Regulon of Cobalamin in Chloroflexus sp. Y-400-fl

Properties
Regulator type:	RNA regulatory element
Name:	Cobalamin
RFAM:	RF00174
Regulation mode:
Biological process:	Cobalamin biosynthesis
Effector:	Adenosylcobalamin
Regulog:	Cobalamin - Chloroflexia
Under regulation:
- Genes	14
- Operons	3

Member of regulog collections

By taxonomy - Chloroflexi
By RNA motif - Cobalamin
By effector - Adenosylcobalamin
By pathway - Cobalamin biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -267 Score: 37.6 Sequence: ATCAGACCTGTCCTG... Locus tag: Chy400_1314 Name: cbrX Funciton: LPXTG-motif cell wall anchor domain protein Locus tag: Chy400_1313 Name: cbrY Funciton: hypothetical secreted protein, a putative component of B12 transporter, anchored in the membrane Locus tag: Chy400_1312 Name: cobC Funciton: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73) Locus tag: Chy400_1311 Name: cobS Funciton: Cobalamin 5'-phosphate synthase Locus tag: Chy400_1310 Name: cbrV Funciton: Transmembrane component CbrV of energizing module of predicted cobalamin ECF transporter
	Chy400_1314	cbrX	LPXTG-motif cell wall anchor domain protein
	Chy400_1313	cbrY	hypothetical secreted protein, a putative component of B12 transporter, anchored in the membrane
	Chy400_1312	cobC	Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
	Chy400_1311	cobS	Cobalamin 5'-phosphate synthase
	Chy400_1310	cbrV	Transmembrane component CbrV of energizing module of predicted cobalamin ECF transporter
Position: -272 Score: 62.1 Sequence: CAAGTTCGTAGATCG... Locus tag: Chy400_2789 Name: btuR Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17) Locus tag: Chy400_2788 Name: cobN Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis Locus tag: Chy400_2787 Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) Locus tag: Chy400_2786 Name: cbiM Funciton: Substrate-specific component CbiM of cobalt ECF transporter Locus tag: Chy400_2785 Name: cbiN Funciton: Additional substrate-specific component CbiN of cobalt ECF transporter
	Chy400_2789	btuR	Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
	Chy400_2788	cobN	CobN component of cobalt chelatase involved in B12 biosynthesis
	Chy400_2787	cobT	Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
	Chy400_2786	cbiM	Substrate-specific component CbiM of cobalt ECF transporter
	Chy400_2785	cbiN	Additional substrate-specific component CbiN of cobalt ECF transporter
Position: -421 Score: 66.1 Sequence: CAAGTTCATATCGTC... Locus tag: Chy400_0336 Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF Locus tag: Chy400_0337 Name: cbiW Funciton: ferredoxin-like protein Locus tag: Chy400_0338 Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC Locus tag: Chy400_0339 Name: btuD Funciton: Vitamin B12 ABC transporter, ATP-binding component BtuD
	Chy400_0336	btuF	Vitamin B12 ABC transporter, B12-binding component BtuF
	Chy400_0337	cbiW	ferredoxin-like protein
	Chy400_0338	btuC	Vitamin B12 ABC transporter, permease component BtuC
	Chy400_0339	btuD	Vitamin B12 ABC transporter, ATP-binding component BtuD

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD