Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Lysine in Clostridium difficile 630

Properties
Regulator type: RNA regulatory element
Name: Lysine
RFAM: RF00168
Regulation mode:
Biological process: Lysine biosynthesis
Effector: Lysine
Regulog: Lysine - Clostridiaceae
Under regulation:
- Genes 8
- Operons 4
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -309
Score: 111.9
Sequence: AGATTGAGGTAGAGG...
Locus tag: CD3100
Name: COG1288
Funciton: C4-dicarboxylate anaerobic carrier-like
COG1288
C4-dicarboxylate anaerobic carrier-like

Position: -319
Score: 101.8
Sequence: AGAAGGGTAGAGGCG...
Locus tag: CD1655
Name: lysW
Funciton: Predicted lysine transporter, NhaC family
lysW
Predicted lysine transporter, NhaC family

Position: -346
Score: 99.8
Sequence: CCTAGGGTAGAGGTA...
Locus tag: CD3224
Name: asd
Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: CD3225
Name: dapA
Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: CD3226
Name: dapB
Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: CD3227
Name: dapD
Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
asd
Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
dapA
Dihydrodipicolinate synthase (EC 4.2.1.52)
dapB
Dihydrodipicolinate reductase (EC 1.3.1.26)
dapD
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)

Position: -251
Score: 100.5
Sequence: AGCCTAGGGTAGAGG...
Locus tag: CD2054
Name: lysC
Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: CD2053
Name: lysA
Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20)
lysC
Aspartokinase (EC 2.7.2.4)
lysA
Diaminopimelate decarboxylase (EC 4.1.1.20)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD