Regulon of Cobalamin in Rhizobium sp. NGR234
| Regulator type: | RNA regulatory element |
| Name: | Cobalamin |
| RFAM: | RF00174 |
| Regulation mode: | |
| Biological process: | Cobalamin biosynthesis |
| Effector: | Adenosylcobalamin |
| Regulog: | Cobalamin - Rhizobiales |
| Under regulation: | |
| - Genes | 8 |
| - Operons | 4 |
Member of regulog collections
- By taxonomy - Rhizobiales
- By RNA motif - Cobalamin
- By effector - Adenosylcobalamin
- By pathway - Cobalamin biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -422
Score: 117 Sequence: CTAAGCAAGCCGACG...
Locus tag: NGR_b02510
Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: NGR_b02520
Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: NGR_b02530
Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD |
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btuF
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Vitamin B12 ABC transporter, B12-binding component BtuF
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btuC
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Vitamin B12 ABC transporter, permease component BtuC
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btuD
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Vitamin B12 ABC transporter, ATPase component BtuD
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Position: -257
Score: 78.6 Sequence: TGCCCATATGCGGCC...
Locus tag: NGR_c16920
Name: bluB Funciton: Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family |
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bluB
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Cobalamin biosynthesis protein BluB @ 5,6-dimethylbenzimidazole synthase, flavin destructase family
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Position: -314
Score: 56 Sequence: ATCATCGCTGATCGG...
Locus tag: NGR_c21910
Name: cbtB Funciton: Putative cobalt transporter, subunit CbtB
Locus tag: NGR_c21920
Name: cbtA Funciton: Predicted cobalt transporter CbtA |
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cbtB
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Putative cobalt transporter, subunit CbtB
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cbtA
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Predicted cobalt transporter CbtA
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Position: -327
Score: 109.2 Sequence: CTCATATGAACACGC...
Locus tag: NGR_c26320
Name: ardX Funciton: Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
Locus tag: NGR_c26310
Name: frdX Funciton: Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
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ardX
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Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
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frdX
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Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |