Regulon of CcpA in Streptococcus thermophilus CNRZ1066
| Regulator type: | Transcription factor |
| TF locus tag: | str0630 |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Global catabolite repression |
| Effector: | Fructose-1,6-bisphosphate; HPr, phosphocarrier protein |
| Regulog: | CcpA - Streptococcaceae |
| Statistics of regulated genes: | |
| - Genes | 76 |
| - Operons | 35 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Streptococcaceae
- By trascription factor - CcpA
- By TF family - LacI
- By effector - Fructose-1,6-bisphosphate
- By effector - HPr, phosphocarrier protein
- By pathway - Global catabolite repression
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -134
Score: 3.8 Sequence: TATTCATCGCTTACAA
Locus tag: str0629
Name: pepQ Funciton: Xaa-Pro dipeptidase (EC 3.4.13.9) |
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pepQ
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Xaa-Pro dipeptidase (EC 3.4.13.9)
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Position: -96
Score: 4.2 Sequence: ATGTAAGGCTTTTCAT
Locus tag: str1051
Name: acoA Funciton: Acetoin dehydrogenase E1 component alpha-subunit (EC 1.2.4.-)
Locus tag: str1050
Name: acoB Funciton: Acetoin dehydrogenase E1 component beta-subunit (EC 1.2.4.-) |
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acoA
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Acetoin dehydrogenase E1 component alpha-subunit (EC 1.2.4.-)
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acoB
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Acetoin dehydrogenase E1 component beta-subunit (EC 1.2.4.-)
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Position: -89
Score: 4.3 Sequence: TGAAAAACGTTTACAA
Locus tag: str0729
Name: typA Funciton: GTP-binding protein TypA/BipA |
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typA
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GTP-binding protein TypA/BipA
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Position: -67
Score: 4.1 Sequence: TTGAAAACGGTTTTAC
Locus tag: str1197
Name: pfk Funciton: 6-phosphofructokinase (EC 2.7.1.11)
Locus tag: str1196
Name: pyk Funciton: Pyruvate kinase (EC 2.7.1.40) |
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pfk
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6-phosphofructokinase (EC 2.7.1.11)
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pyk
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Pyruvate kinase (EC 2.7.1.40)
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Position: -139
Score: 4.5 Sequence: ATGATAACGCTTTATA
Locus tag: str0333
Name: manL Funciton: PTS system, mannose-specific IIAB components
Locus tag: str0332
Name: manM Funciton: PTS system, mannose-specific IIC component (EC 2.7.1.69)
Locus tag: str0331
Name: manN Funciton: PTS system, mannose-specific IID component (EC 2.7.1.69)
Locus tag: str0330
Name: manO Funciton: Putative regulator of the mannose operon, ManO |
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manL
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PTS system, mannose-specific IIAB components
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manM
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PTS system, mannose-specific IIC component (EC 2.7.1.69)
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manN
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PTS system, mannose-specific IID component (EC 2.7.1.69)
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manO
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Putative regulator of the mannose operon, ManO
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Position: 0
Score: 4.9 Sequence: TTGAAAGCGTTTTATA
Locus tag: str1857
Name: ackA Funciton: Acetate kinase (EC 2.7.2.1) |
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ackA
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Acetate kinase (EC 2.7.2.1)
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Position: -45
Score: 4.3 Sequence: TTGATAAGGCTTACAT
Locus tag: str0799
Name: coaA Funciton: Pantothenate kinase (EC 2.7.1.33) |
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coaA
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Pantothenate kinase (EC 2.7.1.33)
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Position: -181
Score: 4 Sequence: GTGTAATCGATTTCTA
Locus tag: str1067
Name: bglH Funciton: 6-phospho-beta-glucosidase (EC 3.2.1.86)
Locus tag: str1066
Name: bglH Funciton: 6-phospho-beta-glucosidase (EC 3.2.1.86)
Locus tag: str1065
Name: bglH Funciton: 6-phospho-beta-glucosidase (EC 3.2.1.86)
Locus tag: str1064
Name: bglH Funciton: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
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bglH
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6-phospho-beta-glucosidase (EC 3.2.1.86)
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bglH
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6-phospho-beta-glucosidase (EC 3.2.1.86)
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bglH
|
6-phospho-beta-glucosidase (EC 3.2.1.86)
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bglH
|
6-phospho-beta-glucosidase (EC 3.2.1.86)
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Position: -58
Score: 4 Sequence: CTATAAAGGTTTTCAA
Locus tag: str0727
Name: yvaA Funciton: Bacterial conserved protein of unknown function (DUF910) family
Locus tag: str0728
Name: glcK Funciton: Glucokinase (EC 2.7.1.2) |
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yvaA
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Bacterial conserved protein of unknown function (DUF910) family
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glcK
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Glucokinase (EC 2.7.1.2)
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Position: -115
Score: 4.5 Sequence: TTTAAAACGCTTTCAC
Locus tag: str1280
Name: ldh Funciton: L-lactate dehydrogenase (EC 1.1.1.27) |
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ldh
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L-lactate dehydrogenase (EC 1.1.1.27)
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Position: -180
Score: 4.5 Sequence: AAGAAAACGATTACAG
Locus tag: str1631
Name: ascB Funciton: 6-phospho-beta-glucosidase (EC 3.2.1.86)
Locus tag: str1630
Name: ascB Funciton: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
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ascB
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6-phospho-beta-glucosidase (EC 3.2.1.86)
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ascB
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6-phospho-beta-glucosidase (EC 3.2.1.86)
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Position: -82
Score: 3.9 Sequence: ATACAATCGGTTACAA
Locus tag: str0364
Name: acuB Funciton: Acetoin utilization protein AcuB
Locus tag: str0365
Name: acuB Funciton: Acetoin utilization protein AcuB |
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acuB
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Acetoin utilization protein AcuB
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acuB
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Acetoin utilization protein AcuB
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Position: -62
Score: 4.1 Sequence: AAAATAGCGTTTTTAA
Locus tag: str0112
Name: SP_0238 Funciton: Predicted transcriptional regulator, ACT family
Locus tag: str0113
Name: SP_0238 Funciton: Glycerol-3-phosphate dehydrogenase homolog (EC 1.1.1.94) |
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SP_0238
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Predicted transcriptional regulator, ACT family
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SP_0238
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Glycerol-3-phosphate dehydrogenase homolog (EC 1.1.1.94)
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Position: -106
Score: 4.6 Sequence: ATCAAAACGCTTACAA
Position: -44
Score: 4.2 Sequence: ATGTAAACGGGTTCAA
Locus tag: str1899
Name: fbaA Funciton: Fructose-bisphosphate aldolase class II (EC 4.1.2.13) |
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fbaA
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Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
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Position: -72
Score: 4.4 Sequence: AAGAAAACGCTTTACA
Position: -21
Score: 3.9 Sequence: ATGCAAACGCTCGCAT
Locus tag: str0189
Name: ptsG Funciton: PTS system glucose-specific EIICBA component (EC 2.7.1.69)
Locus tag: str0190
Name: ptsG Funciton: PTS system glucose-specific EIICBA component (EC 2.7.1.69)
Locus tag: str0191
Name: ptsG Funciton: PTS system glucose-specific EIICBA component (EC 2.7.1.69)
Locus tag: str0192
Name: ptsG Funciton: PTS system glucose-specific EIICBA component (EC 2.7.1.69)
Locus tag: str0193
Name: rgfB Funciton: Exodeoxyribonuclease III (EC 3.1.11.2) |
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ptsG
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PTS system glucose-specific EIICBA component (EC 2.7.1.69)
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ptsG
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PTS system glucose-specific EIICBA component (EC 2.7.1.69)
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ptsG
|
PTS system glucose-specific EIICBA component (EC 2.7.1.69)
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ptsG
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PTS system glucose-specific EIICBA component (EC 2.7.1.69)
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rgfB
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Exodeoxyribonuclease III (EC 3.1.11.2)
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Position: -41
Score: 4.8 Sequence: TTGAAAGTGTTTTCAA
Locus tag: str0630
Name: ccpA Funciton: Carbon catabolism global transcriptional regulator CcpA, LacI family |
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ccpA
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Carbon catabolism global transcriptional regulator CcpA, LacI family
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Position: -57
Score: 3.9 Sequence: ATGAAAAGGATATAAT
Position: -34
Score: 4.7 Sequence: AAGAAAACGCTAACAA
Locus tag: str0370
Name: raiA Funciton: Ribosome-associated protein Y |
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raiA
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Ribosome-associated protein Y
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Position: -33
Score: 4.8 Sequence: ATGTAAGCGTTTAAAA
Locus tag: str0787
Name: pgm Funciton: Phosphoglucomutase (EC 5.4.2.2) |
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pgm
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Phosphoglucomutase (EC 5.4.2.2)
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Position: -50
Score: 4.3 Sequence: ATGTAAGCGTTGATAT
Locus tag: str0880
Name: adhB1 Funciton: Alcohol dehydrogenase (EC 1.1.1.1)
Locus tag: str0881
Name: adhB1 Funciton: Alcohol dehydrogenase (EC 1.1.1.1)
Locus tag: str0882
Name: adhB1 Funciton: Alcohol dehydrogenase (EC 1.1.1.1) |
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adhB1
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Alcohol dehydrogenase (EC 1.1.1.1)
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adhB1
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Alcohol dehydrogenase (EC 1.1.1.1)
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adhB1
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Alcohol dehydrogenase (EC 1.1.1.1)
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Position: -93
Score: 4.4 Sequence: ATGTAAGCGGTTACTG
Locus tag: str1657
Name: pfl Funciton: Pyruvate formate-lyase (EC 2.3.1.54) |
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pfl
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Pyruvate formate-lyase (EC 2.3.1.54)
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Position: -110
Score: 4.1 Sequence: ATGTAATCGATTACCA
Locus tag: str0359
Name: livJ Funciton: Branched-chain amino acid ABC transporter, substrate-binding protein
Locus tag: str0360
Name: livH Funciton: Branched-chain amino acid ABC transporter, permease protein 1
Locus tag: str0361
Name: livM Funciton: Branched-chain amino acid ABC transporter, permease protein 2
Locus tag: str0362
Name: livG Funciton: Branched-chain amino acid ABC transporter, ATP-binding protein 1
Locus tag: str0363
Name: livF Funciton: Branched-chain amino acid ABC transporter, ATP-binding protein 2 |
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livJ
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Branched-chain amino acid ABC transporter, substrate-binding protein
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livH
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Branched-chain amino acid ABC transporter, permease protein 1
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livM
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Branched-chain amino acid ABC transporter, permease protein 2
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livG
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Branched-chain amino acid ABC transporter, ATP-binding protein 1
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livF
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Branched-chain amino acid ABC transporter, ATP-binding protein 2
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Position: -186
Score: 4.5 Sequence: TAGTAAGGGTTTTCAA
Locus tag: str1128
Name: xylH Funciton: 4-oxalocrotonate tautomerase (EC 5.3.2.-); Xylose transport system permease protein xylH |
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xylH
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4-oxalocrotonate tautomerase (EC 5.3.2.-); Xylose transport system permease protein xylH
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Position: -35
Score: 4.8 Sequence: ATGTAAACGTATTCAA
Locus tag: str1398
Name: lacS Funciton: Lactose and galactose permease, GPH translocator family
Locus tag: str1397
Name: lacLM Funciton: Beta-galactosidase (EC 3.2.1.23) |
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lacS
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Lactose and galactose permease, GPH translocator family
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lacLM
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Beta-galactosidase (EC 3.2.1.23)
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Position: -56
Score: 4.3 Sequence: TTGTAAGGGTTATCAT
Locus tag: str1265
Name: ptsH Funciton: Phosphotransferase system, HPr-related protein
Locus tag: str1264
Name: ptsI Funciton: Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9) |
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ptsH
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Phosphotransferase system, HPr-related protein
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ptsI
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Phosphoenolpyruvate-protein kinase, PTS system component (EC 2.7.3.9)
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Position: -57
Score: 4.2 Sequence: GTGTAACCGTTTTCTA
Locus tag: str1281
Name: naoX Funciton: Predicted NADH oxidase |
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naoX
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Predicted NADH oxidase
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Position: -107
Score: 4.8 Sequence: ATGAAACCGTTATCAT
Locus tag: str1014
Name: malR Funciton: Maltose utilization transcriptional regulator MalR, LacI family |
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malR
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Maltose utilization transcriptional regulator MalR, LacI family
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Position: -109
Score: 3.8 Sequence: AGGTTAGCGTTTTATA
Position: -27
Score: 4.5 Sequence: TTGTAAACGATTACAG
Locus tag: str0399
Name: fruR Funciton: Fructose utilization transcriptional regulator FruR, DeoR family
Locus tag: str0400
Name: fruB Funciton: 1-phosphofructokinase (EC 2.7.1.56)
Locus tag: str0401
Name: fruA Funciton: Fructose-specific PTS system, IIABC component (EC 2.7.1.69)
Locus tag: str0402
Name: fruA Funciton: Fructose-specific PTS system, IIABC component (EC 2.7.1.69)
Locus tag: str0403
Name: fruA Funciton: Fructose-specific PTS system, IIABC component (EC 2.7.1.69)
Locus tag: str0404
Name: fruA Funciton: Fructose-specific PTS system, IIABC component (EC 2.7.1.69)
Locus tag: str0405
Name: fruA Funciton: Fructose-specific PTS system, IIABC component (EC 2.7.1.69)
Locus tag: str0407
Name: fruA Funciton: Fructose-specific PTS system, IIABC component (EC 2.7.1.69) |
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fruR
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Fructose utilization transcriptional regulator FruR, DeoR family
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fruB
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1-phosphofructokinase (EC 2.7.1.56)
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fruA
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Fructose-specific PTS system, IIABC component (EC 2.7.1.69)
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fruA
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Fructose-specific PTS system, IIABC component (EC 2.7.1.69)
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fruA
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Fructose-specific PTS system, IIABC component (EC 2.7.1.69)
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fruA
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Fructose-specific PTS system, IIABC component (EC 2.7.1.69)
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fruA
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Fructose-specific PTS system, IIABC component (EC 2.7.1.69)
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fruA
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Fructose-specific PTS system, IIABC component (EC 2.7.1.69)
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Position: -124
Score: 4.9 Sequence: TTGACAACGTTTTCAT
Locus tag: str0909
Name: butA Funciton: 2,3-butanediol dehydrogenase, S-alcohol forming, (R)-acetoin-specific (EC 1.1.1.4) / Acetoin (diacetyl) reductase (EC 1.1.1.5)
Locus tag: str0910
Name: butA Funciton: 2,3-butanediol dehydrogenase, S-alcohol forming, (R)-acetoin-specific (EC 1.1.1.4) / Acetoin (diacetyl) reductase (EC 1.1.1.5) |
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butA
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2,3-butanediol dehydrogenase, S-alcohol forming, (R)-acetoin-specific (EC 1.1.1.4) / Acetoin (diacetyl) reductase (EC 1.1.1.5)
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butA
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2,3-butanediol dehydrogenase, S-alcohol forming, (R)-acetoin-specific (EC 1.1.1.4) / Acetoin (diacetyl) reductase (EC 1.1.1.5)
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Position: -165
Score: 4.1 Sequence: TTGAATTCCTTTTCAT
Locus tag: str0635
Name: eno Funciton: Enolase (EC 4.2.1.11) |
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eno
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Enolase (EC 4.2.1.11)
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Position: -59
Score: 4.1 Sequence: ATGAAAAGGAATTCAA
Locus tag: str0634
Name: yuel Funciton: Conserved hypothetical protein |
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yuel
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Conserved hypothetical protein
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Position: -106
Score: 4.4 Sequence: ATGAAATCGGTTATAT
Locus tag: str0557
Name: merA Funciton: Mercuric ion reductase (EC 1.16.1.1) |
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merA
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Mercuric ion reductase (EC 1.16.1.1)
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Position: -100
Score: 4 Sequence: AGTGAAACGTTTTCAA
Locus tag: str1734
Name: scrA Funciton: Sucrose-specific PTS system, IIABC component (EC 2.7.1.69)
Locus tag: str1733
Name: scrK Funciton: Fructokinase (EC 2.7.1.4) |
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scrA
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Sucrose-specific PTS system, IIABC component (EC 2.7.1.69)
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scrK
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Fructokinase (EC 2.7.1.4)
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Position: -158
Score: 4 Sequence: TTGAAAACGTTTCACT
Locus tag: str1735
Name: scrB Funciton: Sucrose-6-phosphate hydrolase (EC 3.2.1.26)
Locus tag: str1736
Name: scrR Funciton: Sucrose operon repressor ScrR, LacI family
Locus tag: str1737
Name: scrR Funciton: Sucrose operon repressor ScrR, LacI family |
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scrB
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Sucrose-6-phosphate hydrolase (EC 3.2.1.26)
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scrR
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Sucrose operon repressor ScrR, LacI family
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scrR
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Sucrose operon repressor ScrR, LacI family
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Position: -80
Score: 4.6 Sequence: ATTATAGCGTTTACAA
Locus tag: str0657
Name: cas5-2 Funciton: CRISPR/Cas system-associated protein Cas9
Locus tag: str0658
Name: cas1 Funciton: CRISPR/Cas system-associated protein Cas1
Locus tag: str0659
Name: cas2 Funciton: CRISPR/Cas system-associated protein Cas2
Locus tag: str0660
Name: str0660 Funciton: hypothetical protein |
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cas5-2
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CRISPR/Cas system-associated protein Cas9
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cas1
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CRISPR/Cas system-associated protein Cas1
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cas2
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CRISPR/Cas system-associated protein Cas2
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str0660
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hypothetical protein
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Position: -94
Score: 4.5 Sequence: TTGATAGCCTTTTCAT
Locus tag: str1121
Name: rpiA Funciton: Ribose 5-phosphate isomerase A (EC 5.3.1.6)
Locus tag: str1120
Name: deoB Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: str1118
Name: arsC Funciton: Arsenate reductase (EC 1.20.4.1)
Locus tag: str1117
Name: punA Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1) |
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rpiA
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Ribose 5-phosphate isomerase A (EC 5.3.1.6)
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deoB
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Phosphopentomutase (EC 5.4.2.7)
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arsC
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Arsenate reductase (EC 1.20.4.1)
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punA
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Purine nucleoside phosphorylase (EC 2.4.2.1)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |