Regulon of PyrR in Clostridium novyi NT

Properties
Regulator type:	RNA regulatory element
Name:	PyrR
RFAM:	RF00515
Regulation mode:
Biological process:	Pyrimidine metabolism
Effector:	PyrR
Regulog:	PyrR - Clostridiaceae
Under regulation:
- Genes	9
- Operons	3

Member of regulog collections

By taxonomy - Clostridiaceae
By RNA motif - PyrR
By effector - PyrR
By pathway - Pyrimidine metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -215 Score: 55.4 Sequence: GATAATCTTTAATAC... Position: -86 Score: 43.8 Sequence: GATAACTTTTTAAAT... Locus tag: NT01CX_0192 Name: pyrP Funciton: Uracil permease
	NT01CX_0192	pyrP	Uracil permease
Position: -365 Score: 35.6 Sequence: AAAGTCCTTTAAGGT... Position: -245 Score: 50.9 Sequence: ATTAACCTTTAATTT... Locus tag: NT01CX_0383 Name: carA Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) Locus tag: NT01CX_0382 Name: carB Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
	NT01CX_0383	carA	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
	NT01CX_0382	carB	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Position: -180 Score: 33.2 Sequence: GCGTGCCTTTAATTC... Locus tag: NT01CX_0395 Name: pyrB Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2) Locus tag: NT01CX_0394 Name: pyrC Funciton: Dihydroorotase (EC 3.5.2.3) Locus tag: NT01CX_0393 Name: pyrF Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) Locus tag: NT01CX_0392 Name: pyrK Funciton: Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1) Locus tag: NT01CX_0391 Name: pyrD Funciton: Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1) Locus tag: NT01CX_0390 Name: pyrE Funciton: Orotate phosphoribosyltransferase (EC 2.4.2.10)
	NT01CX_0395	pyrB	Aspartate carbamoyltransferase (EC 2.1.3.2)
	NT01CX_0394	pyrC	Dihydroorotase (EC 3.5.2.3)
	NT01CX_0393	pyrF	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
	NT01CX_0392	pyrK	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)
	NT01CX_0391	pyrD	Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)
	NT01CX_0390	pyrE	Orotate phosphoribosyltransferase (EC 2.4.2.10)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD