Regulon of Cobalamin in Pelodictyon phaeoclathratiforme BU-1

Properties
Regulator type:	RNA regulatory element
Name:	Cobalamin
RFAM:	RF00174
Regulation mode:
Biological process:	Cobalamin biosynthesis
Effector:	Adenosylcobalamin
Regulog:	Cobalamin - Chlorobiales
Under regulation:
- Genes	12
- Operons	2

Member of regulog collections

By taxonomy - Chlorobiales
By RNA motif - Cobalamin
By effector - Adenosylcobalamin
By pathway - Cobalamin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -512 Score: 75 Sequence: GTTCTTTCGTCGTAG... Locus tag: Ppha_1262 Name: btuB7 Funciton: Outer membrane vitamin B12 receptor BtuB Locus tag: Ppha_1263 Name: bluB Funciton: Cob(II)yrinic acid a,c-diamide reductase Locus tag: Ppha_1264 Name: cbiP Funciton: Cobyric acid synthase Locus tag: Ppha_1265 Name: cobD Funciton: L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81) Locus tag: Ppha_1266 Name: cbiB Funciton: Adenosylcobinamide-phosphate synthase Locus tag: Ppha_1267 Name: pduO Funciton: Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17) Locus tag: Ppha_1268 Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC Locus tag: Ppha_1269 Name: btuD Funciton: Vitamin B12 ABC transporter, ATPase component BtuD Locus tag: Ppha_1270 Name: PF01261 Funciton: Xylose isomerase domain protein TIM barrel
	Ppha_1262	btuB7	Outer membrane vitamin B12 receptor BtuB
	Ppha_1263	bluB	Cob(II)yrinic acid a,c-diamide reductase
	Ppha_1264	cbiP	Cobyric acid synthase
	Ppha_1265	cobD	L-threonine 3-O-phosphate decarboxylase (EC 4.1.1.81)
	Ppha_1266	cbiB	Adenosylcobinamide-phosphate synthase
	Ppha_1267	pduO	Cob(I)alamin adenosyltransferase PduO (EC 2.5.1.17)
	Ppha_1268	btuC	Vitamin B12 ABC transporter, permease component BtuC
	Ppha_1269	btuD	Vitamin B12 ABC transporter, ATPase component BtuD
	Ppha_1270	PF01261	Xylose isomerase domain protein TIM barrel
Position: -326 Score: 100.1 Sequence: TTTTTTACTGATGAA... Locus tag: Ppha_2623 Name: null Funciton: Hypothetical protein Locus tag: Ppha_2622 Name: nrdD Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) Locus tag: Ppha_2621 Name: nrdG Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
	Ppha_2623		Hypothetical protein
	Ppha_2622	nrdD	Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
	Ppha_2621	nrdG	Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD