Regulon of CcpA in Streptococcus pneumoniae TIGR4
| Regulator type: | Transcription factor |
| TF locus tag: | SP_1999 |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Global catabolite repression |
| Effector: | Fructose-1,6-bisphosphate; HPr, phosphocarrier protein |
| Regulog: | CcpA - Streptococcaceae |
| Statistics of regulated genes: | |
| - Genes | 171 |
| - Operons | 73 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Streptococcaceae
- By trascription factor - CcpA
- By TF family - LacI
- By effector - Fructose-1,6-bisphosphate
- By effector - HPr, phosphocarrier protein
- By pathway - Global catabolite repression
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -54
Score: 4.2 Sequence: AAGAAAACGATTACAC
Locus tag: SP_1853
Name: galK Funciton: Galactokinase (EC 2.7.1.6)
Locus tag: SP_1852
Name: galT Funciton: Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10) |
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galK
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Galactokinase (EC 2.7.1.6)
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galT
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Galactose-1-phosphate uridylyltransferase (EC 2.7.7.10)
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Position: -120
Score: 4.4 Sequence: CAGAAAGCGTTGTCAA
Locus tag: SP_0473
Name: celQ Funciton: Predicted cellobiose repressor, ROK family |
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celQ
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Predicted cellobiose repressor, ROK family
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Position: -92
Score: 4.2 Sequence: GTGAAAACGATTTAAT
Locus tag: SP_1416
Name: queA Funciton: S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-) |
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queA
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S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 5.-.-.-)
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Position: -52
Score: 4.6 Sequence: ATTTAAGCGCTTTTAT
Locus tag: SP_0410
Name: shetA Funciton: Exfoliative toxin A |
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shetA
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Exfoliative toxin A
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Position: -44
Score: 4.3 Sequence: ATATAATCGCTATCAA
Locus tag: SP_0057
Name: hexB Funciton: Beta-hexosaminidase (EC 3.2.1.52) |
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hexB
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Beta-hexosaminidase (EC 3.2.1.52)
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Position: -66
Score: 4.8 Sequence: AAGAATGCGTTTTCAT
Locus tag: SP_0303
Name: bglA Funciton: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
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bglA
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6-phospho-beta-glucosidase (EC 3.2.1.86)
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Position: -94
Score: 4.4 Sequence: ATGAAACTGTTTACAA
Position: -72
Score: 3.7 Sequence: AATAATGCGTTATAAT
Locus tag: SP_2026
Name: adhE Funciton: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) |
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adhE
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Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
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Position: -63
Score: 4.1 Sequence: TTGGTATCGTTTACAA
Locus tag: SP_1884
Name: treP Funciton: Trehalose-specific PTS system, IIABC components (EC 2.7.1.69)
Locus tag: SP_1883
Name: treA Funciton: Trehalose-6-phosphate hydrolase (EC 3.2.1.93) |
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treP
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Trehalose-specific PTS system, IIABC components (EC 2.7.1.69)
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treA
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Trehalose-6-phosphate hydrolase (EC 3.2.1.93)
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Position: -52
Score: 4.8 Sequence: ATAAAATCGCTTTCAA
Locus tag: SP_1722
Name: scrA Funciton: Sucrose-specific PTS system, IIABC component (EC 2.7.1.69)
Locus tag: SP_1721
Name: scrK Funciton: Fructokinase (EC 2.7.1.4) |
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scrA
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Sucrose-specific PTS system, IIABC component (EC 2.7.1.69)
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scrK
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Fructokinase (EC 2.7.1.4)
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Position: -55
Score: 4.9 Sequence: TATAAAGCGTTTTCAT
Locus tag: SP_1580
Name: msmK Funciton: Multiple sugar ABC transporter, ATP-binding protein |
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msmK
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Multiple sugar ABC transporter, ATP-binding protein
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Position: -102
Score: 4.1 Sequence: ATGAAAACGATTTATC
Locus tag: SP_0896
Name: pfk Funciton: 6-phosphofructokinase (EC 2.7.1.11)
Locus tag: SP_0897
Name: pyk Funciton: Pyruvate kinase (EC 2.7.1.40) |
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pfk
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6-phosphofructokinase (EC 2.7.1.11)
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pyk
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Pyruvate kinase (EC 2.7.1.40)
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Position: -68
Score: 4.6 Sequence: ATGAAAACGGTTTATA
Locus tag: SP_0284
Name: manL Funciton: PTS system, mannose-specific IIAB components
Locus tag: SP_0283
Name: manM Funciton: PTS system, mannose-specific IIC component (EC 2.7.1.69)
Locus tag: SP_0282
Name: manN Funciton: PTS system, mannose-specific IID component (EC 2.7.1.69) |
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manL
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PTS system, mannose-specific IIAB components
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manM
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PTS system, mannose-specific IIC component (EC 2.7.1.69)
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manN
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PTS system, mannose-specific IID component (EC 2.7.1.69)
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Position: -128
Score: 4.8 Sequence: TAGAAACCGTTTACAA
Locus tag: SP_0314
Name: hyl Funciton: Hyaluronate lyase precursor (EC 4.2.2.1) |
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hyl
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Hyaluronate lyase precursor (EC 4.2.2.1)
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Position: -107
Score: 4.6 Sequence: ATGAAAGCGCTAATAT
Position: -63
Score: 3.8 Sequence: AAATAAAGGATTACAA
Locus tag: SP_0321
Name: hylD Funciton: PTS system, hyaluronate-oligosaccharide-specific IIA component (EC 2.7.1.69)
Locus tag: SP_0322
Name: ugl Funciton: Unsaturated glucuronyl hydrolase (EC 3.2.1.-)
Locus tag: SP_0323
Name: hylE Funciton: PTS system, hyaluronate-oligosaccharide-specific IIB component (EC 2.7.1.69)
Locus tag: SP_0324
Name: hylF Funciton: PTS system, hyaluronate-oligosaccharide-specific IIC component (EC 2.7.1.69)
Locus tag: SP_0325
Name: hylG Funciton: PTS system, hyaluronate-oligosaccharide-specific IID component (EC 2.7.1.69)
Locus tag: SP_0326
Name: yajC Funciton: Preprotein translocase subunit YajC (TC 3.A.5.1.1)
Locus tag: SP_0327
Name: ohl Funciton: Oligohyaluronate lyase (EC 4.2.2.-) |
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hylD
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PTS system, hyaluronate-oligosaccharide-specific IIA component (EC 2.7.1.69)
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ugl
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Unsaturated glucuronyl hydrolase (EC 3.2.1.-)
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hylE
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PTS system, hyaluronate-oligosaccharide-specific IIB component (EC 2.7.1.69)
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hylF
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PTS system, hyaluronate-oligosaccharide-specific IIC component (EC 2.7.1.69)
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hylG
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PTS system, hyaluronate-oligosaccharide-specific IID component (EC 2.7.1.69)
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yajC
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Preprotein translocase subunit YajC (TC 3.A.5.1.1)
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ohl
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Oligohyaluronate lyase (EC 4.2.2.-)
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Position: -44
Score: 4.6 Sequence: TTGACAACGGTTTCAT
Locus tag: SP_0645
Name: gatA Funciton: PTS system, galactose-specific IIA component (EC 2.7.1.69)
Locus tag: SP_0646
Name: gatB Funciton: PTS system, galactose-specific IIB component (EC 2.7.1.69)
Locus tag: SP_0647
Name: gatC Funciton: PTS system, galactose-specific IIC component (EC 2.7.1.69) |
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gatA
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PTS system, galactose-specific IIA component (EC 2.7.1.69)
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gatB
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PTS system, galactose-specific IIB component (EC 2.7.1.69)
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gatC
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PTS system, galactose-specific IIC component (EC 2.7.1.69)
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Position: -75
Score: 4.8 Sequence: AAGAAAGCGCTTTATT
Locus tag: SP_2186
Name: glpK Funciton: Glycerol kinase (EC 2.7.1.30)
Locus tag: SP_2185
Name: glpD Funciton: Alpha-glycerophosphate oxidase (EC 1.1.3.21)
Locus tag: SP_2184
Name: glpF Funciton: Glycerol uptake facilitator protein |
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glpK
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Glycerol kinase (EC 2.7.1.30)
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glpD
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Alpha-glycerophosphate oxidase (EC 1.1.3.21)
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glpF
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Glycerol uptake facilitator protein
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Position: 0
Score: 4.1 Sequence: ATGAAAGCCATTATAA
Locus tag: SP_0238
Name: SP_0238 Funciton: Predicted transcriptional regulator, ACT family
Locus tag: SP_0239
Name: SP_0238 Funciton: Glycerol-3-phosphate dehydrogenase homolog (EC 1.1.1.94) |
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SP_0238
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Predicted transcriptional regulator, ACT family
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SP_0238
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Glycerol-3-phosphate dehydrogenase homolog (EC 1.1.1.94)
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Position: -111
Score: 3.9 Sequence: TTGATATCGGTTTTTT
Locus tag: SP_1602
Name: phnA Funciton: Zn-ribbon-containing protein involved in phosphonate metabolism |
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phnA
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Zn-ribbon-containing protein involved in phosphonate metabolism
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Position: -117
Score: 4.3 Sequence: ACTAAAACGTTTACAT
Locus tag: SP_1220
Name: ldh Funciton: L-lactate dehydrogenase (EC 1.1.1.27) |
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ldh
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L-lactate dehydrogenase (EC 1.1.1.27)
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Position: -126
Score: 4.2 Sequence: GTGTAATCGTTTTCTT
Locus tag: SP_1854
Name: galR Funciton: Galactose utilization transcriptional regulator GalR, LacI family |
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galR
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Galactose utilization transcriptional regulator GalR, LacI family
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Position: -106
Score: 4.3 Sequence: TTGAAAGCGGATTTAT
Locus tag: SP_1097
Name: yjbM Funciton: GTP pyrophosphokinase (EC 2.7.6.5)
Locus tag: SP_1098
Name: ppnK Funciton: Predicted inorganic polyphosphate/ATP-NAD kinase
Locus tag: SP_1099
Name: yjbO Funciton: Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YjbO type |
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yjbM
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GTP pyrophosphokinase (EC 2.7.6.5)
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ppnK
|
Predicted inorganic polyphosphate/ATP-NAD kinase
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yjbO
|
Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YjbO type
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Position: -154
Score: 3.9 Sequence: AGGCAAACGCTTGCAT
Locus tag: SP_0636
Name: drrA Funciton: Daunorubicin resistance ATP-binding protein drrA
Locus tag: SP_0637
Name: drrB Funciton: Daunorubicin resistance transmembrane protein drrB
Locus tag: SP_0638
Name: drrC Funciton: Daunorubicin resistance transmembrane protein drrC |
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drrA
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Daunorubicin resistance ATP-binding protein drrA
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drrB
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Daunorubicin resistance transmembrane protein drrB
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drrC
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Daunorubicin resistance transmembrane protein drrC
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Position: -98
Score: 4.4 Sequence: TTGCAACCGTTTTCTA
Locus tag: SP_2108
Name: malX Funciton: Maltose/maltodextrin ABC transporter, substrate-binding protein
Locus tag: SP_2109
Name: malC Funciton: Maltose/maltodextrin ABC transporter, permease protein 1
Locus tag: SP_2110
Name: malD Funciton: Maltose/maltodextrin ABC transporter, permease protein 2
Locus tag: SP_2111
Name: malA Funciton: Maltodextrose utilization protein MalA |
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malX
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Maltose/maltodextrin ABC transporter, substrate-binding protein
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malC
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Maltose/maltodextrin ABC transporter, permease protein 1
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malD
|
Maltose/maltodextrin ABC transporter, permease protein 2
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malA
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Maltodextrose utilization protein MalA
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Position: -68
Score: 4.3 Sequence: ATGTAAGCGTTTGATA
Locus tag: SP_0754
Name: acuB Funciton: Acetoin utilization protein AcuB |
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acuB
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Acetoin utilization protein AcuB
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Position: -102
Score: 4.4 Sequence: ATAAAAGCCTTTACAA
Locus tag: SP_0758
Name: ptsG Funciton: PTS system glucose-specific EIICBA component (EC 2.7.1.69)
Locus tag: SP_0759
Name: SP_0759 Funciton: Hypothetical protein
Locus tag: SP_0760
Name: rgfB Funciton: Exodeoxyribonuclease III (EC 3.1.11.2) |
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ptsG
|
PTS system glucose-specific EIICBA component (EC 2.7.1.69)
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SP_0759
|
Hypothetical protein
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rgfB
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Exodeoxyribonuclease III (EC 3.1.11.2)
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Position: -79
Score: 5.1 Sequence: TAGAAAGCGTTTTCTT
Locus tag: SP_2152
Name: arcD Funciton: Arginine/ornithine antiporter
Locus tag: SP_2153
Name: arcT Funciton: Xaa-His dipeptidase (EC 3.4.13.3) |
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arcD
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Arginine/ornithine antiporter
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arcT
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Xaa-His dipeptidase (EC 3.4.13.3)
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Position: -137
Score: 4 Sequence: GAGAAAGGGTTTACAT
Locus tag: SP_0605
Name: fbaA Funciton: Fructose-bisphosphate aldolase class II (EC 4.1.2.13) |
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fbaA
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Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
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Position: -137
Score: 4.1 Sequence: TTGTAAACGATACCAA
Locus tag: SP_1885
Name: treR Funciton: Trehalose utilization transcriptional regulator TreR, GntR family |
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treR
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Trehalose utilization transcriptional regulator TreR, GntR family
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Position: -28
Score: 4.3 Sequence: ATGATAGCGATTAAAT
Locus tag: SP_1584
Name: codY Funciton: Amino acid metabolism global transcriptional regulator CodY, CodY family
Locus tag: SP_1583
Name: pncA Funciton: Nicotinamidase (EC 3.5.1.19) |
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codY
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Amino acid metabolism global transcriptional regulator CodY, CodY family
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pncA
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Nicotinamidase (EC 3.5.1.19)
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Position: -150
Score: 4.6 Sequence: TTGAAAGTGTTTACAA
Locus tag: SP_1999
Name: ccpA Funciton: Carbon catabolism global transcriptional regulator CcpA, LacI family |
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ccpA
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Carbon catabolism global transcriptional regulator CcpA, LacI family
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Position: -72
Score: 4 Sequence: ATGTAAGGGCTTCAAT
Locus tag: SP_1470
Name: apbE Funciton: Predicted thiamine biosynthesis lipoprotein |
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apbE
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Predicted thiamine biosynthesis lipoprotein
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Position: -85
Score: 4.4 Sequence: TTTAAAGTGCTTACAT
Locus tag: SP_1506
Name: ywcC Funciton: 6-phosphogluconolactonase (EC 3.1.1.31) |
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ywcC
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6-phosphogluconolactonase (EC 3.1.1.31)
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Position: -41
Score: 4.3 Sequence: CTGTAAGCATTTTCAA
Locus tag: SP_0668
Name: glcK Funciton: Glucokinase (EC 2.7.1.2) |
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glcK
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Glucokinase (EC 2.7.1.2)
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Position: -30
Score: 4.9 Sequence: TTGAAAACGCTTAAAA
Locus tag: SP_2044
Name: ackA Funciton: Acetate kinase (EC 2.7.2.1) |
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ackA
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Acetate kinase (EC 2.7.2.1)
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Position: -16
Score: 4.1 Sequence: ATGAAAGGGATAACAA
Locus tag: SP_2187
Name: hcaR Funciton: Predicted NADH peroxidase transcriptional regulator |
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hcaR
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Predicted NADH peroxidase transcriptional regulator
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Position: -55
Score: 4 Sequence: TTTTAAAGGTTTTTAA
Locus tag: SP_0394
Name: mtlA Funciton: Mannitol-specific PTS system, IIBC component (EC 2.7.1.69)
Locus tag: SP_0395
Name: mtlR Funciton: Mannitol operon antiterminator, BglG family
Locus tag: SP_0396
Name: mtlF Funciton: Mannitol-specific PTS system, mannitol-specific IIA component (EC 2.7.1.69)
Locus tag: SP_0397
Name: mtlD Funciton: Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) |
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mtlA
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Mannitol-specific PTS system, IIBC component (EC 2.7.1.69)
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mtlR
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Mannitol operon antiterminator, BglG family
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mtlF
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Mannitol-specific PTS system, mannitol-specific IIA component (EC 2.7.1.69)
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mtlD
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Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)
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Position: -57
Score: 4.7 Sequence: ATGAAAGCGTTATAAT
Locus tag: SP_2206
Name: raiA Funciton: Ribosome-associated protein Y |
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raiA
|
Ribosome-associated protein Y
|
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Position: -77
Score: 4.4 Sequence: AAGTAAGCGTTCACAT
Locus tag: SP_2167
Name: fucK Funciton: L-fuculokinase (EC 2.7.1.51)
Locus tag: SP_2166
Name: fucA Funciton: L-fuculose phosphate aldolase (EC 4.1.2.17)
Locus tag: SP_2165
Name: fucU Funciton: L-fucose mutarotase (EC 5.1.3.-)
Locus tag: SP_2164
Name: fucV Funciton: Predicted L-fucose-specific phosphotransferase system, EIIA component
Locus tag: SP_2163
Name: fucW Funciton: Predicted L-fucose-specific phosphotransferase system, EIIB component
Locus tag: SP_2162
Name: fucX Funciton: Predicted L-fucose-specific phosphotransferase system, EIIC component
Locus tag: SP_2161
Name: fucY Funciton: Predicted L-fucose-specific phosphotransferase system, EIID component
Locus tag: SP_2160
Name: fucO Funciton: Alpha-L-fucosidase
Locus tag: SP_2159
Name: fucL Funciton: Fucolectin-related protein
Locus tag: SP_2158
Name: fucI Funciton: L-fucose isomerase (EC 5.3.1.25) |
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fucK
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L-fuculokinase (EC 2.7.1.51)
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fucA
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L-fuculose phosphate aldolase (EC 4.1.2.17)
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fucU
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L-fucose mutarotase (EC 5.1.3.-)
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fucV
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Predicted L-fucose-specific phosphotransferase system, EIIA component
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fucW
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Predicted L-fucose-specific phosphotransferase system, EIIB component
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fucX
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Predicted L-fucose-specific phosphotransferase system, EIIC component
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fucY
|
Predicted L-fucose-specific phosphotransferase system, EIID component
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fucO
|
Alpha-L-fucosidase
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fucL
|
Fucolectin-related protein
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fucI
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L-fucose isomerase (EC 5.3.1.25)
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Position: -64
Score: 4.5 Sequence: AAGAAACCGCTTTATT
Locus tag: SP_0839
Name: coaA Funciton: Pantothenate kinase (EC 2.7.1.33) |
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coaA
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Pantothenate kinase (EC 2.7.1.33)
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Position: -102
Score: 4.5 Sequence: AGGAAAACGTTATCAT
Locus tag: SP_0749
Name: livJ Funciton: Branched-chain amino acid ABC transporter, substrate-binding protein
Locus tag: SP_0750
Name: livH Funciton: Branched-chain amino acid ABC transporter, permease protein 1
Locus tag: SP_0751
Name: livM Funciton: Branched-chain amino acid ABC transporter, permease protein 2
Locus tag: SP_0752
Name: livG Funciton: Branched-chain amino acid ABC transporter, ATP-binding protein 1
Locus tag: SP_0753
Name: livF Funciton: Branched-chain amino acid ABC transporter, ATP-binding protein 2 |
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livJ
|
Branched-chain amino acid ABC transporter, substrate-binding protein
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livH
|
Branched-chain amino acid ABC transporter, permease protein 1
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livM
|
Branched-chain amino acid ABC transporter, permease protein 2
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livG
|
Branched-chain amino acid ABC transporter, ATP-binding protein 1
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livF
|
Branched-chain amino acid ABC transporter, ATP-binding protein 2
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Position: -38
Score: 4.5 Sequence: TTGAAAGCGATATAAT
Locus tag: SP_1621
Name: bglG Funciton: Predicted transcription antiterminator, BglG family
Locus tag: SP_1620
Name: alsA Funciton: Predictes allulose PTS system, component IIA
Locus tag: SP_1619
Name: alsB Funciton: Predictes allulose PTS system, component IIA
Locus tag: SP_1618
Name: alsC Funciton: Predictes allulose PTS system, component IIB
Locus tag: SP_1617
Name: alsD Funciton: Predictes allulose PTS system, component IIBC
Locus tag: SP_1616
Name: alsE Funciton: Allulose-6-phosphate 3-epimerase (EC 5.1.3.-)
Locus tag: SP_1615
Name: tkt2 Funciton: Transketolase (EC 2.2.1.1) |
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bglG
|
Predicted transcription antiterminator, BglG family
|
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alsA
|
Predictes allulose PTS system, component IIA
|
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alsB
|
Predictes allulose PTS system, component IIA
|
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alsC
|
Predictes allulose PTS system, component IIB
|
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alsD
|
Predictes allulose PTS system, component IIBC
|
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alsE
|
Allulose-6-phosphate 3-epimerase (EC 5.1.3.-)
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tkt2
|
Transketolase (EC 2.2.1.1)
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Position: -110
Score: 4.5 Sequence: TTAAAAACGCTTGCAA
Locus tag: SP_2107
Name: malM Funciton: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
Locus tag: SP_2106
Name: malP Funciton: Maltodextrin phosphorylase (EC 2.4.1.1) |
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malM
|
4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
|
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malP
|
Maltodextrin phosphorylase (EC 2.4.1.1)
|
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Position: -55
Score: 4.3 Sequence: TGGAAAGCGATTTCAG
Locus tag: SP_1898
Name: agaL Funciton: Alpha-galactosidase (EC 3.2.1.22)
Locus tag: SP_1897
Name: msmE Funciton: Multiple sugar ABC transporter, substrate-binding protein
Locus tag: SP_1896
Name: msmF Funciton: Multiple sugar ABC transporter, permease protein 2
Locus tag: SP_1895
Name: msmG Funciton: Multiple sugar ABC transporter, permease protein 1 |
|||
|
agaL
|
Alpha-galactosidase (EC 3.2.1.22)
|
||
|
msmE
|
Multiple sugar ABC transporter, substrate-binding protein
|
||
|
msmF
|
Multiple sugar ABC transporter, permease protein 2
|
||
|
msmG
|
Multiple sugar ABC transporter, permease protein 1
|
||
|
Position: -130
Score: 4.1 Sequence: TGGAAAAGGCTTTCTT
Locus tag: SP_0285
Name: adhB1 Funciton: Alcohol dehydrogenase (EC 1.1.1.1) |
|||
|
adhB1
|
Alcohol dehydrogenase (EC 1.1.1.1)
|
||
|
Position: -37
Score: 4.3 Sequence: ATGAAAGCGCAAACTT
Locus tag: SP_0060
Name: bgaC Funciton: Beta-galactosidase (EC 3.2.1.23)
Locus tag: SP_0061
Name: agaB Funciton: Predicted galactosamine-specific PTS, EIIB component (EC 2.7.1.69)
Locus tag: SP_0062
Name: agaC Funciton: Predicted galactosamine-specific PTS, EIIC component (EC 2.7.1.69)
Locus tag: SP_0063
Name: agaD Funciton: Predicted galactosamine-specific PTS, EIID component (EC 2.7.1.69)
Locus tag: SP_0064
Name: agaE Funciton: Predicted galactosamine-specific PTS, EIIA component (EC 2.7.1.69) |
|||
|
bgaC
|
Beta-galactosidase (EC 3.2.1.23)
|
||
|
agaB
|
Predicted galactosamine-specific PTS, EIIB component (EC 2.7.1.69)
|
||
|
agaC
|
Predicted galactosamine-specific PTS, EIIC component (EC 2.7.1.69)
|
||
|
agaD
|
Predicted galactosamine-specific PTS, EIID component (EC 2.7.1.69)
|
||
|
agaE
|
Predicted galactosamine-specific PTS, EIIA component (EC 2.7.1.69)
|
||
|
Position: -78
Score: 4.5 Sequence: TTGAAATCGGTTACTA
Locus tag: SP_0459
Name: pfl Funciton: Pyruvate formate-lyase (EC 2.3.1.54) |
|||
|
pfl
|
Pyruvate formate-lyase (EC 2.3.1.54)
|
||
|
Position: -30
Score: 4.8 Sequence: TAGAAAACGCTTACAG
Locus tag: SP_1121
Name: glgB Funciton: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)
Locus tag: SP_1122
Name: glgC Funciton: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
Locus tag: SP_1123
Name: glgD Funciton: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
Locus tag: SP_1124
Name: glgA Funciton: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
|||
|
glgB
|
1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)
|
||
|
glgC
|
Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
|
||
|
glgD
|
Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
|
||
|
glgA
|
Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
|
||
|
Position: -63
Score: 4.4 Sequence: TTGACAACGCTTTCTG
Locus tag: SP_0474
Name: celZ2 Funciton: PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
Locus tag: SP_0475
Name: SP_0475 Funciton: Hypothetical protein |
|||
|
celZ2
|
PTS system, cellobiose-specific IIC component (EC 2.7.1.69)
|
||
|
SP_0475
|
Hypothetical protein
|
||
|
Position: -37
Score: 4.3 Sequence: ATAAATCCGCTTTCAA
Locus tag: SP_1096
Name: yjbK Funciton: Adenylate cyclase |
|||
|
yjbK
|
Adenylate cyclase
|
||
|
Position: -140
Score: 4.9 Sequence: ATAAAAACGCTTACAA
Locus tag: SP_1491
Name: glpF2 Funciton: Glycerol uptake facilitator protein |
|||
|
glpF2
|
Glycerol uptake facilitator protein
|
||
|
Position: -29
Score: 4.9 Sequence: TATAAAACGTTTTCAA
Locus tag: SP_1976
Name: pflA Funciton: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) |
|||
|
pflA
|
Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
|
||
|
Position: -50
Score: 4.8 Sequence: TATAAAGCGCTTTCTT
Locus tag: SP_0498
Name: hexA Funciton: Endo-beta-N-acetylglucosaminidase (EC 3.2.1.96) |
|||
|
hexA
|
Endo-beta-N-acetylglucosaminidase (EC 3.2.1.96)
|
||
|
Position: -169
Score: 4.3 Sequence: ATAAAAACGGTTACAG
Locus tag: SP_0576
Name: licT Funciton: Beta-glucoside bgl operon transcriptional antiterminator, BglG family
Locus tag: SP_0577
Name: bglP Funciton: Beta-glucoside-specific PTS system, IIBCA component (EC 2.7.1.69)
Locus tag: SP_0578
Name: bglH Funciton: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
|||
|
licT
|
Beta-glucoside bgl operon transcriptional antiterminator, BglG family
|
||
|
bglP
|
Beta-glucoside-specific PTS system, IIBCA component (EC 2.7.1.69)
|
||
|
bglH
|
6-phospho-beta-glucosidase (EC 3.2.1.86)
|
||
|
Position: -70
Score: 4.8 Sequence: AAGAAAACGCTTGCAT
Locus tag: SP_0268
Name: pulA Funciton: Pullulanase (EC 3.2.1.41) |
|||
|
pulA
|
Pullulanase (EC 3.2.1.41)
|
||
|
Position: -68
Score: 4.3 Sequence: CTGAAATCGCTTTCCA
Locus tag: SP_1899
Name: msmR Funciton: MSM (multiple sugar metabolism) operon regulatory protein |
|||
|
msmR
|
MSM (multiple sugar metabolism) operon regulatory protein
|
||
|
Position: -93
Score: 4.3 Sequence: TATTAAACGCTTCCAA
Locus tag: SP_1514
Name: atpE Funciton: ATP synthase C chain (EC 3.6.3.14)
Locus tag: SP_1513
Name: atpB Funciton: ATP synthase A chain (EC 3.6.3.14)
Locus tag: SP_1512
Name: atpF Funciton: ATP synthase B chain (EC 3.6.3.14)
Locus tag: SP_1511
Name: atpH Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: SP_1510
Name: atpA Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: SP_1509
Name: atpG Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: SP_1508
Name: atpD Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: SP_1507
Name: atpC Funciton: ATP synthase epsilon chain (EC 3.6.3.14) |
|||
|
atpE
|
ATP synthase C chain (EC 3.6.3.14)
|
||
|
atpB
|
ATP synthase A chain (EC 3.6.3.14)
|
||
|
atpF
|
ATP synthase B chain (EC 3.6.3.14)
|
||
|
atpH
|
ATP synthase delta chain (EC 3.6.3.14)
|
||
|
atpA
|
ATP synthase alpha chain (EC 3.6.3.14)
|
||
|
atpG
|
ATP synthase gamma chain (EC 3.6.3.14)
|
||
|
atpD
|
ATP synthase beta chain (EC 3.6.3.14)
|
||
|
atpC
|
ATP synthase epsilon chain (EC 3.6.3.14)
|
||
|
Position: -32
Score: 5 Sequence: ATGTAAACGTTTACTT
Locus tag: SP_1331
Name: nanR Funciton: Sialic acid utilization transcriptional regulator NanR, RpiR family
Locus tag: SP_1330
Name: nanE Funciton: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
Locus tag: SP_1329
Name: nanA2 Funciton: N-acetylneuraminate lyase (EC 4.1.3.3)
Locus tag: SP_1328
Name: nanT Funciton: Predicted sialic acid transporter
Locus tag: SP_1327
Name: yjgK Funciton: Conserved hypothetical protein
Locus tag: SP_1326
Name: neuA Funciton: Sialidase (EC 3.2.1.18)
Locus tag: SP_1325
Name: yjhC Funciton: Predicted oxidoreductase (EC 1.1.1.-)
Locus tag: SP_1324
Name: nanK Funciton: N-acetylmannosamine kinase (EC 2.7.1.60) |
|||
|
nanR
|
Sialic acid utilization transcriptional regulator NanR, RpiR family
|
||
|
nanE
|
N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
|
||
|
nanA2
|
N-acetylneuraminate lyase (EC 4.1.3.3)
|
||
|
nanT
|
Predicted sialic acid transporter
|
||
|
yjgK
|
Conserved hypothetical protein
|
||
|
neuA
|
Sialidase (EC 3.2.1.18)
|
||
|
yjhC
|
Predicted oxidoreductase (EC 1.1.1.-)
|
||
|
nanK
|
N-acetylmannosamine kinase (EC 2.7.1.60)
|
||
|
Position: -63
Score: 5.1 Sequence: TTGAAAGCGTTTTAAT
Locus tag: SP_1685
Name: nanE Funciton: N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
Locus tag: SP_1684
Name: nanP Funciton: PTS system, N-acetylglucosamine-specific IIABC component (EC 2.7.1.69) |
|||
|
nanE
|
N-acetylmannosamine-6-phosphate 2-epimerase (EC 5.1.3.9)
|
||
|
nanP
|
PTS system, N-acetylglucosamine-specific IIABC component (EC 2.7.1.69)
|
||
|
Position: -71
Score: 4.5 Sequence: ATGAAATCGCATACAA
Locus tag: SP_1683
Name: nanU Funciton: N-acetylneuraminate ABC transporter, substrate-binding protein
Locus tag: SP_1682
Name: nanV Funciton: N-acetylneuraminate ABC transporter, permease protein 1
Locus tag: SP_1681
Name: nanW Funciton: N-acetylneuraminate ABC transporter, permease protein 2 |
|||
|
nanU
|
N-acetylneuraminate ABC transporter, substrate-binding protein
|
||
|
nanV
|
N-acetylneuraminate ABC transporter, permease protein 1
|
||
|
nanW
|
N-acetylneuraminate ABC transporter, permease protein 2
|
||
|
Position: -53
Score: 3.9 Sequence: TAGAAAATGTTATAAT
Locus tag: SP_0400
Name: ropA Funciton: Cell division trigger factor (EC 5.2.1.8) |
|||
|
ropA
|
Cell division trigger factor (EC 5.2.1.8)
|
||
|
Position: -124
Score: 4.7 Sequence: AAGAAAGCGATTACTT
Locus tag: SP_1128
Name: eno Funciton: Enolase (EC 4.2.1.11) |
|||
|
eno
|
Enolase (EC 4.2.1.11)
|
||
|
Position: -55
Score: 4.7 Sequence: AAGTAATCGCTTTCTT
Locus tag: SP_1127
Name: yuel Funciton: Conserved hypothetical protein |
|||
|
yuel
|
Conserved hypothetical protein
|
||
|
Position: -90
Score: 4.5 Sequence: TTGGAAACGCTTTATT
Locus tag: SP_0305
Name: celB Funciton: Cellobiose-specific PTS, component EIIB
Locus tag: SP_0306
Name: celR Funciton: Cellobiose utilization transcriptional regulator CelR, BglG family
Locus tag: SP_0307
Name: celR Funciton: Cellobiose utilization transcriptional regulator CelR, BglG family
Locus tag: SP_0308
Name: celA Funciton: Cellobiose-specific PTS, component EIIA
Locus tag: SP_0309
Name: SP_0309 Funciton: Conserved hypothetical protein
Locus tag: SP_0310
Name: celD Funciton: Cellobiose-specific PTS, component EIIC |
|||
|
celB
|
Cellobiose-specific PTS, component EIIB
|
||
|
celR
|
Cellobiose utilization transcriptional regulator CelR, BglG family
|
||
|
celR
|
Cellobiose utilization transcriptional regulator CelR, BglG family
|
||
|
celA
|
Cellobiose-specific PTS, component EIIA
|
||
|
SP_0309
|
Conserved hypothetical protein
|
||
|
celD
|
Cellobiose-specific PTS, component EIIC
|
||
|
Position: -34
Score: 4.5 Sequence: AAGCAAACGCTTACTT
Locus tag: SP_0715
Name: lctO Funciton: Lactate 2-monooxygenase (EC 1.13.12.4) |
|||
|
lctO
|
Lactate 2-monooxygenase (EC 1.13.12.4)
|
||
|
Position: -68
Score: 4.3 Sequence: CAGAAAACGCTTCCTA
Locus tag: SP_1215
Name: yrhG Funciton: Predicted permease |
|||
|
yrhG
|
Predicted permease
|
||
|
Position: -97
Score: 4.5 Sequence: TGGAAAGCGTTTTTAT
Locus tag: SP_1588
Name: merA Funciton: Mercuric ion reductase (EC 1.16.1.1) |
|||
|
merA
|
Mercuric ion reductase (EC 1.16.1.1)
|
||
|
Position: -56
Score: 4.3 Sequence: TTGTAAAGGCTATCAA
Locus tag: SP_1717
Name: natA Funciton: Na+ export ABC transporter, ATP-binding protein
Locus tag: SP_1716
Name: natB Funciton: Na+ export ABC transporter, permease protein |
|||
|
natA
|
Na+ export ABC transporter, ATP-binding protein
|
||
|
natB
|
Na+ export ABC transporter, permease protein
|
||
|
Position: -150
Score: 4.6 Sequence: CAGAAAGCGCTATCAA
Locus tag: SP_1798
Name: susT1 Funciton: Fructooligosaccharides ABC transporter, permease protein 1
Locus tag: SP_1797
Name: susT2 Funciton: Fructooligosaccharides ABC transporter, permease protein 2
Locus tag: SP_1796
Name: susX Funciton: Fructooligosaccharides ABC transporter, substrate-binding protein
Locus tag: SP_1795
Name: susH Funciton: Fructooligosaccharides hydrolase |
|||
|
susT1
|
Fructooligosaccharides ABC transporter, permease protein 1
|
||
|
susT2
|
Fructooligosaccharides ABC transporter, permease protein 2
|
||
|
susX
|
Fructooligosaccharides ABC transporter, substrate-binding protein
|
||
|
susH
|
Fructooligosaccharides hydrolase
|
||
|
Position: -180
Score: 4.6 Sequence: ATGTAAAGGTTTACAA
Locus tag: SP_1187
Name: lacT Funciton: Predicted transcription antiterminator LacT, BglG family
Locus tag: SP_1186
Name: lacF Funciton: Lactose-specific PTS system, IIA component (EC 2.7.1.69)
Locus tag: SP_1185
Name: lacE Funciton: Lactose-specific PTS system, IIBC component (EC 2.7.1.69)
Locus tag: SP_1184
Name: lacG Funciton: 6-phospho-beta-galactosidase (EC 3.2.1.85) |
|||
|
lacT
|
Predicted transcription antiterminator LacT, BglG family
|
||
|
lacF
|
Lactose-specific PTS system, IIA component (EC 2.7.1.69)
|
||
|
lacE
|
Lactose-specific PTS system, IIBC component (EC 2.7.1.69)
|
||
|
lacG
|
6-phospho-beta-galactosidase (EC 3.2.1.85)
|
||
|
Position: -53
Score: 4.4 Sequence: ATAAAAGCCTTTACAT
Locus tag: SP_0828
Name: rpiA Funciton: Ribose 5-phosphate isomerase A (EC 5.3.1.6)
Locus tag: SP_0829
Name: deoB Funciton: Phosphopentomutase (EC 5.4.2.7)
Locus tag: SP_0830
Name: SMU.1232c Funciton: Conserved hypothetical protein
Locus tag: SP_0831
Name: punA Funciton: Purine nucleoside phosphorylase (EC 2.4.2.1) |
|||
|
rpiA
|
Ribose 5-phosphate isomerase A (EC 5.3.1.6)
|
||
|
deoB
|
Phosphopentomutase (EC 5.4.2.7)
|
||
|
SMU.1232c
|
Conserved hypothetical protein
|
||
|
punA
|
Purine nucleoside phosphorylase (EC 2.4.2.1)
|
||
|
Position: -114
Score: 4.4 Sequence: ATGTGAACGCTTACTT
Locus tag: SP_2168
Name: fucR Funciton: L-fucose utilization transcriptional regulator FucR, DeoR family |
|||
|
fucR
|
L-fucose utilization transcriptional regulator FucR, DeoR family
|
||
|
Position: -70
Score: 4.5 Sequence: TTGAAAACGAATACAA
Locus tag: SP_2157
Name: fucZ Funciton: Lactaldehyde dehydrogenase involved in fucose or rhamnose utilization (EC 1.2.1.22) |
|||
|
fucZ
|
Lactaldehyde dehydrogenase involved in fucose or rhamnose utilization (EC 1.2.1.22)
|
||
|
Position: -38
Score: 4.6 Sequence: ATGTAATCGTTATCAA
Locus tag: SP_0090
Name: msmX Funciton: Multiple sugar ABC transporter, membrane-spanning permease protein MsmF
Locus tag: SP_0091
Name: msmY Funciton: Multiple sugar ABC transporter, membrane-spanning permease protein MsmG
Locus tag: SP_0092
Name: msmZ Funciton: Multiple sugar ABC transporter, substrate-binding protein |
|||
|
msmX
|
Multiple sugar ABC transporter, membrane-spanning permease protein MsmF
|
||
|
msmY
|
Multiple sugar ABC transporter, membrane-spanning permease protein MsmG
|
||
|
msmZ
|
Multiple sugar ABC transporter, substrate-binding protein
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |