Regulon of TPP in Rhizobium sp. NGR234
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Rhizobiales |
| Under regulation: | |
| - Genes | 8 |
| - Operons | 3 |
Member of regulog collections
- By taxonomy - Rhizobiales
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -162
Score: 61.3 Sequence: CTGCTCTAACGGGGT...
Locus tag: NGR_c32610
Name: thiB Funciton: Thiamin ABC transporter, substrate-binding component
Locus tag: NGR_c32620
Name: thiP Funciton: Thiamin ABC transporter, transmembrane component
Locus tag: NGR_c32630
Name: thiQ Funciton: Thiamin ABC transporter, ATPase component |
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thiB
|
Thiamin ABC transporter, substrate-binding component
|
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thiP
|
Thiamin ABC transporter, transmembrane component
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thiQ
|
Thiamin ABC transporter, ATPase component
|
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Position: -210
Score: 73.1 Sequence: GTCCATTCACCAGGG...
Locus tag: NGR_b02930
Name: thiC Funciton: Thiamin biosynthesis protein ThiC
Locus tag: NGR_b02920
Name: thiOS Funciton: Glycine oxidase ThiO (EC 1.4.3.19) / thiamine biosynthesis protein ThiS
Locus tag: NGR_b02910
Name: thiG Funciton: Thiazole biosynthesis protein ThiG
Locus tag: NGR_b02900
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
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thiC
|
Thiamin biosynthesis protein ThiC
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thiOS
|
Glycine oxidase ThiO (EC 1.4.3.19) / thiamine biosynthesis protein ThiS
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thiG
|
Thiazole biosynthesis protein ThiG
|
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thiE
|
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
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Position: -162
Score: 68.3 Sequence: CCTCCATTCCGAGGG...
Locus tag: NGR_b18410
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7) |
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thiD
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Phosphomethylpyrimidine kinase (EC 2.7.4.7)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |