Regulon of PsrA in Hahella chejuensis KCTC 2396

Properties
Regulator type:	Transcription factor
TF locus tag:	HCH_02677
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Fatty acid degradation
Effector:	Oleate
Regulog:	PsrA - Oceanospirillales/Alteromonadales
Statistics of regulated genes:
- Genes	9
- Operons	7
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 67 sites [see more]

Member of regulog collections

By taxonomy - Oceanospirillales/Alteromonadales
By trascription factor - PsrA
By TF family - TetR
By effector - Oleate
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -200 Score: 5.5 Sequence: ATTCAAACAAGCGTTCGATT Locus tag: HCH_02532 Name: scp Funciton: Sterol-binding domain protein
	HCH_02532	scp	Sterol-binding domain protein
Position: -84 Score: 5 Sequence: CATAAAACGACTGTTTCAAA Position: -71 Score: 5.9 Sequence: TTTCAAACGAATGTTTTAAA Locus tag: HCH_05787 Name: null Funciton: hypothetical protein
	HCH_05787		hypothetical protein
Position: -402 Score: 5.7 Sequence: AaaCAAACgttTGTTTGAAT Locus tag: HCH_03950 Name: etfB Funciton: Electron transfer flavoprotein, beta subunit Locus tag: HCH_03949 Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit
	HCH_03950	etfB	Electron transfer flavoprotein, beta subunit
	HCH_03949	etfA	Electron transfer flavoprotein, alpha subunit
Position: -135 Score: 5.3 Sequence: AAGCAAACGTATGTTTCAAA Position: -122 Score: 5.9 Sequence: TTTCAAACACTTGTTTGATA Locus tag: HCH_05361 Name: acdH1 Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
	HCH_05361	acdH1	Acyl-CoA dehydrogenase (EC 1.3.99.3)
Position: -141 Score: 5.9 Sequence: ATTCAAACGAGCGTATGAAT Locus tag: HCH_04756 Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) Locus tag: HCH_04754 Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
	HCH_04756	fadB	Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
	HCH_04754	fadA	3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Position: -246 Score: 5.6 Sequence: ATTCAAACAAACGTTTGTTT Position: -242 Score: 5.2 Sequence: AAACAAACGTTTGTTTGAGT Locus tag: HCH_03954 Name: etfD Funciton: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
	HCH_03954	etfD	Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Position: -54 Score: 5.7 Sequence: TATCAAACGTATGTTTCAAA Position: -41 Score: 5.4 Sequence: TTTCAAACACTTGTTTGGAG Locus tag: HCH_02677 Name: psrA Funciton: Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family
	HCH_02677	psrA	Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD