Regulon of PhnF in Silicibacter TM1040
| Regulator type: | Transcription factor |
| TF locus tag: | TM1040_3704 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Phosphonate utilization |
| Effector: | |
| Regulog: | PhnF - Rhodobacterales |
| Statistics of regulated genes: | |
| - Genes | 7 |
| - Operons | 1 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By trascription factor - PhnF
- By TF family - GntR/Others
- By pathway - Phosphonate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -53
Score: 4.5 Sequence: TTGTCTAGTTGTATAGGACA
Locus tag: TM1040_3703
Name: phnG Funciton: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnG
Locus tag: TM1040_3702
Name: phnH Funciton: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnH
Locus tag: TM1040_3701
Name: phnI Funciton: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnI
Locus tag: TM1040_3700
Name: phnJ Funciton: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnJ
Locus tag: TM1040_3699
Name: phnK Funciton: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnK
Locus tag: TM1040_3698
Name: phnL Funciton: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnL
Locus tag: TM1040_3697
Name: phnN Funciton: Ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming) |
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phnG
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Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnG
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phnH
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Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnH
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phnI
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Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnI
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phnJ
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Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnJ
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phnK
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Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnK
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phnL
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Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnL
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phnN
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Ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |