Regulon of Lysine in Clostridium bartlettii DSM 16795
| Regulator type: | RNA regulatory element |
| Name: | Lysine |
| RFAM: | RF00168 |
| Regulation mode: | |
| Biological process: | Lysine biosynthesis |
| Effector: | Lysine |
| Regulog: | Lysine - Clostridiaceae |
| Under regulation: | |
| - Genes | 7 |
| - Operons | 3 |
Member of regulog collections
- By taxonomy - Clostridiaceae
- By RNA motif - Lysine
- By effector - Lysine
- By pathway - Lysine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -263
Score: 97.4 Sequence: AGTAAGGTAGAGGTG...
Locus tag: CLOBAR_01794
Name: lysW Funciton: Predicted lysine transporter, NhaC family |
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lysW
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Predicted lysine transporter, NhaC family
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Position: -341
Score: 99.3 Sequence: TAACCTAAGTAGAGG...
Locus tag: CLOBAR_00365
Name: asd Funciton: Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
Locus tag: CLOBAR_00364
Name: dapA Funciton: Dihydrodipicolinate synthase (EC 4.2.1.52)
Locus tag: CLOBAR_00363
Name: dapB Funciton: Dihydrodipicolinate reductase (EC 1.3.1.26)
Locus tag: CLOBAR_00362
Name: dapD Funciton: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89) |
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asd
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Aspartate-semialdehyde dehydrogenase (EC 1.2.1.11)
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dapA
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Dihydrodipicolinate synthase (EC 4.2.1.52)
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dapB
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Dihydrodipicolinate reductase (EC 1.3.1.26)
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dapD
|
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC 2.3.1.89)
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Position: -243
Score: 86.2 Sequence: AACCTAGGGTAGAGG...
Locus tag: CLOBAR_01961
Name: lysC Funciton: Aspartokinase (EC 2.7.2.4)
Locus tag: CLOBAR_01960
Name: lysA Funciton: Diaminopimelate decarboxylase (EC 4.1.1.20) |
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lysC
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Aspartokinase (EC 2.7.2.4)
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lysA
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Diaminopimelate decarboxylase (EC 4.1.1.20)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |