Regulon of Cobalamin in Bradyrhizobium japonicum USDA 110
| Regulator type: | RNA regulatory element |
| Name: | Cobalamin |
| RFAM: | RF00174 |
| Regulation mode: | |
| Biological process: | Cobalamin biosynthesis |
| Effector: | Adenosylcobalamin |
| Regulog: | Cobalamin - Rhizobiales |
| Under regulation: | |
| - Genes | 15 |
| - Operons | 5 |
Member of regulog collections
- By taxonomy - Rhizobiales
- By RNA motif - Cobalamin
- By effector - Adenosylcobalamin
- By pathway - Cobalamin biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -302
Score: 108.3 Sequence: ATAATCCAAGTCGTC...
Locus tag: blr2068
Name: (EC 2.1.1.14) Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
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(EC 2.1.1.14)
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5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
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Position: -314
Score: 91.8 Sequence: AATGGTGGCCCGGCG...
Locus tag: blr3262
Name: cfrX Funciton: Predicted metal-binding protein
Locus tag: blr3261
Name: cobW Funciton: CobW GTPase involved in cobalt insertion for B12 biosynthesis
Locus tag: blr3263
Name: cobN Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis
Locus tag: blr3264
Name: cobG Funciton: Cobalamin biosynthesis protein CobG
Locus tag: blr3265
Name: cbiC Funciton: Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: blr3266
Name: cbiL Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: blr3267
Name: cbiH Funciton: Cobalt-precorrin-3b C17-methyltransferase |
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cfrX
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Predicted metal-binding protein
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cobW
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CobW GTPase involved in cobalt insertion for B12 biosynthesis
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cobN
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CobN component of cobalt chelatase involved in B12 biosynthesis
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cobG
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Cobalamin biosynthesis protein CobG
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cbiC
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Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
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cbiL
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Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
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cbiH
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Cobalt-precorrin-3b C17-methyltransferase
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Position: -256
Score: 99.5 Sequence: GCACACAGGACGGGC...
Locus tag: blr3274
Name: cbtC Funciton: Predicted cobalt transporter CbtC
Locus tag: blr3275
Name: cobF Funciton: Precorrin-6A synthase (EC 2.1.1.152)
Locus tag: blr3276
Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) |
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cbtC
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Predicted cobalt transporter CbtC
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cobF
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Precorrin-6A synthase (EC 2.1.1.152)
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cobT
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Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
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Position: -329
Score: 143.6 Sequence: TCGTAGATTGATCGG...
Locus tag: bll4766
Name: btuB Funciton: Outer membrane vitamin B12 receptor BtuB |
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btuB
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Outer membrane vitamin B12 receptor BtuB
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Position: -284
Score: 142.5 Sequence: TCCTAGATGCTCGCG...
Locus tag: blr3278
Name: btuB2 Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: blr3279
Name: btuB2 Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: blr3280
Name: btuN Funciton: Optional hypothetical component of the B12 transporter BtuN |
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btuB2
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Outer membrane vitamin B12 receptor BtuB
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btuB2
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Outer membrane vitamin B12 receptor BtuB
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btuN
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Optional hypothetical component of the B12 transporter BtuN
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |