Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Lysine in Clostridium hiranonis DSM 13275

Properties
Regulator type: RNA regulatory element
Name: Lysine
RFAM: RF00168
Regulation mode:
Biological process: Lysine biosynthesis
Effector: Lysine
Regulog: Lysine - Clostridiaceae
Under regulation:
- Genes 7
- Operons 3
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -393
Score: 88.9
Sequence: TAACCTGCGTAGAGG...
Locus tag: CLOHIR_00818
Name: asd
Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: CLOHIR_00817
Name: dapA
Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: CLOHIR_00816
Name: dapB
Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: CLOHIR_00815
Name: dapD
Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
asd
Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
dapA
Dihydrodipicolinate synthase (EC 4.2.1.52)
dapB
Dihydrodipicolinate reductase (EC 1.3.1.26)
dapD
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)

Position: -275
Score: 94.3
Sequence: TAAATGATAGAGGCG...
Locus tag: CLOHIR_01339
Name: lysW
Funciton: Predicted lysine transporter, NhaC family
lysW
Predicted lysine transporter, NhaC family

Position: -300
Score: 81.7
Sequence: ACCAAGGTAGAGGCG...
Locus tag: CLOHIR_01388
Name: lysC
Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: CLOHIR_01389
Name: lysA
Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20)
lysC
Aspartokinase (EC 2.7.2.4)
lysA
Diaminopimelate decarboxylase (EC 4.1.1.20)
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Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD