Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Cobalamin in Chloroherpeton thalassium ATCC 35110

Properties
Regulator type: RNA regulatory element
Name: Cobalamin
RFAM: RF00174
Regulation mode:
Biological process: Cobalamin biosynthesis
Effector: Adenosylcobalamin
Regulog: Cobalamin - Chlorobiales
Under regulation:
- Genes 29
- Operons 6
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -405
Score: 89.8
Sequence: TTCTTTAGAAACTGT...
Locus tag: Ctha_2117
Name: btuB5
Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: Ctha_2118
Name: null
Funciton: Conserved hypothetical protein, putative surface protein
Locus tag: Ctha_2119
Name: btuR
Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Ctha_2117
btuB5
Outer membrane vitamin B12 receptor BtuB
Ctha_2118
Conserved hypothetical protein, putative surface protein
Ctha_2119
btuR
Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Position: -464
Score: 80.6
Sequence: AATTTTGAGTTTTAT...
Locus tag: Ctha_2210
Name: btuB3
Funciton: Vitamin B12 transporter BtuB3
Ctha_2210
btuB3
Vitamin B12 transporter BtuB3
Position: -415
Score: 79.4
Sequence: ATATCTACGCTTATT...
Locus tag: Ctha_1003
Name: btuB6
Funciton: Outer membrane vitamin B12 receptor BtuB
Locus tag: Ctha_1004
Name: btuN
Funciton: Optional hypothetical component of the B12 transporter BtuN
Ctha_1003
btuB6
Outer membrane vitamin B12 receptor BtuB
Ctha_1004
btuN
Optional hypothetical component of the B12 transporter BtuN
Position: -133
Score: 18.6
Sequence: GGAAGTCCTGTGAGA...
Locus tag: Ctha_0685
Name: nrdD
Funciton: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Locus tag: Ctha_0686
Name: nrdG
Funciton: Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
Ctha_0685
nrdD
Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Ctha_0686
nrdG
Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4)
Position: -227
Score: 93.6
Sequence: GTATAATTTCCCTTC...
Locus tag: Ctha_2234
Name: btuF
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Ctha_2233
Name: cbiZ
Funciton: Adenosylcobinamide amidohydrolase (EC 3.5.1.90)
Locus tag: Ctha_2232
Name: PF00795
Funciton: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein
Locus tag: Ctha_2231
Name: nfo
Funciton: Endonuclease IV (EC 3.1.21.2)
Locus tag: Ctha_2230
Name: cbiM
Funciton: Substrate-specific component CbiM of cobalt ECF transporter
Locus tag: Ctha_2229
Name: cbiN
Funciton: Additional substrate-specific component CbiN of cobalt ECF transporter
Locus tag: Ctha_2228
Name: cbiQ
Funciton: Transmembrane component CbiQ of energizing module of cobalt ECF transporter
Locus tag: Ctha_2227
Name: cbiO
Funciton: ATPase component CbiO of energizing module of cobalt ECF transporter
Locus tag: Ctha_2226
Name: yeeZ
Funciton: NAD-dependent epimerase/dehydratase
Locus tag: Ctha_2225
Name: bluB
Funciton: Cob(II)yrinic acid a,c-diamide reductase
Locus tag: Ctha_2224
Name: cobA
Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Locus tag: Ctha_2223
Name: cbiX
Funciton: Sirohydrochlorin cobaltochelatase (EC 4.99.1.3)
Locus tag: Ctha_2222
Name: null
Funciton: Hypothetical protein
Locus tag: Ctha_2221
Name: cbiL
Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: Ctha_2220
Name: cbiHC
Funciton: Cobalt-precorrin-3b C17-methyltransferase / Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: Ctha_2219
Name: null
Funciton: Prevent-host-death family protein
Locus tag: Ctha_2218
Name: null
Funciton: Conserved hypothetical protein
Locus tag: Ctha_2217
Name: cbiET
Funciton: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
Ctha_2234
btuF
Vitamin B12 ABC transporter, B12-binding component BtuF
Ctha_2233
cbiZ
Adenosylcobinamide amidohydrolase (EC 3.5.1.90)
Ctha_2232
PF00795
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein
Ctha_2231
nfo
Endonuclease IV (EC 3.1.21.2)
Ctha_2230
cbiM
Substrate-specific component CbiM of cobalt ECF transporter
Ctha_2229
cbiN
Additional substrate-specific component CbiN of cobalt ECF transporter
Ctha_2228
cbiQ
Transmembrane component CbiQ of energizing module of cobalt ECF transporter
Ctha_2227
cbiO
ATPase component CbiO of energizing module of cobalt ECF transporter
Ctha_2226
yeeZ
NAD-dependent epimerase/dehydratase
Ctha_2225
bluB
Cob(II)yrinic acid a,c-diamide reductase
Ctha_2224
cobA
Uroporphyrinogen-III methyltransferase (EC 2.1.1.107)
Ctha_2223
cbiX
Sirohydrochlorin cobaltochelatase (EC 4.99.1.3)
Ctha_2222
Hypothetical protein
Ctha_2221
cbiL
Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Ctha_2220
cbiHC
Cobalt-precorrin-3b C17-methyltransferase / Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Ctha_2219
Prevent-host-death family protein
Ctha_2218
Conserved hypothetical protein
Ctha_2217
cbiET
Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
Position: -235
Score: 94.4
Sequence: AAATAACGGCCTGTT...
Locus tag: Ctha_2451
Name: btuF
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Ctha_2450
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Ctha_2449
Name: btuD
Funciton: Vitamin B12 ABC transporter, ATPase component BtuD
Ctha_2451
btuF
Vitamin B12 ABC transporter, B12-binding component BtuF
Ctha_2450
btuC
Vitamin B12 ABC transporter, permease component BtuC
Ctha_2449
btuD
Vitamin B12 ABC transporter, ATPase component BtuD
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