Regulon of PyrR in Clostridium butyricum 5521

Properties
Regulator type:	RNA regulatory element
Name:	PyrR
RFAM:	RF00515
Regulation mode:
Biological process:	Pyrimidine metabolism
Effector:	PyrR
Regulog:	PyrR - Clostridiaceae
Under regulation:
- Genes	12
- Operons	4

Member of regulog collections

By taxonomy - Clostridiaceae
By RNA motif - PyrR
By effector - PyrR
By pathway - Pyrimidine metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -79 Score: 27.1 Sequence: AGACATATTTTAATT... Locus tag: CBY_3673 Name: pyrP Funciton: Uracil permease
	CBY_3673	pyrP	Uracil permease
Position: -225 Score: 29 Sequence: GATGCACTTTAACTT... Locus tag: CBY_2289 Name: carA Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) Locus tag: CBY_2288 Name: carB Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
	CBY_2289	carA	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
	CBY_2288	carB	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
Position: -158 Score: 37 Sequence: AATAACCTTTAATTT... Locus tag: CBY_2768 Name: pyrB Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2) Locus tag: CBY_2767 Name: pyrI Funciton: Aspartate carbamoyltransferase regulatory chain (PyrI) Locus tag: CBY_2766 Name: pyrC Funciton: Dihydroorotase (EC 3.5.2.3) Locus tag: CBY_2765 Name: pyrF Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) Locus tag: CBY_2764 Name: pyrK Funciton: Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1) Locus tag: CBY_2763 Name: pyrD Funciton: Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1) Locus tag: CBY_2762 Name: pyrE Funciton: Orotate phosphoribosyltransferase (EC 2.4.2.10)
	CBY_2768	pyrB	Aspartate carbamoyltransferase (EC 2.1.3.2)
	CBY_2767	pyrI	Aspartate carbamoyltransferase regulatory chain (PyrI)
	CBY_2766	pyrC	Dihydroorotase (EC 3.5.2.3)
	CBY_2765	pyrF	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
	CBY_2764	pyrK	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)
	CBY_2763	pyrD	Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)
	CBY_2762	pyrE	Orotate phosphoribosyltransferase (EC 2.4.2.10)
Position: -231 Score: 29.8 Sequence: AGTCCTTTAAGTTAT... Locus tag: CBY_1339 Name: codB Funciton: Cytosine/purine/uracil/thiamine/allantoin permease family protein Locus tag: CBY_1340 Name: codA Funciton: Cytosine deaminase (EC 3.5.4.1)
	CBY_1339	codB	Cytosine/purine/uracil/thiamine/allantoin permease family protein
	CBY_1340	codA	Cytosine deaminase (EC 3.5.4.1)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD