Regulon of PyrR in Clostridium perfringens ATCC 13124

Properties
Regulator type:	RNA regulatory element
Name:	PyrR
RFAM:	RF00515
Regulation mode:
Biological process:	Pyrimidine metabolism
Effector:	PyrR
Regulog:	PyrR - Clostridiaceae
Under regulation:
- Genes	10
- Operons	4

Member of regulog collections

By taxonomy - Clostridiaceae
By RNA motif - PyrR
By effector - PyrR
By pathway - Pyrimidine metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -180 Score: 46.9 Sequence: AATAACCTTTAAATT... Locus tag: CPF_1387 Name: pyrB Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2) Locus tag: CPF_1385 Name: pyrC Funciton: Dihydroorotase (EC 3.5.2.3) Locus tag: CPF_1384 Name: pyrF Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) Locus tag: CPF_1383 Name: pyrK Funciton: Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1) Locus tag: CPF_1382 Name: pyrD Funciton: Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1) Locus tag: CPF_1381 Name: pyrE Funciton: Orotate phosphoribosyltransferase (EC 2.4.2.10)
	CPF_1387	pyrB	Aspartate carbamoyltransferase (EC 2.1.3.2)
	CPF_1385	pyrC	Dihydroorotase (EC 3.5.2.3)
	CPF_1384	pyrF	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
	CPF_1383	pyrK	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)
	CPF_1382	pyrD	Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)
	CPF_1381	pyrE	Orotate phosphoribosyltransferase (EC 2.4.2.10)
Position: -47 Score: 26.1 Sequence: AAACTTTTAATTTAG... Locus tag: CPF_1756 Name: pyrP Funciton: Uracil permease
	CPF_1756	pyrP	Uracil permease
Position: -207 Score: 30.6 Sequence: ACTATTCTTTAAAGA... Position: -84 Score: 38.1 Sequence: TTTACCTTTTTAAAT... Locus tag: CPF_1422 Name: pyrP Funciton: Uracil permease
	CPF_1422	pyrP	Uracil permease
Position: -283 Score: 29.2 Sequence: AATACACTTTAAATT... Locus tag: CPF_2898 Name: carA Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) Locus tag: CPF_2897 Name: carB Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
	CPF_2898	carA	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
	CPF_2897	carB	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD