Regulon of PyrR in Clostridium botulinum A str. ATCC 3502

Properties
Regulator type:	RNA regulatory element
Name:	PyrR
RFAM:	RF00515
Regulation mode:
Biological process:	Pyrimidine metabolism
Effector:	PyrR
Regulog:	PyrR - Clostridiaceae
Under regulation:
- Genes	12
- Operons	5

Member of regulog collections

By taxonomy - Clostridiaceae
By RNA motif - PyrR
By effector - PyrR
By pathway - Pyrimidine metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -197 Score: 37.8 Sequence: TAGTACCTTTAAAAT... Locus tag: CBO2073 Name: codB Funciton: Cytosine/purine/uracil/thiamine/allantoin permease family protein Locus tag: CBO2072 Name: codA Funciton: Cytosine deaminase (EC 3.5.4.1)
	CBO2073	codB	Cytosine/purine/uracil/thiamine/allantoin permease family protein
	CBO2072	codA	Cytosine deaminase (EC 3.5.4.1)
Position: -119 Score: 29.8 Sequence: AAAGCCCTTTAAATG... Locus tag: CBO2821 Name: pyrR Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
	CBO2821	pyrR	Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
Position: -44 Score: 27.3 Sequence: GCATCTTTTAAAATA... Locus tag: CBO1479 Name: pyrP Funciton: Uracil permease
	CBO1479	pyrP	Uracil permease
Position: -237 Score: 42.1 Sequence: TTACCTTTAAAATGA... Locus tag: CBO1478 Name: pyrR Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
	CBO1478	pyrR	Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
Position: -195 Score: 37 Sequence: TAAGACCTTTAAAAT... Locus tag: CBO3241 Name: pyrB Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2) Locus tag: CBO3240 Name: pyrI Funciton: Aspartate carbamoyltransferase regulatory chain (PyrI) Locus tag: CBO3239 Name: pyrC Funciton: Dihydroorotase (EC 3.5.2.3) Locus tag: CBO3238 Name: pyrF Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) Locus tag: CBO3237 Name: pyrK Funciton: Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1) Locus tag: CBO3236 Name: pyrD Funciton: Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1) Locus tag: CBO3235 Name: pyrE Funciton: Orotate phosphoribosyltransferase (EC 2.4.2.10)
	CBO3241	pyrB	Aspartate carbamoyltransferase (EC 2.1.3.2)
	CBO3240	pyrI	Aspartate carbamoyltransferase regulatory chain (PyrI)
	CBO3239	pyrC	Dihydroorotase (EC 3.5.2.3)
	CBO3238	pyrF	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
	CBO3237	pyrK	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)
	CBO3236	pyrD	Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)
	CBO3235	pyrE	Orotate phosphoribosyltransferase (EC 2.4.2.10)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD