Regulon of Cobalamin in Xanthobacter autotrophicus Py2
| Regulator type: | RNA regulatory element |
| Name: | Cobalamin |
| RFAM: | RF00174 |
| Regulation mode: | |
| Biological process: | Cobalamin biosynthesis |
| Effector: | Adenosylcobalamin |
| Regulog: | Cobalamin - Rhizobiales |
| Under regulation: | |
| - Genes | 15 |
| - Operons | 3 |
Member of regulog collections
- By taxonomy - Rhizobiales
- By RNA motif - Cobalamin
- By effector - Adenosylcobalamin
- By pathway - Cobalamin biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -243
Score: 121.8 Sequence: ATAGTCGTCCCGTCG...
Locus tag: Xaut_3774
Name: cbtB Funciton: Putative cobalt transporter, subunit CbtB
Locus tag: Xaut_3775
Name: cbtA Funciton: Predicted cobalt transporter CbtA
Locus tag: Xaut_3776
Name: cobU Funciton: Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
Locus tag: Xaut_3777
Name: btuR Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Locus tag: Xaut_3778
Name: cbiP Funciton: Cobyric acid synthase |
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cbtB
|
Putative cobalt transporter, subunit CbtB
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cbtA
|
Predicted cobalt transporter CbtA
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cobU
|
Adenosylcobinamide-phosphate guanylyltransferase (EC 2.7.7.62)
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btuR
|
Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
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cbiP
|
Cobyric acid synthase
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Position: -280
Score: 113 Sequence: CTTTAGTGCCCCTGT...
Locus tag: Xaut_3288
Name: cfrX Funciton: Predicted metal-binding protein
Locus tag: Xaut_3287
Name: cobW Funciton: CobW GTPase involved in cobalt insertion for B12 biosynthesis
Locus tag: Xaut_3286
Name: cobN Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis
Locus tag: Xaut_3285
Name: cobG Funciton: Cobalamin biosynthesis protein CobG
Locus tag: Xaut_3284
Name: cbiC Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: Xaut_3283
Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: Xaut_3282
Name: cbiH Funciton: Cobalt-precorrin-3b C17-methyltransferase |
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cfrX
|
Predicted metal-binding protein
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cobW
|
CobW GTPase involved in cobalt insertion for B12 biosynthesis
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cobN
|
CobN component of cobalt chelatase involved in B12 biosynthesis
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cobG
|
Cobalamin biosynthesis protein CobG
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cbiC
|
Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
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cbiL
|
Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
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cbiH
|
Cobalt-precorrin-3b C17-methyltransferase
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Position: -264
Score: 89.9 Sequence: CTGCTGCAAAGGCAC...
Locus tag: Xaut_0420
Name: cbtC Funciton: Predicted cobalt transporter CbtC
Locus tag: Xaut_0421
Name: null Funciton: hypothetical protein
Locus tag: Xaut_0422
Name: btuB Funciton: Cobalamin specific TonB-dependent receptor |
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cbtC
|
Predicted cobalt transporter CbtC
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hypothetical protein
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btuB
|
Cobalamin specific TonB-dependent receptor
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |