Regulon of Cobalamin in Chlorobium phaeobacteroides BS1
| Regulator type: | RNA regulatory element |
| Name: | Cobalamin |
| RFAM: | RF00174 |
| Regulation mode: | |
| Biological process: | Cobalamin biosynthesis |
| Effector: | Adenosylcobalamin |
| Regulog: | Cobalamin - Chlorobiales |
| Under regulation: | |
| - Genes | 11 |
| - Operons | 2 |
Member of regulog collections
- By taxonomy - Chlorobiales
- By RNA motif - Cobalamin
- By effector - Adenosylcobalamin
- By pathway - Cobalamin biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -359
Score: 101.8 Sequence: GATTTTTGATAAAGC...
Locus tag: Cphamn1_1191
Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: Cphamn1_1192
Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) |
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nrdD
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Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
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nrdG
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Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
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Position: -459
Score: 75.4 Sequence: TGTTCTTTCTTTTAT...
Locus tag: Cphamn1_1519
Name: btuB7 Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: Cphamn1_1518
Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Cphamn1_1517
Name: bluB Funciton: Cob(II)yrinic acid a,c-diamide reductase
Locus tag: Cphamn1_1516
Name: cbiP Funciton: Cobyric acid synthase
Locus tag: Cphamn1_1515
Name: cobD Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
Locus tag: Cphamn1_1514
Name: cbiB Funciton: Adenosylcobinamide-phosphate synthase
Locus tag: Cphamn1_1513
Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Cphamn1_1512
Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Locus tag: Cphamn1_1511
Name: pduO Funciton: Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17) |
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btuB7
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Outer membrane vitamin B12 receptor BtuB
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btuF
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Vitamin B12 ABC transporter, B12-binding component BtuF
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bluB
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Cob(II)yrinic acid a,c-diamide reductase
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cbiP
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Cobyric acid synthase
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cobD
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L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
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cbiB
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Adenosylcobinamide-phosphate synthase
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btuC
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Vitamin B12 ABC transporter, permease component BtuC
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btuD
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Vitamin B12 ABC transporter, ATPase component BtuD
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pduO
|
Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |