
Funciton: folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress
serA
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95)
SO0861
folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress

Position: -149
Score: 4.3
Sequence: CTGTGTGATCAGGATCTCAGTT
Locus tag: Sbal_1598
Name: miaE
Funciton: tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-)
miaE
tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-)

Position: -149
Score: 4.4
Sequence: AAATGTGAACAACAACACCTTT
Position: -126
Score: 4.1
Sequence: CATTTTGATCTAGCGCAAACTT
Locus tag: Sbal_0794
Name: nrfA
Funciton: cytochrome c552 precursor (EC 1.7.2.2)
nrfA
cytochrome c552 precursor (EC 1.7.2.2)

Position: -76
Score: 3.7
Sequence: ATTTTTGAGCAATATCACGGCT
Locus tag: Sbal_3331
Name: null
Funciton: hypothetical protein
Locus tag: Sbal_3330
Name: SO3681
Funciton: universal stress protein family
Locus tag: Sbal_3329
Name: Shewana3_3248
Funciton: UspA domain-containing protein
hypothetical protein
SO3681
universal stress protein family
Shewana3_3248
UspA domain-containing protein

Position: -78
Score: 4
Sequence: ACACGCGATCTAGATCACACTG
Locus tag: Sbal_1900
Name: SO2111
Funciton: hypothetical protein
SO2111
hypothetical protein

Position: -57
Score: 3.8
Sequence: AAGTGTGATCTATGCCCTAAAT
Locus tag: Sbal_0427
Name: nadC
Funciton: di-and tricarboxylate transporter
nadC
di-and tricarboxylate transporter

Position: -196
Score: 4
Sequence: TTTTGTGAGCGACAGCCAATTT
Locus tag: Sbal_2269
Name: gloA
Funciton: lactoylglutathione lyase (EC 4.4.1.5)
gloA
lactoylglutathione lyase (EC 4.4.1.5)

Position: -196
Score: 4
Sequence: TTTTGTGAGCGACAGCCAATTT
Locus tag: Sbal_4555
Name: gloA
Funciton: lactoylglutathione lyase (EC 4.4.1.5)
gloA
lactoylglutathione lyase (EC 4.4.1.5)

Position: -189
Score: 4.2
Sequence: AGCCGTGATATTGCTCAAAAAT
Locus tag: Sbal_3332
Name: SO3683
Funciton: aldehyde dehydrogenase (EC 1.2.1.3); probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68)
Locus tag: Sbal_3333
Name: SO3684
Funciton: transcriptional regulator, TetR family
SO3683
aldehyde dehydrogenase (EC 1.2.1.3); probable coniferyl aldehyde dehydrogenase (EC 1.2.1.68)
SO3684
transcriptional regulator, TetR family

Position: -187
Score: 4
Sequence: TTAGGTGAGGACTGTCACAGAT
Locus tag: Sbal_0284
Name: moaA
Funciton: molybdenum cofactor biosynthesis protein MoaA
Locus tag: Sbal_0285
Name: moaC
Funciton: molybdenum cofactor biosynthesis protein MoaC
Locus tag: Sbal_0286
Name: moaD
Funciton: molybdenum cofactor biosynthesis protein MoaD
Locus tag: Sbal_0287
Name: moaE
Funciton: molybdenum cofactor biosynthesis protein MoaE
Locus tag: Sbal_0288
Name: modA
Funciton: molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1)
Locus tag: Sbal_0289
Name: modB
Funciton: molybdenum transport system permease protein ModB (TC 3.A.1.8.1)
Locus tag: Sbal_0290
Name: modC
Funciton: molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)
moaA
molybdenum cofactor biosynthesis protein MoaA
moaC
molybdenum cofactor biosynthesis protein MoaC
moaD
molybdenum cofactor biosynthesis protein MoaD
moaE
molybdenum cofactor biosynthesis protein MoaE
modA
molybdenum ABC transporter, substrate-binding protein (TC 3.A.1.8.1)
modB
molybdenum transport system permease protein ModB (TC 3.A.1.8.1)
modC
molybdenum transport ATP-binding protein ModC (TC 3.A.1.8.1)

Position: -143
Score: 4.5
Sequence: TTTTGTGATGTTAATCGACATA
Locus tag: Sbal_1631
Name: SO1821
Funciton: outer membrane porin, putative
SO1821
outer membrane porin, putative

Position: -96
Score: 4.1
Sequence: TTTTGTGCGCACCTTCATAAAT
Locus tag: Sbal_4067
Name: ygbA
Funciton: nitrosative stress induced protein
ygbA
nitrosative stress induced protein

Position: -202
Score: 4.3
Sequence: AAACGCGATCTTTATCACTATT
Locus tag: Sbal_2793
Name: SO3120
Funciton: oxidoreductase, Gfo/Idh/MocA family
SO3120
oxidoreductase, Gfo/Idh/MocA family

Position: -97
Score: 4.3
Sequence: ATGTGTGAAGCGTATCATGTAA
Locus tag: Sbal_3855
Name: SO4138
Funciton: hypothetical protein
SO4138
hypothetical protein

Position: -171
Score: 4.5
Sequence: AATAGTGATAAAGATCGCGTTT
Locus tag: Sbal_2792
Name: null
Funciton: hypothetical protein
hypothetical protein

Position: -212
Score: 4.4
Sequence: TTTTGTGATTAGAATCTCAACA
Locus tag: Sbal_0228
Name: ccmA
Funciton: ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
Locus tag: Sbal_0227
Name: ccmB
Funciton: ABC transporter involved in cytochrome c biogenesis, CcmB subunit
Locus tag: Sbal_0226
Name: ccmC
Funciton: cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Locus tag: Sbal_0225
Name: ccmD
Funciton: cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
Locus tag: Sbal_0224
Name: ccmE
Funciton: cytochrome c-type biogenesis protein CcmE, heme chaperone
ccmA
ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA
ccmB
ABC transporter involved in cytochrome c biogenesis, CcmB subunit
ccmC
cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
ccmD
cytochrome c-type biogenesis protein CcmD, interacts with CcmCE
ccmE
cytochrome c-type biogenesis protein CcmE, heme chaperone

Position: -228
Score: 3.9
Sequence: CAATATGATGTGGTTCCAATAA
Position: -128
Score: 4.5
Sequence: TGTTGAGATTCTAATCACAAAA
Locus tag: Sbal_0229
Name: scyA
Funciton: cytochrome c-type protein
scyA
cytochrome c-type protein

Position: -270
Score: 4.5
Sequence: ATGTGTGACATGGATCTAATTT
Locus tag: Sbal_0608
Name: argR
Funciton: arginine pathway regulatory protein ArgR, repressor of arg regulon
argR
arginine pathway regulatory protein ArgR, repressor of arg regulon

Position: -136
Score: 4.3
Sequence: AAATGCGAACGAGTTCACTTTT
Locus tag: Sbal_0124
Name: prlC
Funciton: Oligopeptidase A (EC 3.4.24.70)
prlC
Oligopeptidase A (EC 3.4.24.70)

Position: -75
Score: 4.2
Sequence: AGTCGTGATTGTGCTCACACCA
Locus tag: Sbal_2639
Name: SO2858
Funciton: hypothetical protein
Locus tag: Sbal_2638
Name: SO2857
Funciton: sodium solute symporter family protein
Locus tag: Sbal_2637
Name: SO2856
Funciton: predicted signal-transduction protein containing cAMP-binding and CBS domains
Locus tag: Sbal_2636
Name: SO2855
Funciton: DNA polymerase III epsilon subunit (EC 2.7.7.7)
Locus tag: Sbal_2635
Name: null
Funciton: hypothetical protein
SO2858
hypothetical protein
SO2857
sodium solute symporter family protein
SO2856
predicted signal-transduction protein containing cAMP-binding and CBS domains
SO2855
DNA polymerase III epsilon subunit (EC 2.7.7.7)
hypothetical protein

Position: -66
Score: 4.1
Sequence: GAGTGTGACCTGATTCATACTT
Locus tag: Sbal_3905
Name: acnB
Funciton: aconitate hydratase 2 (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99)
acnB
aconitate hydratase 2 (EC 4.2.1.3) @ 2-methylisocitrate dehydratase (EC 4.2.1.99)

Position: -95
Score: 4.5
Sequence: TTACATGATACGCTTCACACAT
Locus tag: Sbal_3856
Name: Sputcn32_0539
Funciton: mechanosensitive ion channel
Locus tag: Sbal_3857
Name: SO4139
Funciton: tetratricopeptide repeat family protein
Sputcn32_0539
mechanosensitive ion channel
SO4139
tetratricopeptide repeat family protein

Position: -316
Score: 4.4
Sequence: TTTTGTGAGACAGTTAAAACTA
Locus tag: Sbal_3400
Name: hemG
Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
Locus tag: Sbal_3399
Name: SO3719
Funciton: hypothetical protein
hemG
protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
SO3719
hypothetical protein

Position: -207
Score: 4.4
Sequence: TAGTGTGACTCGCGTCTCAATA
Locus tag: Sbal_2979
Name: cydA
Funciton: cytochrome d ubiquinol oxidase, subunit I, CydA
Locus tag: Sbal_2978
Name: cydB
Funciton: cytochrome d ubiquinol oxidase, subunit II, CydB
cydA
cytochrome d ubiquinol oxidase, subunit I, CydA
cydB
cytochrome d ubiquinol oxidase, subunit II, CydB

Position: -229
Score: 3.8
Sequence: GATTAGGATCTGGTTCACACTT
Position: -92
Score: 4.1
Sequence: TTCTGTGATCAAGTTAACCTTC
Locus tag: Sbal_3852
Name: udp
Funciton: Uridine phosphorylase (EC 2.4.2.3)
udp
Uridine phosphorylase (EC 2.4.2.3)

Position: -121
Score: 3.7
Sequence: AAGTTTGCGCTAGATCAAAATG
Position: -98
Score: 4.5
Sequence: AAAGGTGTTGTTGTTCACATTT
Locus tag: Sbal_0793
Name: narQ
Funciton: Nitrate/nitrite sensor protein (EC 2.7.3.-)
Locus tag: Sbal_0792
Name: narP
Funciton: Nitrate/nitrite response regulator protein
narQ
Nitrate/nitrite sensor protein (EC 2.7.3.-)
narP
Nitrate/nitrite response regulator protein

Position: -85
Score: 4.3
Sequence: TATAGTGATTTCAATCACAACC
Locus tag: Sbal_4032
Name: ilvC
Funciton: Ketol-acid reductoisomerase (EC 1.1.1.86)
ilvC
Ketol-acid reductoisomerase (EC 1.1.1.86)

Position: -145
Score: 4.7
Sequence: TTTTGTGATTGAGAGCACAACA
Locus tag: Sbal_0502
Name: SO0544
Funciton: sensory box histidine kinase
Locus tag: Sbal_0503
Name: SO0544.1
Funciton: response regulator receiver protein
SO0544
sensory box histidine kinase
SO0544.1
response regulator receiver protein

Position: -154
Score: 4.6
Sequence: AAAAGTGAACTCGTTCGCATTT
Locus tag: Sbal_0123
Name: null
Funciton: hypothetical protein
hypothetical protein

Position: -94
Score: 4.2
Sequence: ATCTGTGAATTAAGTCACACAG
Locus tag: Sbal_1679
Name: SO2806
Funciton: hypothetical protein
SO2806
hypothetical protein

Position: -201
Score: 4.8
Sequence: TGTTGTGCTCTCAATCACAAAA
Position: -88
Score: 3.9
Sequence: AATTTTACCCTGATTCACAAAA
Locus tag: Sbal_0501
Name: SO0543
Funciton: hypothetical protein
SO0543
hypothetical protein

Position: -128
Score: 4.5
Sequence: AATAGTGAGCAATATCACGATT
Locus tag: Sbal_1369
Name: SO1539
Funciton: Probable acylaminoacyl-peptidase (EC 3.4.19.1)
SO1539
Probable acylaminoacyl-peptidase (EC 3.4.19.1)

Position: -278
Score: 4.4
Sequence: TTTAGTGATTTAAGTCAACTAA
Locus tag: Sbal_0579
Name: sel1
Funciton: Sel1 domain protein repeat-containing protein precursor
sel1
Sel1 domain protein repeat-containing protein precursor

Position: -95
Score: 4.3
Sequence: AAATATTACTCCGATCACATTA
Locus tag: Sbal_0051
Name: cytcB
Funciton: diheme cytochrome c4
cytcB
diheme cytochrome c4

Position: -183
Score: 4.6
Sequence: AAATGTGATATTGGTCTTAAAT
Locus tag: Sbal_1738
Name: Swoo_2741
Funciton: Alkyl hydroperoxide reductase subunit C-like protein
Swoo_2741
Alkyl hydroperoxide reductase subunit C-like protein

Position: -102
Score: 3.8
Sequence: AGGTTAGATTTTAATCACACTT
Locus tag: Sbal_2770
Name: putP
Funciton: proline/sodium symporter PutP (TC 2.A.21.2.1) @ propionate/sodium symporter
putP
proline/sodium symporter PutP (TC 2.A.21.2.1) @ propionate/sodium symporter

Position: -193
Score: 4.4
Sequence: TTTGTTGATTGCGATCACAATT
Locus tag: Sbal_2305
Name: SO2535
Funciton: Predicted glutamine amidotransferase
SO2535
Predicted glutamine amidotransferase

Position: -95
Score: 4.6
Sequence: TAATGTGATCGGAGTAATATTT
Locus tag: Sbal_0052
Name: engB
Funciton: GTP-binding protein EngB
engB
GTP-binding protein EngB

Position: -276
Score: 5
Sequence: AAGCGTGATGTTGATCACGTTT
Locus tag: Sbal_1594
Name: feoA
Funciton: Ferrous iron transport protein A
Locus tag: Sbal_1595
Name: feoB
Funciton: Ferrous iron transport protein B
feoA
Ferrous iron transport protein A
feoB
Ferrous iron transport protein B

Position: -95
Score: 4.3
Sequence: AAATATTACTCCGATCACATTA
Locus tag: Sbal_0051
Name: cytcB
Funciton: Cytochrome c4
cytcB
Cytochrome c4

Position: -169
Score: 3.7
Sequence: TGCTGTGAGCTTTCTCTTAAAT
Position: -89
Score: 4.5
Sequence: ATATGTTATCCGAATCACTAAA
Locus tag: Sbal_2136
Name: Sbal_2136
Funciton: putative OMR family iron-siderophore receptor precursor
Sbal_2136
putative OMR family iron-siderophore receptor precursor

Position: -103
Score: 4.6
Sequence: AAATGTGATGTAGCCCAAAAAG
Locus tag: Sbal_1918
Name: fumB
Funciton: Fumarate hydratase class I, aerobic (EC 4.2.1.2)
fumB
Fumarate hydratase class I, aerobic (EC 4.2.1.2)

Position: -235
Score: 4.4
Sequence: TCATGTGATCAAGCTCGCGTTT
Position: -96
Score: 4.1
Sequence: AATTTGGATGTAGGGCACATTT
Locus tag: Sbal_1046
Name: phk
Funciton: Xylulose-5-phosphate phosphoketolase (EC 4.1.2.9)
phk
Xylulose-5-phosphate phosphoketolase (EC 4.1.2.9)

Position: -225
Score: 4.5
Sequence: TTAGGTGATACATCTCAAAAAA
Locus tag: Sbal_1051
Name: rpsT
Funciton: SSU ribosomal protein S20p
rpsT
SSU ribosomal protein S20p

Position: -227
Score: 4.2
Sequence: ATTTAAGACCAATATCACATTT
Locus tag: Sbal_1737
Name: SO2757
Funciton: Histidine permease YuiF
SO2757
Histidine permease YuiF

Position: -57
Score: 4.6
Sequence: AACTGTGATGCAGATCACTTAC
Locus tag: Sbal_4271
Name: Sbal_4271
Funciton: membrane protein, HPP family
Sbal_4271
membrane protein, HPP family

Position: -170
Score: 4.4
Sequence: ATCTGTGACAGTCCTCACCTAA
Locus tag: Sbal_0283
Name: etfD
Funciton: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
etfD
Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)

Position: -280
Score: 4.1
Sequence: TTTTGTGATCTAGATCCAATCC
Position: -139
Score: 4
Sequence: ATCAGCGATCTAGATCTCAATA
Locus tag: Sbal_0765
Name: SO0919
Funciton: Serine transporter, putative
SO0919
Serine transporter, putative

Position: -132
Score: 4.9
Sequence: AAATGTGAAGTCCGTCACACTT
Locus tag: Sbal_4000
Name: hemC
Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: Sbal_4001
Name: hemD
Funciton: Uroporphyrinogen-III synthase (EC 4.2.1.75)
Locus tag: Sbal_4002
Name: hemX
Funciton: Homolog of E. coli HemX protein
Locus tag: Sbal_4003
Name: hemY
Funciton: HemY domain-containing protein
hemC
Porphobilinogen deaminase (EC 2.5.1.61)
hemD
Uroporphyrinogen-III synthase (EC 4.2.1.75)
hemX
Homolog of E. coli HemX protein
hemY
HemY domain-containing protein

Position: -176
Score: 4.3
Sequence: ATAAGTGATCGATTCCACAGAA
Locus tag: Sbal_0385
Name: SO4240
Funciton: tetratricopeptide domain protein precursor
SO4240
tetratricopeptide domain protein precursor

Position: -128
Score: 4.3
Sequence: CAGCGTGATTGCGATCGCATTT
Locus tag: Sbal_0924
Name: nqrA-2
Funciton: Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-)
Locus tag: Sbal_0925
Name: nqrB-2
Funciton: Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-)
Locus tag: Sbal_0926
Name: nqrC-2
Funciton: Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-)
Locus tag: Sbal_0927
Name: nqrD-1
Funciton: Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-)
Locus tag: Sbal_0928
Name: nqrE-2
Funciton: Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-)
Locus tag: Sbal_0929
Name: nqrF-2
Funciton: Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-)
nqrA-2
Na(+)-translocating NADH-quinone reductase subunit A (EC 1.6.5.-)
nqrB-2
Na(+)-translocating NADH-quinone reductase subunit B (EC 1.6.5.-)
nqrC-2
Na(+)-translocating NADH-quinone reductase subunit C (EC 1.6.5.-)
nqrD-1
Na(+)-translocating NADH-quinone reductase subunit D (EC 1.6.5.-)
nqrE-2
Na(+)-translocating NADH-quinone reductase subunit E (EC 1.6.5.-)
nqrF-2
Na(+)-translocating NADH-quinone reductase subunit F (EC 1.6.5.-)

Position: -196
Score: 3.7
Sequence: CTCTGTGATCTTGGTCGTATTC
Locus tag: Sbal_3564
Name: SO3890
Funciton: methyl-accepting chemotaxis protein
SO3890
methyl-accepting chemotaxis protein

Position: -105
Score: 4.1
Sequence: TCAATTGATCTGGCTCACGTTT
Locus tag: Sbal_3936
Name: fdrC
Funciton: fumarate reductase cytochrome b subunit
Locus tag: Sbal_3935
Name: frdA
Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Sbal_3934
Name: frdB
Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
fdrC
fumarate reductase cytochrome b subunit
frdA
succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
frdB
succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)

Position: -49
Score: 4.6
Sequence: TTTTTTGAGATGTATCACCTAA
Locus tag: Sbal_1052
Name: mviN
Funciton: proposed peptidoglycan lipid II flippase MurJ
Locus tag: Sbal_1053
Name: ribF
Funciton: riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2)
Locus tag: Sbal_1054
Name: ileS
Funciton: isoleucyl-tRNA synthetase (EC 6.1.1.5)
Locus tag: Sbal_1055
Name: lspA
Funciton: lipoprotein signal peptidase (EC 3.4.23.36)
Locus tag: Sbal_1056
Name: fkbP-2
Funciton: FKBP-type peptidyl-prolyl cis-trans isomerase slpA (EC 5.2.1.8)
Locus tag: Sbal_1057
Name: lytB
Funciton: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
Locus tag: Sbal_1058
Name: pilV
Funciton: type IV fimbrial biogenesis protein PilV
Locus tag: Sbal_1059
Name: pilW
Funciton: type IV fimbrial biogenesis protein PilW
Locus tag: Sbal_1060
Name: pilX
Funciton: type IV fimbrial biogenesis protein PilX
Locus tag: Sbal_1061
Name: pilY1
Funciton: type IV fimbrial biogenesis protein PilY1
Locus tag: Sbal_1062
Name: pilE
Funciton: type IV pilus biogenesis protein PilE
mviN
proposed peptidoglycan lipid II flippase MurJ
ribF
riboflavin kinase (EC 2.7.1.26) / FMN adenylyltransferase (EC 2.7.7.2)
ileS
isoleucyl-tRNA synthetase (EC 6.1.1.5)
lspA
lipoprotein signal peptidase (EC 3.4.23.36)
fkbP-2
FKBP-type peptidyl-prolyl cis-trans isomerase slpA (EC 5.2.1.8)
lytB
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2)
pilV
type IV fimbrial biogenesis protein PilV
pilW
type IV fimbrial biogenesis protein PilW
pilX
type IV fimbrial biogenesis protein PilX
pilY1
type IV fimbrial biogenesis protein PilY1
pilE
type IV pilus biogenesis protein PilE

Position: -170
Score: 4.2
Sequence: TTTTGTTACATGGCGCACGTTT
Locus tag: Sbal_0543
Name: SO0584
Funciton: methyl-accepting chemotaxis protein
SO0584
methyl-accepting chemotaxis protein

Position: -228
Score: 4.1
Sequence: TTTTGTTAAGCAGATCATGTTT
Locus tag: Sbal_0220
Name: SO4519
Funciton: sodium-dependent transporter
SO4519
sodium-dependent transporter

Position: -156
Score: 5.1
Sequence: TTATGTGATGATGATCAAAATT
Locus tag: Sbal_1864
Name: fadD1
Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
fadD1
Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)

Position: -170
Score: 4.3
Sequence: TTTTGTGAGTCTGCTAGCAAAA
Locus tag: Sbal_3463
Name: cydD
Funciton: Transport ATP-binding protein CydD
Locus tag: Sbal_3462
Name: cydC
Funciton: Transport ATP-binding protein CydC
Locus tag: Sbal_3461
Name: cyaB
Funciton: adenylate cyclase CyaB, putative
cydD
Transport ATP-binding protein CydD
cydC
Transport ATP-binding protein CydC
cyaB
adenylate cyclase CyaB, putative

Position: -317
Score: 5.1
Sequence: AAGCGTGATCTGTGTCACATTT
Locus tag: Sbal_2044
Name: null
Funciton: TonB-dependent receptor
TonB-dependent receptor

Position: -173
Score: 4
Sequence: CAAATTTATCTTTATCACATTT
Position: -89
Score: 4.7
Sequence: AGTTGAGATATGTTTCACATTA
Locus tag: Sbal_0179
Name: Sbal_0179
Funciton: transcriptional regulator, LysR family
Locus tag: Sbal_0178
Name: menD
Funciton: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)
Locus tag: Sbal_0177
Name: SO4574
Funciton: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20)
Locus tag: Sbal_0176
Name: menC
Funciton: O-succinylbenzoate-CoA synthase (EC 4.2.1.-)
Locus tag: Sbal_0175
Name: SO4576
Funciton: O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)
Sbal_0179
transcriptional regulator, LysR family
menD
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase (EC 2.2.1.9)
SO4574
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase (EC 4.2.99.20)
menC
O-succinylbenzoate-CoA synthase (EC 4.2.1.-)
SO4576
O-succinylbenzoic acid--CoA ligase (EC 6.2.1.26)

Position: -154
Score: 4.2
Sequence: AATAATGATTTAATTCAAACTA
Locus tag: Sbal_3098
Name: Sbal_3098
Funciton: 83 kDa decaheme outer membrane cytochrome c
Sbal_3098
83 kDa decaheme outer membrane cytochrome c

Position: -293
Score: 3.9
Sequence: AATAGTGATTTTTATTGCAAAC
Position: -225
Score: 4.2
Sequence: TGATGTGAGCAATATCTCAATG
Position: -193
Score: 4.3
Sequence: TAATTTGAGGATGCGCACATTT
Locus tag: Sbal_1179
Name: SO1326
Funciton: COG1242: Predicted Fe-S oxidoreductase
SO1326
COG1242: Predicted Fe-S oxidoreductase

Position: -102
Score: 4.3
Sequence: TATTTTGACTCAAGTCAAAAAA
Locus tag: Sbal_0533
Name: SO0572
Funciton: enoyl-CoA hydratase (EC 4.2.1.17)
SO0572
enoyl-CoA hydratase (EC 4.2.1.17)

Position: -172
Score: 4.4
Sequence: AAACATGATCTGCTTAACAAAA
Locus tag: Sbal_0219
Name: SO4520
Funciton: Oxygen-independent coproporphyrinogen III oxidase, putative
SO4520
Oxygen-independent coproporphyrinogen III oxidase, putative

Position: -142
Score: 4.1
Sequence: AACTGGTATTTTGATCACATTT
Locus tag: Sbal_0571
Name: astC
Funciton: Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81)
Locus tag: Sbal_0572
Name: astA
Funciton: Arginine N-succinyltransferase (EC 2.3.1.109)
Locus tag: Sbal_0573
Name: astD
Funciton: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
Locus tag: Sbal_0574
Name: SO0620
Funciton: FIG008480: hypothetical protein
astC
Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) / Succinylornithine transaminase (EC 2.6.1.81)
astA
Arginine N-succinyltransferase (EC 2.3.1.109)
astD
Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71)
SO0620
FIG008480: hypothetical protein

Position: -317
Score: 4.4
Sequence: ATAAGTGATCTTGATCAATATT
Locus tag: Sbal_0154
Name: SO4606
Funciton: cytochrome c oxidase polypeptide II (EC 1.9.3.1)
Locus tag: Sbal_0153
Name: SO4607
Funciton: cytochrome c oxidase polypeptide I (EC 1.9.3.1)
Locus tag: Sbal_0152
Name: coxG
Funciton: cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
Locus tag: Sbal_0151
Name: SO4609
Funciton: cytochrome c oxidase polypeptide III (EC 1.9.3.1)
SO4606
cytochrome c oxidase polypeptide II (EC 1.9.3.1)
SO4607
cytochrome c oxidase polypeptide I (EC 1.9.3.1)
coxG
cytochrome oxidase biogenesis protein Cox11-CtaG, copper delivery to Cox1
SO4609
cytochrome c oxidase polypeptide III (EC 1.9.3.1)

Position: -111
Score: 4.7
Sequence: TATTGTGATCAGTATCAAACAC
Locus tag: Sbal_3911
Name: lpdA
Funciton: Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
lpdA
Dihydrolipoamide dehydrogenase (EC 1.8.1.4)

Position: -124
Score: 4.1
Sequence: TAAGGTGATCGTTCTCTAATAT
Locus tag: Sbal_1216
Name: hcp
Funciton: Hydroxylamine reductase (EC 1.7.-.-)
Locus tag: Sbal_1217
Name: hcr
Funciton: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
hcp
Hydroxylamine reductase (EC 1.7.-.-)
hcr
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1

Position: -198
Score: 4.2
Sequence: TTATGTGATTTTGACAACAACA
Position: -157
Score: 3.8
Sequence: AAATGTAAATTTTTGCATATAT
Locus tag: Sbal_3851
Name: SO4131
Funciton: nucleoside-binding outer membrane protein
SO4131
nucleoside-binding outer membrane protein

Position: -177
Score: 4.1
Sequence: TTATGTGAGCTAGCTTGTATTT
Locus tag: Sbal_4253
Name: hutC
Funciton: histidine utilization repressor
Locus tag: Sbal_4252
Name: hutU
Funciton: urocanate hydratase (EC 4.2.1.49)
Locus tag: Sbal_4251
Name: hutH
Funciton: histidine ammonia-lyase (EC 4.3.1.3)
hutC
histidine utilization repressor
hutU
urocanate hydratase (EC 4.2.1.49)
hutH
histidine ammonia-lyase (EC 4.3.1.3)

Position: -229
Score: 3.9
Sequence: TTAAGTGACCGATTTCATCCAA
Position: -167
Score: 3.7
Sequence: AAATTAGATCTACGTCATGTTA
Position: -107
Score: 4.2
Sequence: ATTCTTGATATACATCAAGAAT
Locus tag: Sbal_1889
Name: hyaA
Funciton: Quinone-reactive Ni/Fe-hydrogenase small chain precursor (EC 1.12.5.1)
Locus tag: Sbal_1888
Name: hyaB
Funciton: Quinone-reactive Ni/Fe-hydrogenase large chain (EC 1.12.5.1)
Locus tag: Sbal_1887
Name: hydC
Funciton: Ni,Fe-hydrogenase I cytochrome b subunit
Locus tag: Sbal_1886
Name: hyaD
Funciton: Hydrogenase maturation protease (EC 3.4.24.-)
Locus tag: Sbal_1885
Name: hyaE
Funciton: NiFe hydrogenase assembly chaperone, HyaE
Locus tag: Sbal_1884
Name: hyaF
Funciton: NiFe hydrogenase assembly protein, HypF
hyaA
Quinone-reactive Ni/Fe-hydrogenase small chain precursor (EC 1.12.5.1)
hyaB
Quinone-reactive Ni/Fe-hydrogenase large chain (EC 1.12.5.1)
hydC
Ni,Fe-hydrogenase I cytochrome b subunit
hyaD
Hydrogenase maturation protease (EC 3.4.24.-)
hyaE
NiFe hydrogenase assembly chaperone, HyaE
hyaF
NiFe hydrogenase assembly protein, HypF

Position: -195
Score: 4
Sequence: TATTGTGAAATCACGCAGAAAA
Locus tag: Sbal_0420
Name: purH
Funciton: IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)
Locus tag: Sbal_0419
Name: purD
Funciton: Phosphoribosylamine--glycine ligase (EC 6.3.4.13)
purH
IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3)
purD
Phosphoribosylamine--glycine ligase (EC 6.3.4.13)

Position: -97
Score: 5.2
Sequence: AAATGTGATCGTGTTCAAAAAA
Locus tag: Sbal_0180
Name: null
Funciton: hypothetical protein
Locus tag: Sbal_0181
Name: nrfB
Funciton: Cytochrome c-type protein NrfB precursor
Locus tag: Sbal_0182
Name: nrfC
Funciton: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
Locus tag: Sbal_0183
Name: nrfD-2
Funciton: nitrite reductase, quinol dehydrogenase component, NrfD
hypothetical protein
nrfB
Cytochrome c-type protein NrfB precursor
nrfC
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
nrfD-2
nitrite reductase, quinol dehydrogenase component, NrfD

Position: -187
Score: 4
Sequence: TAGTTTGAACTAGATCATCAAA
Locus tag: Sbal_4130
Name: SO4503
Funciton: formate dehydrogenase chain D (EC 1.2.1.2)
Locus tag: Sbal_4129
Name: SO4502
Funciton: conserved domain protein
SO4503
formate dehydrogenase chain D (EC 1.2.1.2)
SO4502
conserved domain protein

Position: -148
Score: 4.7
Sequence: TAGTGTGATCTTGTTATCAATT
Locus tag: Sbal_2614
Name: hmgR
Funciton: Tyrosine degradation transcriptional regulator, LysR family
hmgR
Tyrosine degradation transcriptional regulator, LysR family

Position: -158
Score: 4
Sequence: TTTCGTGATTCAGCTCCCATGT
Locus tag: Sbal_1490
Name: ompW
Funciton: outer membrane protein W precursor
ompW
outer membrane protein W precursor

Position: -210
Score: 3.7
Sequence: CTCTGTGCAGTGTATCACAAAG
Locus tag: Sbal_0021
Name: fadB
Funciton: enoyl-CoA hydratase (EC 4.2.1.17) / delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
Locus tag: Sbal_0020
Name: fadA
Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ acetyl-CoA acetyltransferase (EC 2.3.1.9)
fadB
enoyl-CoA hydratase (EC 4.2.1.17) / delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
fadA
3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ acetyl-CoA acetyltransferase (EC 2.3.1.9)

Position: -173
Score: 4.5
Sequence: TTTTTTGATATTGCTCAAGTAT
Locus tag: Sbal_2201
Name: ccoN
Funciton: Cbb3-type cytochrome c oxidase, subunit I, CcoN
Locus tag: Sbal_2202
Name: ccoO
Funciton: Cbb3-type cytochrome c oxidase, subunit II, CcoO
Locus tag: Sbal_2203
Name: ccoQ
Funciton: Cbb3-type cytochrome c oxidase, subunit IV, CcoQ
Locus tag: Sbal_2204
Name: ccoP
Funciton: Cbb3-type cytochrome c oxidase, subunit III, CcoP
ccoN
Cbb3-type cytochrome c oxidase, subunit I, CcoN
ccoO
Cbb3-type cytochrome c oxidase, subunit II, CcoO
ccoQ
Cbb3-type cytochrome c oxidase, subunit IV, CcoQ
ccoP
Cbb3-type cytochrome c oxidase, subunit III, CcoP

Position: -173
Score: 4.5
Sequence: TTTTTTGATATTGCTCAAGTAT
Locus tag: Sbal_4487
Name: ccoN
Funciton: Cbb3-type cytochrome c oxidase, subunit I, CcoN
Locus tag: Sbal_4488
Name: ccoO
Funciton: Cbb3-type cytochrome c oxidase, subunit II, CcoO
Locus tag: Sbal_4489
Name: ccoQ
Funciton: Cbb3-type cytochrome c oxidase, subunit IV, CcoQ
Locus tag: Sbal_4490
Name: ccoP
Funciton: Cbb3-type cytochrome c oxidase, subunit III, CcoP
ccoN
Cbb3-type cytochrome c oxidase, subunit I, CcoN
ccoO
Cbb3-type cytochrome c oxidase, subunit II, CcoO
ccoQ
Cbb3-type cytochrome c oxidase, subunit IV, CcoQ
ccoP
Cbb3-type cytochrome c oxidase, subunit III, CcoP

Position: -235
Score: 5
Sequence: AAATGTGATTTTGGTCACGCTA
Locus tag: Sbal_1487
Name: fahA
Funciton: Fumarylacetoacetate hydrolase family protein
Locus tag: Sbal_1488
Name: maiA
Funciton: Maleylacetoacetate isomerase (EC 5.2.1.2)
fahA
Fumarylacetoacetate hydrolase family protein
maiA
Maleylacetoacetate isomerase (EC 5.2.1.2)

Position: -139
Score: 3.8
Sequence: TGATATGAAATTGTTCGCAGTT
Position: -95
Score: 4.1
Sequence: TTTCGTTATATACTTAACAGAA
Locus tag: Sbal_1037
Name: SO3553
Funciton: putative sulfate permease
Locus tag: Sbal_1036
Name: purE
Funciton: phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
Locus tag: Sbal_1035
Name: purK
Funciton: phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
Locus tag: Sbal_1034
Name: SO3556
Funciton: cyclic nucleotide phosphodiesterase, putative
SO3553
putative sulfate permease
purE
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC 4.1.1.21)
purK
phosphoribosylaminoimidazole carboxylase ATPase subunit (EC 4.1.1.21)
SO3556
cyclic nucleotide phosphodiesterase, putative

Position: -145
Score: 4.3
Sequence: TTTTGTGATCTTCTTCTAAGAG
Position: -105
Score: 4.1
Sequence: TCAATTGATCTGGCTCACGTTT
Locus tag: Sbal_3937
Name: frdC1
Funciton: Fumarate reductase cytochrome b subunit
Locus tag: Sbal_3936
Name: fdrC2
Funciton: Fumarate reductase cytochrome b subunit
Locus tag: Sbal_3935
Name: frdA
Funciton: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Sbal_3934
Name: frdB
Funciton: Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
frdC1
Fumarate reductase cytochrome b subunit
fdrC2
Fumarate reductase cytochrome b subunit
frdA
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
frdB
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)

Position: -65
Score: 5
Sequence: TTTTGTGATCTAAATCACTGTA
Locus tag: Sbal_2577
Name: null
Funciton: hypothetical protein
hypothetical protein

Position: -77
Score: 5.2
Sequence: AAATGTGATCTAGATCTCGTTT
Locus tag: Sbal_1221
Name: yfiA-2
Funciton: Ribosome hibernation protein YfiA
yfiA-2
Ribosome hibernation protein YfiA

Position: -156
Score: 4.2
Sequence: AACTGAGATCCTGATCACACAG
Locus tag: Sbal_1597
Name: SO1787
Funciton: probable membrane protein YPO2362
SO1787
probable membrane protein YPO2362

Position: -136
Score: 4
Sequence: TTGGGTGATCTGCACCACAATC
Locus tag: Sbal_3674
Name: SO3967
Funciton: Molybdenum-binding periplasmic protein
SO3967
Molybdenum-binding periplasmic protein

Position: -304
Score: 3.8
Sequence: TTATGTGACAAAAATACCAATG
Position: -181
Score: 4.8
Sequence: AAACGTGATCAACATCACGCTT
Locus tag: Sbal_1593
Name: mtrD
Funciton: periplasmic decaheme cytochrome c, MtrD
Locus tag: Sbal_1592
Name: mtrE
Funciton: outer membrane protein, MtrE
Locus tag: Sbal_1591
Name: mtrF
Funciton: surface localized decaheme cytochrome c lipoprotein, MtrF
Locus tag: Sbal_1590
Name: omcA
Funciton: surface localized decaheme cytochrome c lipoprotein, OmcA
mtrD
periplasmic decaheme cytochrome c, MtrD
mtrE
outer membrane protein, MtrE
mtrF
surface localized decaheme cytochrome c lipoprotein, MtrF
omcA
surface localized decaheme cytochrome c lipoprotein, OmcA

Position: -202
Score: 4.1
Sequence: AATTGTGATGCTCATCATGGCT
Locus tag: Sbal_1478
Name: mtrF
Funciton: decaheme cytochrome c MtrF
mtrF
decaheme cytochrome c MtrF

Position: -220
Score: 3.9
Sequence: AAACGCGAGCTTGATCACATGA
Locus tag: Sbal_1047
Name: SO3541
Funciton: sodium:alanine symporter family protein
SO3541
sodium:alanine symporter family protein

Position: -168
Score: 4.4
Sequence: TTATGTGATCTAAGTCAATGAT
Locus tag: Sbal_1858
Name: hemB-1
Funciton: porphobilinogen synthase (EC 4.2.1.24)
hemB-1
porphobilinogen synthase (EC 4.2.1.24)

Position: -95
Score: 4.5
Sequence: TTACATGATACGCTTCACACAT
Locus tag: Sbal_3856
Name: kefA
Funciton: mechanosensitive ion channel
kefA
mechanosensitive ion channel

Position: -104
Score: 4.2
Sequence: TACAGCGATCTAGCTCAAATAT
Locus tag: Sbal_3384
Name: chaA
Funciton: calcium/proton antiporter
chaA
calcium/proton antiporter

Position: -67
Score: 3.6
Sequence: AAATGCGTTAAACCACACAAAA
Locus tag: Sbal_3570
Name: omp35
Funciton: outer membrane porin
omp35
outer membrane porin

Position: -174
Score: 3.7
Sequence: TTAGTTGACTTAAATCACTAAA
Locus tag: Sbal_0578
Name: crp
Funciton: Cyclic AMP receptor protein Crp
crp
Cyclic AMP receptor protein Crp

Position: -90
Score: 4.3
Sequence: TTAATTGACCTAGATCAAACTT
Locus tag: Sbal_3847
Name: null
Funciton: hypothetical protein
hypothetical protein

Position: -213
Score: 4.6
Sequence: TTATGTGAAGCAGATCGCCATT
Locus tag: Sbal_0942
Name: Spea_3089
Funciton: hypothetical protein
Spea_3089
hypothetical protein

Position: -156
Score: 4.5
Sequence: ATTTGTGATGTGAATCATTGTT
Locus tag: Sbal_1783
Name: ydhD
Funciton: Probable monothiol glutaredoxin ydhD
ydhD
Probable monothiol glutaredoxin ydhD

Position: -101
Score: 4.7
Sequence: TAGATTGATCCAGATCACAAAT
Locus tag: Sbal_1182
Name: cyaC
Funciton: Adenylate cyclase (EC 4.6.1.1)
cyaC
Adenylate cyclase (EC 4.6.1.1)

Position: -190
Score: 3.5
Sequence: TAGAAAGATCCAAGTCACACAT
Locus tag: Sbal_1589
Name: mtrC
Funciton: surface localized decaheme cytochrome c lipoprotein, MtrC
Locus tag: Sbal_1588
Name: mtrA
Funciton: periplasmic decaheme cytochrome c, MtrA
Locus tag: Sbal_1587
Name: mtrB
Funciton: outer membrane protein, MtrB
mtrC
surface localized decaheme cytochrome c lipoprotein, MtrC
mtrA
periplasmic decaheme cytochrome c, MtrA
mtrB
outer membrane protein, MtrB

Position: -321
Score: 5
Sequence: AAGTGTGATCTGGATCAAGTTT
Locus tag: Sbal_3568
Name: SO3895
Funciton: HesA/MoeB/ThiF family protein related to EC-YgdL
SO3895
HesA/MoeB/ThiF family protein related to EC-YgdL

Position: -78
Score: 5.5
Sequence: AAATGTGATTAAGTTCACAATT
Locus tag: Sbal_1230
Name: null
Funciton: hypothetical protein
Locus tag: Sbal_1231
Name: SO3412
Funciton: extracellular solute-binding proteins, family 3 protein
Locus tag: Sbal_1232
Name: SO3411
Funciton: tricorn protease homolog (EC 3.4.21.-)
hypothetical protein
SO3412
extracellular solute-binding proteins, family 3 protein
SO3411
tricorn protease homolog (EC 3.4.21.-)

Position: -206
Score: 3.8
Sequence: AAGTGTGAACCAGATCCTAATC
Position: -92
Score: 5
Sequence: AAGAGTGATCTAAGTCACATTT
Locus tag: Sbal_3853
Name: SO4134
Funciton: Protein of unknown function DUF465
SO4134
Protein of unknown function DUF465

Position: -66
Score: 3.8
Sequence: TGCCGTGATTCACATCCCAGTT
Locus tag: Sbal_2519
Name: sdhC
Funciton: Succinate dehydrogenase cytochrome b-556 subunit
Locus tag: Sbal_2518
Name: SO1927.1
Funciton: Succinate dehydrogenase hydrophobic membrane anchor protein
Locus tag: Sbal_2517
Name: sdhA
Funciton: succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Locus tag: Sbal_2516
Name: sdhB
Funciton: succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
Locus tag: Sbal_2515
Name: sucA
Funciton: 2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
Locus tag: Sbal_2514
Name: sucB
Funciton: dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
Locus tag: Sbal_2513
Name: sucC
Funciton: succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
Locus tag: Sbal_2512
Name: sucD
Funciton: succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)
sdhC
Succinate dehydrogenase cytochrome b-556 subunit
SO1927.1
Succinate dehydrogenase hydrophobic membrane anchor protein
sdhA
succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
sdhB
succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)
sucA
2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2)
sucB
dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61)
sucC
succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5)
sucD
succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5)

Position: -233
Score: 4.7
Sequence: AAAGGTGATCTATATCACTTAA
Locus tag: Sbal_1741
Name: SO2753
Funciton: prolyl endopeptidase (EC 3.4.21.26)
SO2753
prolyl endopeptidase (EC 3.4.21.26)

Position: -218
Score: 4.4
Sequence: TTTTGTGATCTCTTTTACTCAA
Locus tag: Sbal_0711
Name: ampG
Funciton: AmpG permease
ampG
AmpG permease

Position: -184
Score: 4.4
Sequence: TTACATGATGCAGCGCACATTT
Locus tag: Sbal_1793
Name: cctA
Funciton: cytochrome c3
cctA
cytochrome c3

Position: -263
Score: 4.2
Sequence: CTAAGTGATCACTGTCACAGAT
Position: -181
Score: 4
Sequence: CAAGATGATCTAGATCATATTA
Locus tag: Sbal_1354
Name: lldP
Funciton: L-lactate permease
Locus tag: Sbal_1353
Name: dldD
Funciton: D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing
lldP
L-lactate permease
dldD
D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing

Position: -157
Score: 3.8
Sequence: ATTCGTGAATAGACTCACTCTA
Position: -82
Score: 4.2
Sequence: AAACGCGAGCTAACTCGCATTT
Locus tag: Sbal_1694
Name: cdd
Funciton: cytidine deaminase (EC 3.5.4.5)
cdd
cytidine deaminase (EC 3.5.4.5)

Position: -159
Score: 4.2
Sequence: AAGTGTGGTTTGTATCACTATT
Locus tag: Sbal_3741
Name: SO4018
Funciton: hypothetical protein
SO4018
hypothetical protein

Position: -302
Score: 4.2
Sequence: CTTTGTGATACACTGCACAGAG
Locus tag: Sbal_0022
Name: pepQ
Funciton: Xaa-Pro dipeptidase PepQ (EC 3.4.13.9)
Locus tag: Sbal_0023
Name: SO0023
Funciton: FIG000605: protein co-occurring with transport systems (COG1739)
Locus tag: Sbal_0024
Name: trkH-1
Funciton: potassium uptake protein TrkH
Locus tag: Sbal_0025
Name: hemG
Funciton: protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)
pepQ
Xaa-Pro dipeptidase PepQ (EC 3.4.13.9)
SO0023
FIG000605: protein co-occurring with transport systems (COG1739)
trkH-1
potassium uptake protein TrkH
hemG
protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-)

Position: -90
Score: 4.3
Sequence: AACAATGATTCACATCACAAAT
Locus tag: Sbal_1782
Name: sodB
Funciton: superoxide dismutase [Fe] (EC 1.15.1.1)
sodB
superoxide dismutase [Fe] (EC 1.15.1.1)

Position: -72
Score: 4.8
Sequence: AATTGTGATCGCAATCAACAAA
Locus tag: Sbal_2306
Name: fadE2
Funciton: Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)
fadE2
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2)

Position: -46
Score: 4.3
Sequence: AAATTAGATCCATGTCACACAT
Locus tag: Sbal_0609
Name: mdh
Funciton: malate dehydrogenase (EC 1.1.1.37)
mdh
malate dehydrogenase (EC 1.1.1.37)

Position: -202
Score: 4.1
Sequence: AATTGTGATGCTCATCATGGCT
Locus tag: Sbal_1478
Name: mtrF
Funciton: decaheme cytochrome c MtrF
mtrF
decaheme cytochrome c MtrF

Position: -127
Score: 4.9
Sequence: AAACTTGATCCAGATCACACTT
Locus tag: Sbal_3569
Name: Shewana3_0734
Funciton: outer membrane porin, putative
Shewana3_0734
outer membrane porin, putative

Position: -222
Score: 4.2
Sequence: TTTTGTGATTGATTTATTATTA
Position: -144
Score: 4.3
Sequence: CTTCTTGATGGCGGTCACATTT
Locus tag: Sbal_1239
Name: yfiA-1
Funciton: ribosomal subunit interface protein
yfiA-1
ribosomal subunit interface protein

Position: -74
Score: 5.2
Sequence: AAATGTGATCTGTCTTACATTT
Locus tag: Sbal_3281
Name: lipB
Funciton: Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase
Locus tag: Sbal_3282
Name: lipA
Funciton: Lipoate synthase
lipB
Octanoate-[acyl-carrier-protein]-protein-N-octanoyltransferase
lipA
Lipoate synthase

Position: -75
Score: 4.7
Sequence: AAGTGTGAGGGAGTTAACAAAT
Locus tag: Sbal_1484
Name: phhA
Funciton: Phenylalanine-4-hydroxylase (EC 1.14.16.1)
Locus tag: Sbal_1485
Name: phhB
Funciton: Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96)
phhA
Phenylalanine-4-hydroxylase (EC 1.14.16.1)
phhB
Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96)

Position: -148
Score: 4.6
Sequence: AAGTGTGATCTGATTCTAACTT
Locus tag: Sbal_2762
Name: SO3090
Funciton: MoxR-like ATPase in aerotolerance operon
Locus tag: Sbal_2763
Name: SO3091
Funciton: Conserved hypothetical protein
Locus tag: Sbal_2764
Name: null
Funciton: hypothetical protein
Locus tag: Sbal_2765
Name: SO3093
Funciton: von Willebrand factor type A domain protein
Locus tag: Sbal_2766
Name: SO3094
Funciton: TPR domain protein in aerotolerance operon
Locus tag: Sbal_2767
Name: SO3095
Funciton: hypothetical protein
SO3090
MoxR-like ATPase in aerotolerance operon
SO3091
Conserved hypothetical protein
hypothetical protein
SO3093
von Willebrand factor type A domain protein
SO3094
TPR domain protein in aerotolerance operon
SO3095
hypothetical protein
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD