Regulon of TPP in Rhizobium leguminosarum bv. viciae 3841
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Rhizobiales |
| Under regulation: | |
| - Genes | 8 |
| - Operons | 3 |
Member of regulog collections
- By taxonomy - Rhizobiales
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -103
Score: 57.8 Sequence: GCAAATAACAGGGGA...
Locus tag: RL4399
Name: ykoF Funciton: Additional substrate-binding component of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Locus tag: RL4400
Name: thiX Funciton: Hydroxymethylpyrimidine ABC transporter, transmembrane component
Locus tag: RL4401
Name: thiZ Funciton: Hydroxymethylpyrimidine ABC transporter, ATPase component
Locus tag: RL4402
Name: thiY Funciton: Hydroxymethylpyrimidine ABC transporter, substrate-binding component |
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ykoF
|
Additional substrate-binding component of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
|
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thiX
|
Hydroxymethylpyrimidine ABC transporter, transmembrane component
|
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thiZ
|
Hydroxymethylpyrimidine ABC transporter, ATPase component
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thiY
|
Hydroxymethylpyrimidine ABC transporter, substrate-binding component
|
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Position: -187
Score: 63.3 Sequence: TTGCATTCACCAGGG...
Locus tag: pRL100148
Name: thiC Funciton: Thiamin biosynthesis protein ThiC |
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thiC
|
Thiamin biosynthesis protein ThiC
|
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Position: -148
Score: 56.2 Sequence: CGATGAGAGACAGGG...
Locus tag: pRL110443
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: pRL110442
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
Locus tag: pRL110441
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
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thiM
|
Hydroxyethylthiazole kinase (EC 2.7.1.50)
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thiE
|
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
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thiD
|
Phosphomethylpyrimidine kinase (EC 2.7.4.7)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |