Regulon of CcpA in Lactococcus lactis subsp. lactis Il1403
| Regulator type: | Transcription factor |
| TF locus tag: | L0143 |
| Regulator family: | LacI |
| Regulation mode: | |
| Biological process: | Global catabolite repression |
| Effector: | Fructose-1,6-bisphosphate; HPr, phosphocarrier protein |
| Regulog: | CcpA - Streptococcaceae |
| Statistics of regulated genes: | |
| - Genes | 54 |
| - Operons | 31 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Streptococcaceae
- By trascription factor - CcpA
- By TF family - LacI
- By effector - Fructose-1,6-bisphosphate
- By effector - HPr, phosphocarrier protein
- By pathway - Global catabolite repression
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -123
Score: 3.8 Sequence: ATGTGAGCGCTTTACT
Locus tag: L54021
Name: fbp Funciton: Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11) |
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fbp
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Fructose-1,6-bisphosphatase, Bacillus type (EC 3.1.3.11)
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Position: -173
Score: 4.1 Sequence: ATGAAAACCATTTTTA
Position: -137
Score: 4.4 Sequence: CTGTAAACCTTTTCAA
Locus tag: L96847
Name: pepQ Funciton: Xaa-Pro dipeptidase (EC 3.4.13.9) |
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pepQ
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Xaa-Pro dipeptidase (EC 3.4.13.9)
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Position: -51
Score: 4.5 Sequence: TTGTAAACGATTCCAA
Locus tag: L0329
Name: arcA Funciton: Arginine deiminase (EC 3.5.3.6)
Locus tag: L0109
Name: arcB Funciton: Ornithine carbamoyltransferase (EC 2.1.3.3) |
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arcA
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Arginine deiminase (EC 3.5.3.6)
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arcB
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Ornithine carbamoyltransferase (EC 2.1.3.3)
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Position: -184
Score: 4.2 Sequence: TAGAAAACCCTTGCAA
Position: -143
Score: 4.4 Sequence: ATGAAAACGTTTCATA
Locus tag: L0002
Name: pfk Funciton: 6-phosphofructokinase (EC 2.7.1.11)
Locus tag: L0003
Name: pyk Funciton: Pyruvate kinase (EC 2.7.1.40) |
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pfk
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6-phosphofructokinase (EC 2.7.1.11)
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pyk
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Pyruvate kinase (EC 2.7.1.40)
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Position: -62
Score: 4.4 Sequence: ATGAAAACCGTTTCTA
Locus tag: L0043
Name: tkt Funciton: Transketolase (EC 2.2.1.1) |
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tkt
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Transketolase (EC 2.2.1.1)
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Position: -87
Score: 4.3 Sequence: ATGAAAACATTTGCAA
Locus tag: L1762179
Name: manL Funciton: PTS system, mannose-specific IIAB components
Locus tag: L146623
Name: manM Funciton: PTS system, mannose-specific IIC component (EC 2.7.1.69)
Locus tag: L147466
Name: manN Funciton: PTS system, mannose-specific IID component (EC 2.7.1.69)
Locus tag: L148513
Name: manO Funciton: Putative regulator of the mannose operon, ManO |
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manL
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PTS system, mannose-specific IIAB components
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manM
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PTS system, mannose-specific IIC component (EC 2.7.1.69)
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manN
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PTS system, mannose-specific IID component (EC 2.7.1.69)
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manO
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Putative regulator of the mannose operon, ManO
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Position: -30
Score: 4.3 Sequence: AATAAAACGCATACAT
Locus tag: L0224
Name: ackA Funciton: Acetate kinase (EC 2.7.2.1) |
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ackA
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Acetate kinase (EC 2.7.2.1)
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Position: -129
Score: 4.5 Sequence: TTGAAAAGGTTTTTAT
Locus tag: L73818
Name: ackA Funciton: Acetate kinase (EC 2.7.2.1) |
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ackA
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Acetate kinase (EC 2.7.2.1)
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Position: -106
Score: 4.5 Sequence: ATAAAAACGATTTCAG
Locus tag: L47971
Name: fruR2 Funciton: Predicted fructose utilization transcriptional regulator FruR2, RpiR family |
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fruR2
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Predicted fructose utilization transcriptional regulator FruR2, RpiR family
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Position: -88
Score: 4.4 Sequence: ATGTAAAAGCTTACAA
Locus tag: L33416
Name: mtlD Funciton: Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17) |
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mtlD
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Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)
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Position: -68
Score: 4.1 Sequence: TTTAATACGCTTACAG
Locus tag: L66222
Name: coaA Funciton: Pantothenate kinase (EC 2.7.1.33) |
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coaA
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Pantothenate kinase (EC 2.7.1.33)
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Position: -117
Score: 4.1 Sequence: ATAAAAGGGCTTACAG
Locus tag: L0011
Name: gpmA Funciton: 2,3-bisphosphoglycerate-dependent phosphoglycerate (EC 5.4.2.1) |
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gpmA
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2,3-bisphosphoglycerate-dependent phosphoglycerate (EC 5.4.2.1)
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Position: -95
Score: 4.2 Sequence: ATGTGAACGCTTAAAA
Locus tag: L108994
Name: udk Funciton: Uridine kinase (EC 2.7.1.48) [C1] |
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udk
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Uridine kinase (EC 2.7.1.48) [C1]
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Position: -95
Score: 4.4 Sequence: TAGAAAACGCTTCAAA
Position: -73
Score: 4.2 Sequence: ATGAGATCGCTATCAA
Locus tag: L121426
Name: ascB Funciton: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
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ascB
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6-phospho-beta-glucosidase (EC 3.2.1.86)
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Position: -100
Score: 4.4 Sequence: AATAAAGCGGTTACTT
Locus tag: L0009
Name: fbaA Funciton: Fructose-bisphosphate aldolase class II (EC 4.1.2.13) |
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fbaA
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Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
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Position: -29
Score: 4.3 Sequence: ATAAATACGCTTTCAG
Locus tag: L195318
Name: fdhC Funciton: Predicted formate transporter |
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fdhC
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Predicted formate transporter
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Position: -93
Score: 4.4 Sequence: TTGAAAAGGTTTACAG
Position: -57
Score: 4.1 Sequence: TAAAAATGGTTTTCAT
Locus tag: L0143
Name: ccpA Funciton: Carbon catabolism global transcriptional regulator CcpA, LacI family |
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ccpA
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Carbon catabolism global transcriptional regulator CcpA, LacI family
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Position: -32
Score: 4.7 Sequence: AATAAACCGTTTTCAT
Locus tag: L128695
Name: malE Funciton: Maltose/maltodextrin ABC transporter, substrate-binding protein
Locus tag: L128696
Name: malF Funciton: Maltose/maltodextrin ABC transporter, permease protein 1
Locus tag: L128697
Name: malG Funciton: Maltose/maltodextrin ABC transporter, permease protein 2 |
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malE
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Maltose/maltodextrin ABC transporter, substrate-binding protein
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malF
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Maltose/maltodextrin ABC transporter, permease protein 1
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malG
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Maltose/maltodextrin ABC transporter, permease protein 2
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Position: -133
Score: 4.4 Sequence: ATGAAAGCTGTTTCAT
Locus tag: L32389
Name: raiA Funciton: Ribosome-associated protein Y |
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raiA
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Ribosome-associated protein Y
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Position: -64
Score: 4.3 Sequence: CTGAAACCGCTTTTTT
Locus tag: L11851
Name: ywcC Funciton: 6-phosphogluconolactonase (EC 3.1.1.31) |
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ywcC
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6-phosphogluconolactonase (EC 3.1.1.31)
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Position: -43
Score: 5.1 Sequence: AAGAAAGCGTTTACAA
Locus tag: L55758
Name: adhB1 Funciton: Alcohol dehydrogenase (EC 1.1.1.1) |
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adhB1
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Alcohol dehydrogenase (EC 1.1.1.1)
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Position: -64
Score: 4.5 Sequence: ATGAAAACGGATACAA
Locus tag: L0145
Name: rbsR Funciton: Ribose utilization transcriptional regulator, LacI family
Locus tag: L86157
Name: rbsK Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: L85737
Name: rbsD Funciton: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)
Locus tag: L84240
Name: rbsA Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
Locus tag: L83296
Name: rbsC Funciton: Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
Locus tag: L82310
Name: rbsB Funciton: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) |
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rbsR
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Ribose utilization transcriptional regulator, LacI family
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rbsK
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Ribokinase (EC 2.7.1.15)
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rbsD
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Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)
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rbsA
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Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
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rbsC
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Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1)
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rbsB
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Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
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Position: -156
Score: 5.1 Sequence: ATGAAAACGTTTTAAA
Locus tag: L57408
Name: pfl Funciton: Pyruvate formate-lyase (EC 2.3.1.54) |
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pfl
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Pyruvate formate-lyase (EC 2.3.1.54)
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Position: -148
Score: 4.7 Sequence: AAATAAGCGCTTACAT
Locus tag: L0012
Name: pgi Funciton: Glucose-6-phosphate isomerase (EC 5.3.1.9) |
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pgi
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Glucose-6-phosphate isomerase (EC 5.3.1.9)
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Position: -56
Score: 5.1 Sequence: AAGAAAACGTTTTCTT
Locus tag: L93919
Name: malQ Funciton: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
Locus tag: L94405
Name: malQ Funciton: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
Locus tag: L95975
Name: glgC Funciton: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
Locus tag: L97131
Name: glgD Funciton: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
Locus tag: L98347
Name: glgA Funciton: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) |
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malQ
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4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
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malQ
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4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
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glgC
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Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
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glgD
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Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
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glgA
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Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
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Position: -162
Score: 4.5 Sequence: ATGTAAACGATTTATA
Locus tag: L91456
Name: aat Funciton: Aspartate aminotransferase (EC 2.6.1.1) |
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aat
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Aspartate aminotransferase (EC 2.6.1.1)
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Position: -187
Score: 4.5 Sequence: TTGAAAACGCAATCAA
Position: -96
Score: 4.5 Sequence: AATAAAACGGTTACAA
Locus tag: L0154
Name: licT Funciton: Beta-glucoside bgl operon transcriptional antiterminator, BglG family
Locus tag: L90678
Name: bglP Funciton: Beta-glucoside-specific PTS system, IIBCA component (EC 2.7.1.69)
Locus tag: L89194
Name: bglH Funciton: 6-phospho-beta-glucosidase (EC 3.2.1.86) |
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licT
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Beta-glucoside bgl operon transcriptional antiterminator, BglG family
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bglP
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Beta-glucoside-specific PTS system, IIBCA component (EC 2.7.1.69)
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bglH
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6-phospho-beta-glucosidase (EC 3.2.1.86)
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Position: -135
Score: 4.2 Sequence: CTTCAAACGCTTACAA
Locus tag: L11729a
Name: atpE Funciton: ATP synthase C chain (EC 3.6.3.14) |
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atpE
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ATP synthase C chain (EC 3.6.3.14)
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Position: -25
Score: 4.2 Sequence: TTGTAAACGAATTCAG
Locus tag: L0031
Name: fruR Funciton: Fructose utilization transcriptional regulator FruR, DeoR family
Locus tag: L0032
Name: fruB Funciton: 1-phosphofructokinase (EC 2.7.1.56)
Locus tag: L185031
Name: fruA Funciton: Fructose-specific PTS system, IIABC component (EC 2.7.1.69) |
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fruR
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Fructose utilization transcriptional regulator FruR, DeoR family
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fruB
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1-phosphofructokinase (EC 2.7.1.56)
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fruA
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Fructose-specific PTS system, IIABC component (EC 2.7.1.69)
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Position: -129
Score: 4.9 Sequence: AAGAAAACGCTTTAAA
Locus tag: L117145
Name: butB Funciton: 2,3-butanediol dehydrogenase, R-alcohol forming, (R)- and (S)-acetoin-specific (EC 1.1.1.4)
Locus tag: L118271
Name: butA Funciton: 2,3-butanediol dehydrogenase, S-alcohol forming, (R)-acetoin-specific (EC 1.1.1.4) / Acetoin (diacetyl) reductase (EC 1.1.1.5) |
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butB
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2,3-butanediol dehydrogenase, R-alcohol forming, (R)- and (S)-acetoin-specific (EC 1.1.1.4)
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butA
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2,3-butanediol dehydrogenase, S-alcohol forming, (R)-acetoin-specific (EC 1.1.1.4) / Acetoin (diacetyl) reductase (EC 1.1.1.5)
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Position: -62
Score: 4.3 Sequence: AAGAAAGCGCAAACAT
Locus tag: L129753
Name: msmX Funciton: Multiple sugar ABC transporter, membrane-spanning permease protein MsmF
Locus tag: L128777
Name: msmY Funciton: Multiple sugar ABC transporter, membrane-spanning permease protein MsmG
Locus tag: L127223
Name: msmZ Funciton: Multiple sugar ABC transporter, substrate-binding protein |
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msmX
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Multiple sugar ABC transporter, membrane-spanning permease protein MsmF
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msmY
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Multiple sugar ABC transporter, membrane-spanning permease protein MsmG
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msmZ
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Multiple sugar ABC transporter, substrate-binding protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |