Regulon of PyrR in Clostridium difficile 630

Properties
Regulator type:	RNA regulatory element
Name:	PyrR
RFAM:	RF00515
Regulation mode:
Biological process:	Pyrimidine metabolism
Effector:	PyrR
Regulog:	PyrR - Clostridiaceae
Under regulation:
- Genes	9
- Operons	2

Member of regulog collections

By taxonomy - Clostridiaceae
By RNA motif - PyrR
By effector - PyrR
By pathway - Pyrimidine metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -261 Score: 32.6 Sequence: AAATTCCTTAAAGTA... Position: -146 Score: 52 Sequence: AAAGTCTTTTAAACT... Locus tag: CD3592 Name: pyrF Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) Locus tag: CD3591 Name: carA Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) Locus tag: CD3590 Name: carB Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) Locus tag: CD3589 Name: carA Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) Locus tag: CD3588 Name: carB Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
	CD3592	pyrF	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
	CD3591	carA	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
	CD3590	carB	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
	CD3589	carA	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
	CD3588	carB	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Position: -46 Score: 27.8 Sequence: ATACTTTTAATTTTA... Locus tag: CD0184 Name: pyrB Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2) Locus tag: CD0185 Name: pyrK Funciton: Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1) Locus tag: CD0186 Name: pyrD Funciton: Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1) Locus tag: CD0187 Name: pyrE Funciton: Orotate phosphoribosyltransferase (EC 2.4.2.10)
	CD0184	pyrB	Aspartate carbamoyltransferase (EC 2.1.3.2)
	CD0185	pyrK	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)
	CD0186	pyrD	Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)
	CD0187	pyrE	Orotate phosphoribosyltransferase (EC 2.4.2.10)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD