Regulon of PyrR in Clostridium difficile 630
| Regulator type: | RNA regulatory element |
| Name: | PyrR |
| RFAM: | RF00515 |
| Regulation mode: | |
| Biological process: | Pyrimidine metabolism |
| Effector: | PyrR |
| Regulog: | PyrR - Clostridiaceae |
| Under regulation: | |
| - Genes | 9 |
| - Operons | 2 |
Member of regulog collections
- By taxonomy - Clostridiaceae
- By RNA motif - PyrR
- By effector - PyrR
- By pathway - Pyrimidine metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -261
Score: 32.6 Sequence: AAATTCCTTAAAGTA...
Position: -146
Score: 52 Sequence: AAAGTCTTTTAAACT...
Locus tag: CD3592
Name: pyrF Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
Locus tag: CD3591
Name: carA Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Locus tag: CD3590
Name: carB Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Locus tag: CD3589
Name: carA Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Locus tag: CD3588
Name: carB Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) |
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pyrF
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Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
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carA
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Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
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carB
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Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
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carA
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Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
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carB
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Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
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Position: -46
Score: 27.8 Sequence: ATACTTTTAATTTTA...
Locus tag: CD0184
Name: pyrB Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2)
Locus tag: CD0185
Name: pyrK Funciton: Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)
Locus tag: CD0186
Name: pyrD Funciton: Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)
Locus tag: CD0187
Name: pyrE Funciton: Orotate phosphoribosyltransferase (EC 2.4.2.10) |
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pyrB
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Aspartate carbamoyltransferase (EC 2.1.3.2)
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pyrK
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Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)
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pyrD
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Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)
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pyrE
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Orotate phosphoribosyltransferase (EC 2.4.2.10)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |