Regulon of PsrA in Alcanivorax borkumensis SK2
| Regulator type: | Transcription factor |
| TF locus tag: | ABO_1016 |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Fatty acid degradation |
| Effector: | Oleate |
| Regulog: | PsrA - Oceanospirillales/Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 5 |
| - Operons | 4 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Oceanospirillales/Alteromonadales
- By trascription factor - PsrA
- By TF family - TetR
- By effector - Oleate
- By pathway - Fatty acid degradation
| Locus Tag | Name | Function | |
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Position: -251
Score: 5.5 Sequence: TTTCAAACAAGTGTTTAGAT
Locus tag: ABO_1101
Name: etfB Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: ABO_1102
Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit |
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etfB
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Electron transfer flavoprotein, beta subunit
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etfA
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Electron transfer flavoprotein, alpha subunit
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Position: -138
Score: 5.7 Sequence: TTTCAAACGCTTGTTTGACT
Locus tag: ABO_2102
Name: acdH4 Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3) |
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acdH4
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Acyl-CoA dehydrogenase (EC 1.3.99.3)
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Position: -233
Score: 5.4 Sequence: ATCTAAACACTTGTTTGAAA
Locus tag: ABO_1100
Name: etfD Funciton: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1) |
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etfD
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Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
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Position: -48
Score: 4.9 Sequence: GGGCAAACGTATGTTTGAAA
Position: -35
Score: 5.1 Sequence: TTTGAAACGTATGTTTCGAA
Locus tag: ABO_1016
Name: psrA Funciton: Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family |
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psrA
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Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |