Regulon of PsrA in Colwellia psychrerythraea 34H

Properties
Regulator type:	Transcription factor
TF locus tag:	CPS_1586
Regulator family:	TetR
Regulation mode:	repressor
Biological process:	Fatty acid degradation
Effector:	Oleate
Regulog:	PsrA - Alteromonadales
Statistics of regulated genes:
- Genes	10
- Operons	8
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 26 sites [see more]

Member of regulog collections

By taxonomy - Alteromonadales
By trascription factor - PsrA
By TF family - TetR
By effector - Oleate
By pathway - Fatty acid degradation

Regulated operons
	Locus Tag	Name	Function
Position: -163 Score: 5.6 Sequence: TTTAAAACACTTGTTTTAAA Locus tag: CPS_0393 Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) Locus tag: CPS_0392 Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
	CPS_0393	fadB	Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
	CPS_0392	fadA	3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
Position: -66 Score: 5.7 Sequence: ATTCAAACAAGTGTTTTAAT Locus tag: CPS_4476 Name: null Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
	CPS_4476		Acyl-CoA dehydrogenase (EC 1.3.99.3)
Position: -133 Score: 5.9 Sequence: ATTAAAACAAGCGTTTAAAT Locus tag: CPS_1189 Name: fadD1 Funciton: Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
	CPS_1189	fadD1	Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
Position: -186 Score: 5.1 Sequence: ATTCAAACTAATGTTTTAAT Locus tag: CPS_1191 Name: null Funciton: oxidoreductase, short-chain dehydrogenase/reductase family
	CPS_1191		oxidoreductase, short-chain dehydrogenase/reductase family
Position: -202 Score: 5.3 Sequence: TTTCAAACGTGCGTTTGATA Position: -183 Score: 5.7 Sequence: ATTCAAACAAGTGTTTGATA Locus tag: CPS_3687 Name: etfB Funciton: Electron transfer flavoprotein, beta subunit Locus tag: CPS_3688 Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit
	CPS_3687	etfB	Electron transfer flavoprotein, beta subunit
	CPS_3688	etfA	Electron transfer flavoprotein, alpha subunit
Position: -99 Score: 5.7 Sequence: TATCAAACACTTGTTTGAAT Position: -80 Score: 5.3 Sequence: TATCAAACGCACGTTTGAAA Locus tag: CPS_3686 Name: etfD Funciton: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
	CPS_3686	etfD	Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
Position: -149 Score: 5.4 Sequence: TTTTAAACAGGTGTTTAAAC Locus tag: CPS_1586 Name: psrA Funciton: Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family
	CPS_1586	psrA	Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family
Position: -80 Score: 5.7 Sequence: AATCAAACACCTGTTTGAAA Locus tag: CPS_1177 Name: acdH2 Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3)
	CPS_1177	acdH2	Acyl-CoA dehydrogenase (EC 1.3.99.3)

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