Regulon of PsrA in Alcanivorax borkumensis SK2

Properties
Regulator type:	Transcription factor
TF locus tag:	ABO_1016
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Fatty acid degradation
Effector:	Oleate
Regulog:	PsrA - Oceanospirillales/Alteromonadales
Statistics of regulated genes:
- Genes	5
- Operons	4
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 67 sites [see more]

Member of regulog collections

By taxonomy - Oceanospirillales/Alteromonadales
By trascription factor - PsrA
By TF family - TetR
By effector - Oleate
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -251 Score: 5.5 Sequence: TTTCAAACAAGTGTTTAGAT Locus tag: ABO_1101 Name: etfB Funciton: Electron transfer flavoprotein, beta subunit Locus tag: ABO_1102 Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit
	ABO_1101	etfB	Electron transfer flavoprotein, beta subunit
	ABO_1102	etfA	Electron transfer flavoprotein, alpha subunit
Position: -138 Score: 5.7 Sequence: TTTCAAACGCTTGTTTGACT Locus tag: ABO_2102 Name: acdH4 Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
	ABO_2102	acdH4	Acyl-CoA dehydrogenase (EC 1.3.99.3)
Position: -233 Score: 5.4 Sequence: ATCTAAACACTTGTTTGAAA Locus tag: ABO_1100 Name: etfD Funciton: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
	ABO_1100	etfD	Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Position: -48 Score: 4.9 Sequence: GGGCAAACGTATGTTTGAAA Position: -35 Score: 5.1 Sequence: TTTGAAACGTATGTTTCGAA Locus tag: ABO_1016 Name: psrA Funciton: Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family
	ABO_1016	psrA	Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD