Regulon of PhnF in Paracoccus denitrificans PD1222
| Regulator type: | Transcription factor |
| TF locus tag: | Pden_4783 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Phosphonate utilization |
| Effector: | |
| Regulog: | PhnF - Rhodobacterales |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 2 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhodobacterales
- By trascription factor - PhnF
- By TF family - GntR/Others
- By pathway - Phosphonate utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -53
Score: 5.6 Sequence: TTGTCTAGTTGTATAGAAAA
Position: -45
Score: 5.8 Sequence: TTGTATAGAAAACTAGACAA
Locus tag: Pden_4782
Name: phnG Funciton: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnG
Locus tag: Pden_4781
Name: phnH Funciton: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnH
Locus tag: Pden_4780
Name: phnI Funciton: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnI
Locus tag: Pden_4779
Name: phnJ Funciton: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnJ
Locus tag: Pden_4778
Name: phnK Funciton: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnK
Locus tag: Pden_4777
Name: phnL Funciton: Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnL
Locus tag: Pden_4776
Name: phnN Funciton: Ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming) |
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phnG
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Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnG
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phnH
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Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnH
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phnI
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Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnI
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phnJ
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Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnJ
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phnK
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Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnK
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phnL
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Methylphosphonate degradation complex, carbon-phosphorus lyase subunit PhnL
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phnN
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Ribose 1,5-bisphosphokinase activity (phosphoribosyl diphosphate forming)
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Position: -93
Score: 5.9 Sequence: TTGTCTAGTTTTCTATACAA
Position: -85
Score: 5.4 Sequence: TTTTCTATACAACTAGACAA
Locus tag: Pden_4783
Name: phnF Funciton: Transcriptional regulator for phosphonate utilization, GntR family |
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phnF
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Transcriptional regulator for phosphonate utilization, GntR family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |