Regulon of TPP in Rhizobium etli CFN 42
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Rhizobiales |
| Under regulation: | |
| - Genes | 8 |
| - Operons | 3 |
Member of regulog collections
- By taxonomy - Rhizobiales
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -165
Score: 54 Sequence: CGATGAGAGACAGGG...
Locus tag: RHE_PE00337
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50) |
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thiM
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Hydroxyethylthiazole kinase (EC 2.7.1.50)
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Position: -273
Score: 58.4 Sequence: CGAAATAACAGGGGA...
Locus tag: RHE_CH03864
Name: thiX Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component
Locus tag: RHE_CH03865
Name: thiZ Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component
Locus tag: RHE_CH03866
Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component |
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thiX
|
Hydroxymethylpyrimidine ABC transporter, transmembrane component
|
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thiZ
|
Hydroxymethylpyrimidine ABC transporter, ATPase component
|
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thiY
|
Hydroxymethylpyrimidine ABC transporter, substrate-binding component
|
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Position: -228
Score: 66.5 Sequence: GACCATTCACCAGGG...
Locus tag: RHE_PB00082
Name: thiC Funciton: Thiamin biosynthesis protein ThiC
Locus tag: RHE_PB00081
Name: thiO Funciton: Glycine oxidase ThiO (EC 1.4.3.19)
Locus tag: RHE_PB00080
Name: thiG Funciton: Thiazole biosynthesis protein ThiG
Locus tag: RHE_PB00079
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
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thiC
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Thiamin biosynthesis protein ThiC
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thiO
|
Glycine oxidase ThiO (EC 1.4.3.19)
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thiG
|
Thiazole biosynthesis protein ThiG
|
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thiE
|
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |