Regulon of Cobalamin in Chloroflexus sp. Y-400-fl
| Regulator type: | RNA regulatory element |
| Name: | Cobalamin |
| RFAM: | RF00174 |
| Regulation mode: | |
| Biological process: | Cobalamin biosynthesis |
| Effector: | Adenosylcobalamin |
| Regulog: | Cobalamin - Chloroflexia |
| Under regulation: | |
| - Genes | 14 |
| - Operons | 3 |
Member of regulog collections
- By taxonomy - Chloroflexi
- By RNA motif - Cobalamin
- By effector - Adenosylcobalamin
- By pathway - Cobalamin biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -267
Score: 37.6 Sequence: ATCAGACCTGTCCTG...
Locus tag: Chy400_1314
Name: cbrX Funciton: LPXTG-motif cell wall anchor domain protein
Locus tag: Chy400_1313
Name: cbrY Funciton: hypothetical secreted protein, a putative component of B12 transporter, anchored in the membrane
Locus tag: Chy400_1312
Name: cobC Funciton: Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
Locus tag: Chy400_1311
Name: cobS Funciton: Cobalamin 5'-phosphate synthase
Locus tag: Chy400_1310
Name: cbrV Funciton: Transmembrane component CbrV of energizing module of predicted cobalamin ECF transporter |
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cbrX
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LPXTG-motif cell wall anchor domain protein
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cbrY
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hypothetical secreted protein, a putative component of B12 transporter, anchored in the membrane
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cobC
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Alpha-ribazole-5'-phosphate phosphatase (EC 3.1.3.73)
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cobS
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Cobalamin 5'-phosphate synthase
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cbrV
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Transmembrane component CbrV of energizing module of predicted cobalamin ECF transporter
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Position: -272
Score: 62.1 Sequence: CAAGTTCGTAGATCG...
Locus tag: Chy400_2789
Name: btuR Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Locus tag: Chy400_2788
Name: cobN Funciton: CobN component of cobalt chelatase involved in B12 biosynthesis
Locus tag: Chy400_2787
Name: cobT Funciton: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
Locus tag: Chy400_2786
Name: cbiM Funciton: Substrate-specific component CbiM of cobalt ECF transporter
Locus tag: Chy400_2785
Name: cbiN Funciton: Additional substrate-specific component CbiN of cobalt ECF transporter |
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btuR
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Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
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cobN
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CobN component of cobalt chelatase involved in B12 biosynthesis
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cobT
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Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21)
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cbiM
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Substrate-specific component CbiM of cobalt ECF transporter
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cbiN
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Additional substrate-specific component CbiN of cobalt ECF transporter
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Position: -421
Score: 66.1 Sequence: CAAGTTCATATCGTC...
Locus tag: Chy400_0336
Name: btuF Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Chy400_0337
Name: cbiW Funciton: ferredoxin-like protein
Locus tag: Chy400_0338
Name: btuC Funciton: Vitamin B12 ABC transporter, permease component BtuC
Locus tag: Chy400_0339
Name: btuD Funciton: Vitamin B12 ABC transporter, ATP-binding component BtuD |
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btuF
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Vitamin B12 ABC transporter, B12-binding component BtuF
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cbiW
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ferredoxin-like protein
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btuC
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Vitamin B12 ABC transporter, permease component BtuC
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btuD
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Vitamin B12 ABC transporter, ATP-binding component BtuD
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |