Regulon of Rex in Streptomyces coelicolor A3(2)
| Regulator type: | Transcription factor |
| TF locus tag: | SCO3320 |
| Regulator family: | Rex |
| Regulation mode: | repressor |
| Biological process: | Energy metabolism |
| Effector: | NADH |
| Regulog: | Rex - Actinomycetales |
| Statistics of regulated genes: | |
| - Genes | 41 |
| - Operons | 10 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - Rex
- By TF family - Rex
- By effector - NADH
- By pathway - Energy metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -124
Score: 5 Sequence: TTGTGACCTGCTTCACAT
Locus tag: SCO4562
Name: nuoA Funciton: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
Locus tag: SCO4563
Name: nuoB Funciton: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
Locus tag: SCO4564
Name: nuoCD Funciton: NADH-ubiquinone oxidoreductase chain C, chainD (EC 1.6.5.3)
Locus tag: SCO4565
Name: nuoCD Funciton: NADH-ubiquinone oxidoreductase chain C, chainD (EC 1.6.5.3)
Locus tag: SCO4566
Name: nuoE Funciton: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
Locus tag: SCO4567
Name: nuoF Funciton: NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
Locus tag: SCO4568
Name: nuoG Funciton: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
Locus tag: SCO4569
Name: nuoH Funciton: NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
Locus tag: SCO4570
Name: nuoI Funciton: NADH-quinone oxidoreductase, chain I
Locus tag: SCO4571
Name: nuoJ Funciton: NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
Locus tag: SCO4572
Name: nuoK Funciton: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
Locus tag: SCO4573
Name: nuoL Funciton: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
Locus tag: SCO4574
Name: nuoM Funciton: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
Locus tag: SCO4575
Name: nuoN Funciton: NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3) |
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nuoA
|
NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
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nuoB
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NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
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nuoCD
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NADH-ubiquinone oxidoreductase chain C, chainD (EC 1.6.5.3)
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nuoCD
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NADH-ubiquinone oxidoreductase chain C, chainD (EC 1.6.5.3)
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nuoE
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NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
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nuoF
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NADH-ubiquinone oxidoreductase chain F (EC 1.6.5.3)
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nuoG
|
NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
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nuoH
|
NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3)
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nuoI
|
NADH-quinone oxidoreductase, chain I
|
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nuoJ
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NADH-ubiquinone oxidoreductase chain J (EC 1.6.5.3)
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nuoK
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NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
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nuoL
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NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
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nuoM
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NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
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nuoN
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NADH-ubiquinone oxidoreductase chain N (EC 1.6.5.3)
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Position: -61
Score: 5.9 Sequence: TCGTGAAAGCGTTCACAT
Locus tag: SCO5240
Name: whiB Funciton: WhiB-family transcriptional regulator involved in differentiation and sporulation |
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whiB
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WhiB-family transcriptional regulator involved in differentiation and sporulation
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Position: -37
Score: 4.5 Sequence: TTGTGCACCGTCGCACAA
Locus tag: SCO3101
Name: SCO3101 Funciton: putative lipoprotein
Locus tag: SCO3100
Name: mazG Funciton: Nucleoside triphosphate pyrophosphohydrolase MazG
Locus tag: SCO3099
Name: cyp16 Funciton: putative cytochrome P450 hydroxylase |
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SCO3101
|
putative lipoprotein
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mazG
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Nucleoside triphosphate pyrophosphohydrolase MazG
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cyp16
|
putative cytochrome P450 hydroxylase
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Position: -136
Score: 4.6 Sequence: TTGTGAAGGGGCGCACGA
Locus tag: SCO3092
Name: ndh Funciton: NADH dehydrogenase (EC 1.6.99.3) |
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ndh
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NADH dehydrogenase (EC 1.6.99.3)
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Position: -224
Score: 5 Sequence: AAGTGAATTCATTCACGA
Locus tag: SCO3547
Name: hppA Funciton: Pyrophosphate-energized proton pump (EC 3.6.1.1) |
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hppA
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Pyrophosphate-energized proton pump (EC 3.6.1.1)
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Position: -97
Score: 5.8 Sequence: TTGTGCACGCGTTCACAA
Locus tag: SCO3320
Name: rex Funciton: Redox-sensitive transcriptional regulator Rex
Locus tag: SCO3319
Name: hemA Funciton: Glutamyl-tRNA reductase (EC 1.2.1.70)
Locus tag: SCO3318
Name: hemC Funciton: Porphobilinogen deaminase (EC 2.5.1.61)
Locus tag: SCO3317
Name: hemD Funciton: Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75) |
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rex
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Redox-sensitive transcriptional regulator Rex
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hemA
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Glutamyl-tRNA reductase (EC 1.2.1.70)
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hemC
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Porphobilinogen deaminase (EC 2.5.1.61)
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hemD
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Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) / Uroporphyrinogen-III synthase (EC 4.2.1.75)
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Position: -16
Score: 4.9 Sequence: ATGCGAAACTTTTCACAT
Locus tag: SCO4472
Name: resA Funciton: Thiol:disulfide oxidoreductase related to ResA
Locus tag: SCO4473
Name: ccdA Funciton: Cytochrome c-type biogenesis protein CcdA (DsbD analog)
Locus tag: SCO4474
Name: resB Funciton: Ccs1/ResB-related putative cytochrome C-type biogenesis protein
Locus tag: SCO4475
Name: resC Funciton: Cytochrome c-type biogenesis protein CcsA/ResC |
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resA
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Thiol:disulfide oxidoreductase related to ResA
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ccdA
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Cytochrome c-type biogenesis protein CcdA (DsbD analog)
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resB
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Ccs1/ResB-related putative cytochrome C-type biogenesis protein
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resC
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Cytochrome c-type biogenesis protein CcsA/ResC
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Position: -147
Score: 5 Sequence: TTGTGATACGGTTCACGA
Locus tag: SCO5366
Name: atpI Funciton: ATP synthase protein I
Locus tag: SCO5367
Name: atpB Funciton: ATP synthase A chain (EC 3.6.3.14)
Locus tag: SCO5368
Name: atpE Funciton: ATP synthase C chain (EC 3.6.3.14)
Locus tag: SCO5369
Name: atpF Funciton: ATP synthase B chain (EC 3.6.3.14)
Locus tag: SCO5370
Name: atpH Funciton: ATP synthase delta chain (EC 3.6.3.14)
Locus tag: SCO5371
Name: atpA Funciton: ATP synthase alpha chain (EC 3.6.3.14)
Locus tag: SCO5372
Name: atpG Funciton: ATP synthase gamma chain (EC 3.6.3.14)
Locus tag: SCO5373
Name: atpD Funciton: ATP synthase beta chain (EC 3.6.3.14)
Locus tag: SCO5374
Name: atpC Funciton: ATP synthase epsilon chain (EC 3.6.3.14) |
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atpI
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ATP synthase protein I
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atpB
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ATP synthase A chain (EC 3.6.3.14)
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atpE
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ATP synthase C chain (EC 3.6.3.14)
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atpF
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ATP synthase B chain (EC 3.6.3.14)
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atpH
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ATP synthase delta chain (EC 3.6.3.14)
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atpA
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ATP synthase alpha chain (EC 3.6.3.14)
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atpG
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ATP synthase gamma chain (EC 3.6.3.14)
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atpD
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ATP synthase beta chain (EC 3.6.3.14)
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atpC
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ATP synthase epsilon chain (EC 3.6.3.14)
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Position: -109
Score: 5.9 Sequence: ATGTGAACGCGTTCACAA
Locus tag: SCO3945
Name: cydA Funciton: Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
Locus tag: SCO3946
Name: cydB Funciton: Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)
Locus tag: SCO3947
Name: cydCD Funciton: ABC transporter permease CydC / ATP-binding protein CydD |
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cydA
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Cytochrome d ubiquinol oxidase subunit I (EC 1.10.3.-)
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cydB
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Cytochrome d ubiquinol oxidase subunit II (EC 1.10.3.-)
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cydCD
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ABC transporter permease CydC / ATP-binding protein CydD
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Position: -100
Score: 4.7 Sequence: TTGTGAAAACTTTCACCC
Locus tag: SCO6168
Name: SC6C5.04c Funciton: hypothetical protein SCO6168 |
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SC6C5.04c
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hypothetical protein SCO6168
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |