Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of PhnF in Paracoccus denitrificans PD1222

Properties
Regulator type: Transcription factor
TF locus tag: Pden_4783
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Phosphonate utilization
Effector:
Regulog: PhnF - Rhodobacterales
Statistics of regulated genes:
- Genes 8
- Operons 2
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 23 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -53
Score: 5.6
Sequence: TTGTCTAGTTGTATAGAAAA
Position: -45
Score: 5.8
Sequence: TTGTATAGAAAACTAGACAA
Locus tag: Pden_4782
Name: phnG
Funciton: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnG
Locus tag: Pden_4781
Name: phnH
Funciton: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnH
Locus tag: Pden_4780
Name: phnI
Funciton: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnI
Locus tag: Pden_4779
Name: phnJ
Funciton: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnJ
Locus tag: Pden_4778
Name: phnK
Funciton: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnK
Locus tag: Pden_4777
Name: phnL
Funciton: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnL
Locus tag: Pden_4776
Name: phnN
Funciton: Ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming)
phnG
Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnG
phnH
Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnH
phnI
Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnI
phnJ
Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnJ
phnK
Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnK
phnL
Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnL
phnN
Ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming)

Position: -93
Score: 5.9
Sequence: TTGTCTAGTTTTCTATACAA
Position: -85
Score: 5.4
Sequence: TTTTCTATACAACTAGACAA
Locus tag: Pden_4783
Name: phnF
Funciton: Transcriptional regulator for phosphonate utilization, GntR family
phnF
Transcriptional regulator for phosphonate utilization, GntR family
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Regulated Genes [ Tab delimited format ] DOWNLOAD
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