Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of CcpA in Lactococcus lactis subsp. cremoris SK11

Properties
Regulator type: Transcription factor
TF locus tag: LACR_1812
Regulator family: LacI
Regulation mode:
Biological process: Global catabolite repression
Effector: Fructose-1,6-bisphosphate; HPr, phosphocarrier protein
Regulog: CcpA - Streptococcaceae
Statistics of regulated genes:
- Genes 59
- Operons 32
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 968 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -68
Score: 4.1
Sequence: TTTAATACGCTTACAG
Locus tag: LACR_1533
Name: coaA
Funciton: Pantothenate kinase (EC 2.7.1.33)
LACR_1533
coaA
Pantothenate kinase (EC 2.7.1.33)
Position: -136
Score: 4.4
Sequence: CTGTAAACCTTTTCAA
Locus tag: LACR_1813
Name: pepQ
Funciton: Xaa-Pro dipeptidase (EC 3.4.13.9)
LACR_1813
pepQ
Xaa-Pro dipeptidase (EC 3.4.13.9)
Position: -167
Score: 3.8
Sequence: TATTTAGCGATTTTAT
Position: -71
Score: 4
Sequence: TTGTAAACGTGTGCAT
Locus tag: LACR_2298
Name: typA
Funciton: GTP-binding protein TypA/BipA
LACR_2298
typA
GTP-binding protein TypA/BipA
Position: -184
Score: 4.2
Sequence: TAGAAAACCCTTGCAA
Position: -143
Score: 4.4
Sequence: ATGAAAACGTTTCATA
Locus tag: LACR_1457
Name: pfk
Funciton: 6-phosphofructokinase (EC 2.7.1.11)
Locus tag: LACR_1456
Name: pyk
Funciton: Pyruvate kinase (EC 2.7.1.40)
LACR_1457
pfk
6-phosphofructokinase (EC 2.7.1.11)
LACR_1456
pyk
Pyruvate kinase (EC 2.7.1.40)
Position: -62
Score: 4
Sequence: ATGAAAACCGTTTTTA
Locus tag: LACR_1734
Name: tkt
Funciton: Transketolase (EC 2.2.1.1)
LACR_1734
tkt
Transketolase (EC 2.2.1.1)
Position: -87
Score: 4.3
Sequence: ATGAAAACATTTGCAA
Locus tag: LACR_1863
Name: manL
Funciton: PTS system, mannose-specific IIAB components
Locus tag: LACR_1864
Name: manM
Funciton: PTS system, mannose-specific IIC component (EC 2.7.1.69)
Locus tag: LACR_1865
Name: manN
Funciton: PTS system, mannose-specific IID component (EC 2.7.1.69)
Locus tag: LACR_1866
Name: manO
Funciton: Putative regulator of the mannose operon, ManO
LACR_1863
manL
PTS system, mannose-specific IIAB components
LACR_1864
manM
PTS system, mannose-specific IIC component (EC 2.7.1.69)
LACR_1865
manN
PTS system, mannose-specific IID component (EC 2.7.1.69)
LACR_1866
manO
Putative regulator of the mannose operon, ManO
Position: -89
Score: 4.4
Sequence: ATGTAAAAGCTTACAA
Locus tag: LACR_0030
Name: mtlD
Funciton: Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)
LACR_0030
mtlD
Mannitol-1-phosphate 5-dehydrogenase (EC 1.1.1.17)
Position: -52
Score: 4.1
Sequence: TTGGTAGCGGTTACAA
Locus tag: LACR_0027
Name: mtlA
Funciton: Mannitol-specific PTS system, IIBC component (EC 2.7.1.69)
Locus tag: LACR_0028
Name: mtlR
Funciton: Mannitol operon antiterminator, BglG family
Locus tag: LACR_0029
Name: mtlF
Funciton: Mannitol-specific PTS system, mannitol-specific IIA component (EC 2.7.1.69)
LACR_0027
mtlA
Mannitol-specific PTS system, IIBC component (EC 2.7.1.69)
LACR_0028
mtlR
Mannitol operon antiterminator, BglG family
LACR_0029
mtlF
Mannitol-specific PTS system, mannitol-specific IIA component (EC 2.7.1.69)
Position: -30
Score: 4.3
Sequence: AATAAAACGCATACAT
Locus tag: LACR_2294
Name: ackA
Funciton: Acetate kinase (EC 2.7.2.1)
LACR_2294
ackA
Acetate kinase (EC 2.7.2.1)
Position: -129
Score: 4.4
Sequence: ATGCAAACGCTTTTTA
Locus tag: LACR_2295
Name: ackA
Funciton: Acetate kinase (EC 2.7.2.1)
LACR_2295
ackA
Acetate kinase (EC 2.7.2.1)
Position: -109
Score: 4.2
Sequence: TATGAAGCGATTTCAT
Locus tag: LACR_2247
Name: fruR2
Funciton: Predicted fructose utilization transcriptional regulator FruR2, RpiR family
LACR_2247
fruR2
Predicted fructose utilization transcriptional regulator FruR2, RpiR family
Position: -118
Score: 4.1
Sequence: ATAAAAGGGCTTACAG
Locus tag: LACR_0382
Name: gpmA
Funciton: 2,3-bisphosphoglycerate-dependent phosphoglycerate (EC 5.4.2.1)
LACR_0382
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate (EC 5.4.2.1)
Position: -186
Score: 4.1
Sequence: TTAAAAACGCAATCAA
Position: -95
Score: 4.5
Sequence: AATAAAACGGTTACAA
Locus tag: LACR_1546
Name: licT
Funciton: Beta-glucoside bgl operon transcriptional antiterminator, BglG family
Locus tag: LACR_1544
Name: bglH
Funciton: 6-phospho-beta-glucosidase (EC 3.2.1.86)
LACR_1546
licT
Beta-glucoside bgl operon transcriptional antiterminator, BglG family
LACR_1544
bglH
6-phospho-beta-glucosidase (EC 3.2.1.86)
Position: -94
Score: 4.2
Sequence: ATGTGAACGCTTAAAA
Locus tag: LACR_1825
Name: udk
Funciton: Uridine kinase (EC 2.7.1.48) [C1]
LACR_1825
udk
Uridine kinase (EC 2.7.1.48) [C1]
Position: -100
Score: 4.4
Sequence: AATAAAGCGGTTACTT
Locus tag: LACR_2168
Name: fbaA
Funciton: Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
LACR_2168
fbaA
Fructose-bisphosphate aldolase class II (EC 4.1.2.13)
Position: -50
Score: 4.6
Sequence: CAGAAAACGTTTTAAT
Locus tag: LACR_0408
Name: yjbM
Funciton: GTP pyrophosphokinase (EC 2.7.6.5)
Locus tag: LACR_0409
Name: ppnK
Funciton: Predicted inorganic polyphosphate/ATP-NAD kinase
Locus tag: LACR_0410
Name: yjbO
Funciton: Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YjbO type
LACR_0408
yjbM
GTP pyrophosphokinase (EC 2.7.6.5)
LACR_0409
ppnK
Predicted inorganic polyphosphate/ATP-NAD kinase
LACR_0410
yjbO
Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YjbO type
Position: -28
Score: 4.3
Sequence: ATAAATACGCTTTCAG
Locus tag: LACR_1054
Name: fdhC
Funciton: Predicted formate transporter
LACR_1054
fdhC
Predicted formate transporter
Position: -163
Score: 4.1
Sequence: TTTAAAGGGCTTTATT
Position: -32
Score: 4.7
Sequence: AATAAACCGTTTTCAT
Locus tag: LACR_1853
Name: malE
Funciton: Maltose/maltodextrin ABC transporter, substrate-binding protein
Locus tag: LACR_1854
Name: malF
Funciton: Maltose/maltodextrin ABC transporter, permease protein 1
Locus tag: LACR_1855
Name: malG
Funciton: Maltose/maltodextrin ABC transporter, permease protein 2
LACR_1853
malE
Maltose/maltodextrin ABC transporter, substrate-binding protein
LACR_1854
malF
Maltose/maltodextrin ABC transporter, permease protein 1
LACR_1855
malG
Maltose/maltodextrin ABC transporter, permease protein 2
Position: -93
Score: 4.4
Sequence: TTGAAAAGGTTTACAG
Locus tag: LACR_1812
Name: ccpA
Funciton: Carbon catabolism global transcriptional regulator CcpA, LacI family
LACR_1812
ccpA
Carbon catabolism global transcriptional regulator CcpA, LacI family
Position: -133
Score: 4.4
Sequence: ATGAAAGCTGTTTCAT
Locus tag: LACR_0667
Name: raiA
Funciton: Ribosome-associated protein Y
LACR_0667
raiA
Ribosome-associated protein Y
Position: -64
Score: 4.6
Sequence: CTGAAAACGCTTTTTT
Locus tag: LACR_2456
Name: ywcC
Funciton: 6-phosphogluconolactonase (EC 3.1.1.31)
LACR_2456
ywcC
6-phosphogluconolactonase (EC 3.1.1.31)
Position: -64
Score: 4.5
Sequence: ATGAAAACGGATACAA
Locus tag: LACR_1803
Name: rbsR
Funciton: Ribose utilization transcriptional regulator, LacI family
Locus tag: LACR_1802
Name: rbsK
Funciton: Ribokinase (EC 2.7.1.15)
Locus tag: LACR_1801
Name: rbsD
Funciton: Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)
Locus tag: LACR_1800
Name: rbsA
Funciton: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
LACR_1803
rbsR
Ribose utilization transcriptional regulator, LacI family
LACR_1802
rbsK
Ribokinase (EC 2.7.1.15)
LACR_1801
rbsD
Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)
LACR_1800
rbsA
Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
Position: -44
Score: 4.6
Sequence: AAGAATGCGTTTACAA
Locus tag: LACR_1990
Name: adhB1
Funciton: Alcohol dehydrogenase (EC 1.1.1.1)
LACR_1990
adhB1
Alcohol dehydrogenase (EC 1.1.1.1)
Position: -156
Score: 5.1
Sequence: ATGAAAACGTTTTAAA
Locus tag: LACR_0691
Name: pfl
Funciton: Pyruvate formate-lyase (EC 2.3.1.54)
LACR_0691
pfl
Pyruvate formate-lyase (EC 2.3.1.54)
Position: -148
Score: 4
Sequence: AAATAAGTGCTTACAT
Locus tag: LACR_2470
Name: pgi
Funciton: Glucose-6-phosphate isomerase (EC 5.3.1.9)
LACR_2470
pgi
Glucose-6-phosphate isomerase (EC 5.3.1.9)
Position: 0
Score: 4.2
Sequence: ATGAAATTGCTTTTAA
Locus tag: LACR_C06
Name: null
Funciton: Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # PabAb
Locus tag: LACR_C07
Name: pabB
Funciton: Para-aminobenzoate synthase component I (EC 4.1.3.-); Anthranilate/para-aminobenzoate synthases component I/ Chorismate binding enzyme, putative
LACR_C06
Para-aminobenzoate synthase, amidotransferase component (EC 2.6.1.85) # PabAb
LACR_C07
pabB
Para-aminobenzoate synthase component I (EC 4.1.3.-); Anthranilate/para-aminobenzoate synthases component I/ Chorismate binding enzyme, putative
Position: -61
Score: 5.1
Sequence: AAGAAAACGTTTTCTT
Locus tag: LACR_0723
Name: malQ
Funciton: 4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
Locus tag: LACR_0724
Name: glgC
Funciton: Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
Locus tag: LACR_0726
Name: glgA
Funciton: Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
LACR_0723
malQ
4-alpha-glucanotransferase (amylomaltase) (EC 2.4.1.25)
LACR_0724
glgC
Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27)
LACR_0726
glgA
Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21)
Position: -162
Score: 4.5
Sequence: ATGTAAACGATTTATA
Locus tag: LACR_2317
Name: aat
Funciton: Aspartate aminotransferase (EC 2.6.1.1)
LACR_2317
aat
Aspartate aminotransferase (EC 2.6.1.1)
Position: -25
Score: 4.2
Sequence: TTGTAAACGAATTCAG
Locus tag: LACR_1031
Name: fruR
Funciton: Fructose utilization transcriptional regulator FruR, DeoR family
Locus tag: LACR_1032
Name: fruB
Funciton: 1-phosphofructokinase (EC 2.7.1.56)
Locus tag: LACR_1033
Name: fruA
Funciton: Fructose-specific PTS system, IIABC component (EC 2.7.1.69)
LACR_1031
fruR
Fructose utilization transcriptional regulator FruR, DeoR family
LACR_1032
fruB
1-phosphofructokinase (EC 2.7.1.56)
LACR_1033
fruA
Fructose-specific PTS system, IIABC component (EC 2.7.1.69)
Position: -115
Score: 4.1
Sequence: TGTTAAACGGTTTCAT
Locus tag: LACR_0133
Name: yscN
Funciton: Predicted oxidoreductase, aldo/keto reductase family
LACR_0133
yscN
Predicted oxidoreductase, aldo/keto reductase family
Position: -135
Score: 4.3
Sequence: TATCAAACGCTTACAA
Locus tag: LACR_1939
Name: atpE
Funciton: ATP synthase C chain (EC 3.6.3.14)
Locus tag: LACR_1938
Name: atpB
Funciton: ATP synthase A chain (EC 3.6.3.14)
Locus tag: LACR_1937
Name: atpF
Funciton: ATP synthase B chain (EC 3.6.3.14)
Locus tag: LACR_1936
Name: atpH
Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: LACR_1935
Name: atpA
Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: LACR_1934
Name: atpG
Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: LACR_1933
Name: atpD
Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: LACR_1932
Name: atpC
Funciton: ATP synthase epsilon chain (EC 3.6.3.14)
LACR_1939
atpE
ATP synthase C chain (EC 3.6.3.14)
LACR_1938
atpB
ATP synthase A chain (EC 3.6.3.14)
LACR_1937
atpF
ATP synthase B chain (EC 3.6.3.14)
LACR_1936
atpH
ATP synthase delta chain (EC 3.6.3.14)
LACR_1935
atpA
ATP synthase alpha chain (EC 3.6.3.14)
LACR_1934
atpG
ATP synthase gamma chain (EC 3.6.3.14)
LACR_1933
atpD
ATP synthase beta chain (EC 3.6.3.14)
LACR_1932
atpC
ATP synthase epsilon chain (EC 3.6.3.14)
Position: -123
Score: 4.3
Sequence: ATGAAAACGGTAAAAT
Locus tag: LACR_1946
Name: natA
Funciton: Na+ export ABC transporter, ATP-binding protein
Locus tag: LACR_1945
Name: natB
Funciton: Na+ export ABC transporter, permease protein
LACR_1946
natA
Na+ export ABC transporter, ATP-binding protein
LACR_1945
natB
Na+ export ABC transporter, permease protein
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