Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of PyrR in Clostridium kluyveri DSM 555

Properties
Regulator type: RNA regulatory element
Name: PyrR
RFAM: RF00515
Regulation mode:
Biological process: Pyrimidine metabolism
Effector: PyrR
Regulog: PyrR - Clostridiaceae
Under regulation:
- Genes 11
- Operons 3
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -216
Score: 31.5
Sequence: TACACTTTAAATTGG...
Locus tag: CKL_0649
Name: carA
Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
Locus tag: CKL_0650
Name: carB
Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
carA
Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
carB
Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)

Position: -119
Score: 42.7
Sequence: AATATCCTTTAAAAT...
Locus tag: CKL_1201
Name: pyrR
Funciton: Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
Locus tag: CKL_1200
Name: pyrP
Funciton: Uracil permease
pyrR
Uracil phosphoribosyltransferase (EC 2.4.2.9) / Pyrimidine operon regulatory protein PyrR
pyrP
Uracil permease

Position: -151
Score: 45.5
Sequence: CTGAACCTTTAAGAC...
Locus tag: CKL_3361
Name: pyrB
Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2)
Locus tag: CKL_3360
Name: pyrI
Funciton: Aspartate carbamoyltransferase regulatory chain (PyrI)
Locus tag: CKL_3359
Name: pyrC
Funciton: Dihydroorotase (EC 3.5.2.3)
Locus tag: CKL_3358
Name: pyrF
Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
Locus tag: CKL_3357
Name: pyrK
Funciton: Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)
Locus tag: CKL_3356
Name: pyrD
Funciton: Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)
Locus tag: CKL_3355
Name: pyrE
Funciton: Orotate phosphoribosyltransferase (EC 2.4.2.10)
pyrB
Aspartate carbamoyltransferase (EC 2.1.3.2)
pyrI
Aspartate carbamoyltransferase regulatory chain (PyrI)
pyrC
Dihydroorotase (EC 3.5.2.3)
pyrF
Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
pyrK
Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)
pyrD
Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)
pyrE
Orotate phosphoribosyltransferase (EC 2.4.2.10)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD