Regulon of PyrR in Clostridium beijerincki NCIMB 8052

Properties
Regulator type:	RNA regulatory element
Name:	PyrR
RFAM:	RF00515
Regulation mode:
Biological process:	Pyrimidine metabolism
Effector:	PyrR
Regulog:	PyrR - Clostridiaceae
Under regulation:
- Genes	10
- Operons	3

Member of regulog collections

By taxonomy - Clostridiaceae
By RNA motif - PyrR
By effector - PyrR
By pathway - Pyrimidine metabolism

Regulated operons
	Locus Tag	Name	Function
Position: -38 Score: 29.4 Sequence: TTTTAATTTAGTTCA... Locus tag: Cbei_1715 Name: pyrP Funciton: Uracil permease
	Cbei_1715	pyrP	Uracil permease
Position: -165 Score: 37.4 Sequence: TAACCTTTAATTTGA... Locus tag: Cbei_1000 Name: pyrB Funciton: Aspartate carbamoyltransferase (EC 2.1.3.2) Locus tag: Cbei_1001 Name: pyrI Funciton: Aspartate carbamoyltransferase regulatory chain (PyrI) Locus tag: Cbei_1002 Name: pyrC Funciton: Dihydroorotase (EC 3.5.2.3) Locus tag: Cbei_1003 Name: pyrF Funciton: Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) Locus tag: Cbei_1004 Name: pyrK Funciton: Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1) Locus tag: Cbei_1005 Name: pyrD Funciton: Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1) Locus tag: Cbei_1006 Name: pyrE Funciton: Orotate phosphoribosyltransferase (EC 2.4.2.10)
	Cbei_1000	pyrB	Aspartate carbamoyltransferase (EC 2.1.3.2)
	Cbei_1001	pyrI	Aspartate carbamoyltransferase regulatory chain (PyrI)
	Cbei_1002	pyrC	Dihydroorotase (EC 3.5.2.3)
	Cbei_1003	pyrF	Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23)
	Cbei_1004	pyrK	Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1)
	Cbei_1005	pyrD	Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1)
	Cbei_1006	pyrE	Orotate phosphoribosyltransferase (EC 2.4.2.10)
Position: -232 Score: 33.9 Sequence: TACACTTTAACTTGG... Locus tag: Cbei_0028 Name: carA Funciton: Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) Locus tag: Cbei_0029 Name: carB Funciton: Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)
	Cbei_0028	carA	Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)
	Cbei_0029	carB	Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD